LOCUS       NM_028842               1210 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus ring finger protein 138, retrogene 1 (Rnf138rt1),
            mRNA.
ACCESSION   NM_028842 NR_003640 XR_035170 XR_035172
VERSION     NM_028842.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1210)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1210)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY238719.1, AK006700.1 and AI853461.1.
            
            On or before Apr 13, 2013 this sequence version replaced
            NR_003640.1, NM_028842.2.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3                 BY238719.1         1-3
            4-1193              AK006700.1         3-1192
            1194-1210           AI853461.1         1-17                c
FEATURES             Location/Qualifiers
     source          1..1210
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 75.84 cM"
     gene            1..1210
                     /gene="Rnf138rt1"
                     /note="ring finger protein 138, retrogene 1"
                     /db_xref="GeneID:74264"
                     /db_xref="MGI:MGI:1921514"
     exon            1..1194
                     /gene="Rnf138rt1"
                     /inference="alignment:Splign:2.1.0"
     CDS             350..1096
                     /gene="Rnf138rt1"
                     /note="ring finger protein 138 pseudogene"
                     /codon_start=1
                     /product="E3 ubiquitin-protein ligase RNF138-like"
                     /protein_id="NP_083118.1"
                     /db_xref="CCDS:CCDS72464.1"
                     /db_xref="GeneID:74264"
                     /db_xref="MGI:MGI:1921514"
                     /translation="MAEEESASTTSYTEDDFYCPICQEVFKTPVRVAACKHVFCRKCF
                     LSAMKESRLHCPLCRGNVTRRERACPVRAVDLETIMRHFPGNCRCCSQRVELYRMRQH
                     YKTCEKYQDEFGVSTSVSSFQQSPNSVGNSNNEAPASANAEVLQEEEENASPPDEPTF
                     DCPLCEEVTMSRQRLLDHCNSSHRGRVVSVTCPICLSLPWGDPPQLTRNFVSHLNQRH
                     QFDYGDFVNLQLDEETQFQIAIEESFHVNI"
ORIGIN      
        1 tctgcagtga ccaaccagcc tggcaggcag cagttacctc tcaactgatg gctgaatagg
       61 aggtatctcc atcaccatga gcttcgggtc tggcgggttc tgaggctcat aagaacagag
      121 catcacccgt cattcgctgg agatccagtg gtctgaagct cactcaactg ctggacagaa
      181 aggcgctgaa atcggactgc agcaggggac cacctgtctg cggatctgcc gcggagagag
      241 cttgacccaa agcgctgctt ggagaggatc cggaggggag ctctgagccg ccaccgccac
      301 cttggcagcc gcgagccgcc atcgccttgg gcttctaccg gtcgccacta tggccgagga
      361 agaatctgcc tccaccacgt cttatactga agatgatttc tactgtccga tatgccaaga
      421 agtcttcaaa acgccagttc gggtcgcggc ctgtaagcat gttttctgca gaaaatgttt
      481 cctgagtgca atgaaggaga gccggctcca ctgccccctg tgccgtggaa atgtgactag
      541 aagagaaaga gcttgtccag tgagggctgt agacctcgaa accatcatga gacattttcc
      601 tggtaattgc cgatgctgtt cccagcgcgt tgaactctat cgtatgaggc agcactacaa
      661 aacttgcgaa aagtaccagg atgaatttgg agtttctaca tctgtttcaa gcttccaaca
      721 gtctccaaac tccgtgggca acagtaacaa cgaggcaccg gcctcagcga atgctgaggt
      781 tttacaagaa gaggaagaga acgcaagccc acctgatgag cccaccttcg attgtcctct
      841 gtgtgaagaa gtaaccatga gcaggcaacg tttgctggat cattgcaaca gcagccaccg
      901 aggtcgtgtc gtttcagtca cttgcccaat ttgcctatct cttccatggg gcgacccgcc
      961 tcaactcacc agaaattttg ttagtcacct taatcagagg catcagtttg attacggaga
     1021 tttcgtgaat cttcagctgg atgaggaaac ccaatttcag atcgccattg aagagtcctt
     1081 ccacgtcaac atctagaggg actgtactca tttctacaat tgttcctaag ggacaattta
     1141 cattaaaaca tcccttcaat aacttgatgt tttaaataaa agtgatcagt ctgaaaaaaa
     1201 aaaaaaaaaa
//
