LOCUS       NM_001033410            2022 bp    mRNA    linear   ROD 06-AUG-2024
DEFINITION  Mus musculus ring finger protein 224 (Rnf224), mRNA.
ACCESSION   NM_001033410
VERSION     NM_001033410.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2022)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL732309.9.
            
            On Jan 6, 2022 this sequence version replaced NM_001033410.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK146725.1, BY739560.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849376, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-156               AL732309.9         129264-129419       c
            157-2022            AL732309.9         127107-128972       c
FEATURES             Location/Qualifiers
     source          1..2022
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 17.09 cM"
     gene            1..2022
                     /gene="Rnf224"
                     /gene_synonym="Gm757"
                     /note="ring finger protein 224"
                     /db_xref="GeneID:329360"
                     /db_xref="MGI:MGI:2685603"
     exon            1..156
                     /gene="Rnf224"
                     /gene_synonym="Gm757"
                     /inference="alignment:Splign:2.1.0"
     exon            157..2022
                     /gene="Rnf224"
                     /gene_synonym="Gm757"
                     /inference="alignment:Splign:2.1.0"
     CDS             158..628
                     /gene="Rnf224"
                     /gene_synonym="Gm757"
                     /codon_start=1
                     /product="RING finger protein 224"
                     /protein_id="NP_001028582.1"
                     /db_xref="GeneID:329360"
                     /db_xref="MGI:MGI:2685603"
                     /translation="MLQPEGLYALEEGTALTASRNDCIICYSAYDLSVHLPRRLYCGH
                     TFCQACMQRLDMPAHEQHWIPCPQCRQSTPVPRGGVTMLDLDLAAFLAVKAEREPSKI
                     EPRSSVPLKISTTITQQPAGLYPTLGPQPHFPQPGCCCWGWGRLCWYPPGNPEV"
     regulatory      2002..2007
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rnf224"
                     /gene_synonym="Gm757"
                     /note="hexamer: ATTAAA"
     polyA_site      2022
                     /gene="Rnf224"
                     /gene_synonym="Gm757"
                     /note="major polyA site"
ORIGIN      
        1 actctagctt gatgctgcca ccacctgcct cctgccgtct tgcccgtgta gatagtaatg
       61 cgaacccaag gagggagcca tgaggtgtcc agggtcccca ccccctcctc caacaatcct
      121 ctagcttgga atagctttct ggtgaagcgg atgcaggatg ctgcagcctg aaggcctcta
      181 tgccttggag gaggggacag ccctgacagc ctcacggaat gactgcatca tctgctactc
      241 tgcctatgac ctctcagtac acttgcctcg acgtctctac tgtggccaca ccttctgcca
      301 ggcatgcatg cagcggctgg atatgccagc ccacgaacaa cactggatcc cctgtccaca
      361 gtgccgacaa agtacccctg tgccccgtgg aggggtgacc atgttggacc tggacctggc
      421 tgccttcttg gcagtcaaag ctgaacggga accatcaaaa atagaaccca ggtcctctgt
      481 ccccctcaaa atcagcacta ccatcactca gcagccagct ggactctacc ccaccttggg
      541 cccccaaccc cacttccctc agcctggatg ctgctgctgg ggttggggaa gactgtgctg
      601 gtacccccct gggaaccccg aagtctaaat tctggccatc cccaccccca caaaggaaac
      661 tctgcttagt agtttgtcta ccttggatcg tacacaatgc aaacagaaca gcctgctagc
      721 aagacaactc tcctatgact gtacacaacc aaatatagtg gtgtcacctt gaccaggaac
      781 atttcgagcc atagcctaag gtcagagtca atggccatgg tgccataaga ctgcacacta
      841 ggctggggaa ctcccattct actggcctag attctcgtac cccaaagtag tctgactctg
      901 gctagccaac atcctgctgt ctatgcctct tgtaaaccca ggactcagct gagagaatgg
      961 ctcccaagag tctgtggggg tgagtgtatg ggcctgggca gggccaggct atgggtgtat
     1021 gtaagtggct ggcatcagag taggtcttcc tctctataaa catccagagg tatgaatcag
     1081 gagcgagggc aagttgcctc ctctattcct ggagtctcat gtgttactgt ctatccaaca
     1141 atgctcactg agctctgttc tctgtctgca gcacaggtac caaagagggg tgcaatggag
     1201 ggctagctct gacaaggggt cttgactgag atctcactgc tcattatcct atctcaagac
     1261 tctcagcttt catctaccac tggtgactat aatacagacc ctttagtagg tgatagaggc
     1321 tacagatgac tgacaacccc aagaccaaag ctgtaagctt ccatcctgct agaaaggctg
     1381 tattcaggag gccctgggag gagcctcctg ggcagtggat gggaggctag agaatttgct
     1441 gaatagacat taagaagact ccttccctgg gcaaagtccc tcaagcagct aggttgggca
     1501 gtgagcagag aaggctgctg gaacttgcag gggagggcct agtcctcatc ccaaggtctg
     1561 gaaagggcct gatccacaaa aagggacatt tcacatgcat gtgcagacag gacagtgctc
     1621 aactgggaaa agatactcag ataagggtcg ggcaatgagc tctgcccacc tctttccatg
     1681 cagatagaga ctccaagtcc tggaccccct gctgggctcc ccagaaagcc cttctagatc
     1741 tggccccacc cttaaactca gatttgaatc tgctgacctc agagcctccg tgcattccca
     1801 ggccacctga ggaaatccat cttccacgcc cacctggtgc aaagggcttc tctcttgtct
     1861 ctctgtcagg tgctgagatg aacatgataa ggtttgcaga gttcgcaacc cagaaggacg
     1921 gagaagggca actttcttgt ggggtttcta ggcagcccca gccagaatga cagcatcctg
     1981 cctgggtggt gtagaatgtc cattaaatgt atccaatgcc ta
//
