LOCUS       NM_001033135            2440 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus ring finger protein 149 (Rnf149), mRNA.
ACCESSION   NM_001033135 XM_129803
VERSION     NM_001033135.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Legesse,A., Kaushansky,N., Braunstein,I., Saad,H., Lederkremer,G.,
            Navon,A. and Stanhill,A.
  TITLE     The role of RNF149 in the pre-emptive quality control substrate
            ubiquitination
  JOURNAL   Commun Biol 6 (1), 385 (2023)
   PUBMED   37031316
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  AUTHORS   Hong,S.W., Jin,D.H., Shin,J.S., Moon,J.H., Na,Y.S., Jung,K.A.,
            Kim,S.M., Kim,J.C., Kim,K.P., Hong,Y.S., Lee,J.L., Choi,E.K.,
            Lee,J.S. and Kim,T.W.
  TITLE     Ring finger protein 149 is an E3 ubiquitin ligase active on
            wild-type v-Raf murine sarcoma viral oncogene homolog B1 (BRAF)
  JOURNAL   J Biol Chem 287 (28), 24017-24025 (2012)
   PUBMED   22628551
REFERENCE   3  (bases 1 to 2440)
  AUTHORS   Powles,N., Babbs,C., Ficker,M., Schimmang,T. and Maconochie,M.
  TITLE     Identification and analysis of genes from the mouse otic vesicle
            and their association with developmental subprocesses through in
            situ hybridization
  JOURNAL   Dev Biol 268 (1), 24-38 (2004)
   PUBMED   15031102
REFERENCE   4  (bases 1 to 2440)
  AUTHORS   Borchers,A.G., Hufton,A.L., Eldridge,A.G., Jackson,P.K.,
            Harland,R.M. and Baker,J.C.
  TITLE     The E3 ubiquitin ligase GREUL1 anteriorizes ectoderm during Xenopus
            development
  JOURNAL   Dev Biol 251 (2), 395-408 (2002)
   PUBMED   12435366
REFERENCE   5  (bases 1 to 2440)
  AUTHORS   Rouger,K., Le Cunff,M., Steenman,M., Potier,M.C., Gibelin,N.,
            Dechesne,C.A. and Leger,J.J.
  TITLE     Global/temporal gene expression in diaphragm and hindlimb muscles
            of dystrophin-deficient (mdx) mice
  JOURNAL   Am J Physiol Cell Physiol 283 (3), C773-C784 (2002)
   PUBMED   12176734
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY743657.1, BF018252.1, CR759684.1, AK005523.1 and BE627920.1.
            
            [WARNING] On Jul 10, 2024 this sequence was replaced by
            NM_001033135.4.
            
            On Mar 11, 2009 this sequence version replaced NM_001033135.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK155360.1, SRR1660819.219398.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-382               BY743657.1         1-382
            383-831             BF018252.1         132-580
            832-1319            CR759684.1         210-697
            1320-2427           AK005523.1         168-1275
            2428-2440           BE627920.1         1-13                c
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 18.33 cM"
     gene            1..2440
                     /gene="Rnf149"
                     /gene_synonym="1600023E10Rik; Gm15832; Greul4"
                     /note="ring finger protein 149"
                     /db_xref="GeneID:67702"
                     /db_xref="MGI:MGI:2677438"
     exon            1..521
                     /gene="Rnf149"
                     /gene_synonym="1600023E10Rik; Gm15832; Greul4"
                     /inference="alignment:Splign:2.1.0"
     exon            522..772
                     /gene="Rnf149"
                     /gene_synonym="1600023E10Rik; Gm15832; Greul4"
                     /inference="alignment:Splign:2.1.0"
     exon            773..841
                     /gene="Rnf149"
                     /gene_synonym="1600023E10Rik; Gm15832; Greul4"
                     /inference="alignment:Splign:2.1.0"
     exon            842..924
                     /gene="Rnf149"
                     /gene_synonym="1600023E10Rik; Gm15832; Greul4"
                     /inference="alignment:Splign:2.1.0"
     exon            925..1021
                     /gene="Rnf149"
                     /gene_synonym="1600023E10Rik; Gm15832; Greul4"
                     /inference="alignment:Splign:2.1.0"
     exon            1022..1214
                     /gene="Rnf149"
                     /gene_synonym="1600023E10Rik; Gm15832; Greul4"
                     /inference="alignment:Splign:2.1.0"
     exon            1215..2434
                     /gene="Rnf149"
                     /gene_synonym="1600023E10Rik; Gm15832; Greul4"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2413..2418
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rnf149"
                     /gene_synonym="1600023E10Rik; Gm15832; Greul4"
                     /note="hexamer: AATAAA"
     polyA_site      2434
                     /gene="Rnf149"
                     /gene_synonym="1600023E10Rik; Gm15832; Greul4"
                     /note="major polyA site"
ORIGIN      
        1 tgtgggccag cctggagtga gtcgcctcgt tctgactcgc gctcttcttc ctcagtagcc
       61 cggccgggcg gccatggcgg cgcggcggcg gcccgcggcc ggcgtgggag cccgggacgc
      121 actcgcggtg ctggcgctgg ccttgtgtac tcccggggtg ggcggcgggg cgctcgagtg
      181 gtactcggcc atggtgagca tcgaatacgt ggacccgcag tcgaacctga cggtgtggag
      241 cgtgtcggag agcggccgct tcggagaaag ctcgctccgg gaggagaggc agggcctggt
      301 gggcgtcccg cgcgcgcccg cgcccgcgga gggctgcgcg cccgacacgc gcttcgtggc
      361 gcccggcgcc ctcggcaacg cgccctgggt ggcgctggtg gcgcgaggcg gctgcacctt
      421 caaggacaag gtgctggcgg cggcgcggag gaacgcctcg gccgtggtgg tctacaacct
      481 ggagagcaac gggaacgcca ccgagcccat gtctcacgcg ggaacaggaa acatagtcgt
      541 cattatgatt agctacccaa aaggacggga aatttttgat ctggtgcaaa aaggaattcc
      601 agtaaaaatg cggatagaga ttggtactcg tcatatgcag gagttcatca gcggtcagtc
      661 tgtggtgttt gtggccatcg ccttcatcac catgatgatc atctcattag catggctgat
      721 attctattat atacagcgct tcctgtatac tggctcacag tttggaagtc agaatcatag
      781 gaaggagact aagaaggtta ttggccagct ccctctacac actgtgaagc atggcgagaa
      841 gggaattgat gtcgatgctg agaattgtgc agtgtgtatt gaaaacttta aagtcaaaga
      901 tgttatcaga atcctgccat gcaagcatat ttttcataga atatgcattg acccatggct
      961 tttggatcac cgaacgtgtc caatgtgtaa acttgatgtc atcaaagccc tgggatattg
     1021 gggggaccct gaggatacgc aggagctacc caccccagaa gctgccccag gaagggtttc
     1081 tgttgggaat ctgagtgtga catcccaaga tgaggagagg agtgaaagca accttccatc
     1141 atcttcctcg agcgagtctg ggccacaccg cccctgtctt aaagaagatg caggggagga
     1201 cacagcatta ctaggagccg gcaggagtga gcctcagcat ggaggatcca tatgctagca
     1261 ccatcctcac tgacagcctc accgacagag ccttggcttg aacaggacat tcagtttttt
     1321 actctagggc agagtttgta tacttgaaaa cagtggactt tattttactt tacctttcag
     1381 attcaggttt gatatacaaa gggctgagat attttattcc taaaagactt ttaattagcc
     1441 ttcatctatt tatctactaa attatgatgt ctatcataag ttttgttgta tcacctgtca
     1501 cagatgtatg tggaggggtt gtttctgagt actagactag cctctgtggt ataaaacaag
     1561 agtctgtctc ttgggctttt tagacagagc tcaccgagtt gaagtgtgaa gtgtagttcc
     1621 ttattgatca catgaacgtc tcctgagcgg agactgtaga acttggaaat gagaaatctt
     1681 gccgtgggca gtggtgcaaa ctgtggctga ggcccgagga gcttgagttc aagcctgctt
     1741 cgggctgtgt agccagactg ctacaaaggg gttaagagag agagagagag agagagagca
     1801 agagagagag agggagagca cgcgcgagag cgagagcgag cattcagctg gcttgagctg
     1861 tgtagtctgc agagacttca gaaccacaca ttccttctta tgtggaattg tgaaaagaac
     1921 actagatgat tttatgattt acatttctac ttttattgcc taatttcttt tcacacttgg
     1981 aaggagaagg gaatttatcc atgtttttct acaaactaaa aaaaaaaaaa aaaaaaacct
     2041 ggcaaaaaat gccatattgc atgttaaaaa aagcattaaa atatggattc attaagaaaa
     2101 tcaagtaggc atacagtaat gtctttaaat gattagtata ttttggtgga tttgatcttt
     2161 acaattaaaa atacttaatt aaaagtttga ttctgttgtt gttagactaa aataacattt
     2221 tcctaaagag attttaagcc gattcaatac tgtgaccttt tatccttctt ttctgtttaa
     2281 tgttctcgct ggtgaaagtc tttgaagact gttgtctaaa ttctgtatag tgcttagata
     2341 catactttga agagcaagga gtccattgtt gttgattcta aacttgtgtt gtatgtctac
     2401 tttgtagaca aaaataaatg cttattgaca aaaaaaaaaa
//
