LOCUS       NM_025660               1510 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus RIB43A domain with coiled-coils 1 (Ribc1), mRNA.
ACCESSION   NM_025660
VERSION     NM_025660.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1510)
  AUTHORS   Zhou,L., Liu,H., Liu,S., Yang,X., Dong,Y., Pan,Y., Xiao,Z.,
            Zheng,B., Sun,Y., Huang,P., Zhang,X., Hu,J., Sun,R., Feng,S.,
            Zhu,Y., Liu,M., Gui,M. and Wu,J.
  TITLE     Structures of sperm flagellar doublet microtubules expand the
            genetic spectrum of male infertility
  JOURNAL   Cell 186 (13), 2897-2910 (2023)
   PUBMED   37295417
REFERENCE   2  (bases 1 to 1510)
  AUTHORS   Tsuchiya,K.D. and Willard,H.F.
  TITLE     Chromosomal domains and escape from X inactivation: comparative X
            inactivation analysis in mouse and human
  JOURNAL   Mamm Genome 11 (10), 849-854 (2000)
   PUBMED   11003698
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL672180.11 and AK011592.1.
            
            On Sep 29, 2017 this sequence version replaced NM_025660.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK011592.1, BC050755.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164137 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-127               AL672180.11        106040-106166       c
            128-1506            AK011592.1         134-1512
            1507-1510           AL672180.11        94451-94454         c
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 68.46 cM"
     gene            1..1510
                     /gene="Ribc1"
                     /gene_synonym="2610028I09Rik"
                     /note="RIB43A domain with coiled-coils 1"
                     /db_xref="GeneID:66611"
                     /db_xref="MGI:MGI:1913861"
     exon            1..133
                     /gene="Ribc1"
                     /gene_synonym="2610028I09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            134..221
                     /gene="Ribc1"
                     /gene_synonym="2610028I09Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             222..1361
                     /gene="Ribc1"
                     /gene_synonym="2610028I09Rik"
                     /codon_start=1
                     /product="RIB43A-like with coiled-coils protein 1"
                     /protein_id="NP_079936.1"
                     /db_xref="CCDS:CCDS30472.1"
                     /db_xref="GeneID:66611"
                     /db_xref="MGI:MGI:1913861"
                     /translation="MYKLDLVSDPRELAAIEARRNREKERQSRFFNVRNRVMGVDVEA
                     LNYQVEERKFREAIERNKDIAYGTKHAHYDLVAQMLEKEEAERAYRLSKRVQDFREQR
                     QQQYKNGHEFDFWDPDQFQEFRVPYYEKDAYFGPASMQYFFGEDLERASHVRMQQEQM
                     RYNLEKQLQEQQAAREEEARAALLSDQLRLAADTRAAELARLEESCRAAMRTAMANAN
                     KAQAAKQALQQRREQQRQQEANLTEVKKQVTSDLLTENPQVAQRANAPHRVLPYCWKG
                     MSAEQRAAIRKTQETQRQEKKEQRQAEKLVEAEWGRQNKRLAEAALELEEQERELCAE
                     FRRGLGSFNRELAKEQQAQQNYLNSVIYTNQPTAHYYLQFNTSSR"
     exon            222..338
                     /gene="Ribc1"
                     /gene_synonym="2610028I09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            339..420
                     /gene="Ribc1"
                     /gene_synonym="2610028I09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            421..765
                     /gene="Ribc1"
                     /gene_synonym="2610028I09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            766..884
                     /gene="Ribc1"
                     /gene_synonym="2610028I09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            885..1279
                     /gene="Ribc1"
                     /gene_synonym="2610028I09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1280..1510
                     /gene="Ribc1"
                     /gene_synonym="2610028I09Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1487..1492
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ribc1"
                     /gene_synonym="2610028I09Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1510
                     /gene="Ribc1"
                     /gene_synonym="2610028I09Rik"
                     /note="major polyA site"
ORIGIN      
        1 gtagttaccc agcaactgtt gaagtggccg ccaactagga cgggaagcgt tagtgctctg
       61 atcacttcgg gggaaatcag agcaagcagg cggggtctga gcccacgctt gctgggaaag
      121 aagtcacttc aagaatttaa agactgccgt tgtaaatcca agagtcaact tgggtccaat
      181 ccattttcga gcttcaaaac tggaattctg tactgagaaa gatgtataaa ttagaccttg
      241 tatcagatcc cagggagctg gcagccattg aagctagaag aaatcgtgaa aaggaacgcc
      301 aaagccgatt cttcaatgtg cggaaccgag tcatgggggt ggatgtggaa gccctcaact
      361 accaggtgga ggaacgaaag tttcgggagg caatagagcg aaacaaagat atcgcttatg
      421 gtaccaagca tgcgcactat gatctggtag cccagatgct agagaaagaa gaggcagaac
      481 gagcataccg gctgtccaag agagtacagg attttcggga acaaaggcag cagcaataca
      541 agaatggaca tgaatttgac ttctgggatc cagaccaatt ccaggagttt cgggtccctt
      601 attatgagaa ggatgcatac tttggcccag ccagcatgca gtacttcttt ggagaggacc
      661 tggaaagggc ctcacacgtg agaatgcagc aggaacagat gagatacaac ctggaaaaac
      721 agctacagga gcaacaggca gccagagaag aggaggcccg agcagctttg ctcagtgacc
      781 aactgcgcct agctgctgac acgcgggctg ctgaactggc taggctggag gaatcctgtc
      841 gagcagctat gaggactgct atggccaatg ccaacaaagc ccaggcagcc aagcaagccc
      901 tgcagcagcg ccgtgaacag cagcggcaac aggaggccaa cctcacagag gtcaagaaac
      961 aagtcaccag tgacctgctg actgagaatc ctcaagttgc ccaaagagcc aatgctcctc
     1021 accgggtcct gccctattgt tggaagggga tgagtgcaga gcagagagct gccatcagaa
     1081 aaactcaaga aacacaacga caagaaaaaa aggaacagcg ccaagccgaa aagttagtgg
     1141 aagctgagtg gggaaggcaa aacaaacggc tggctgaagc ggccctggaa ctggaagaac
     1201 aggagcggga actgtgtgca gagttccgaa ggggactggg ctccttcaac agggagctag
     1261 ctaaggagca gcaagctcag caaaattatc tgaattcggt catctacacc aatcaaccga
     1321 ctgcgcacta ttacctacag ttcaacacca gcagccgctg agctcaggat ggtcaccttc
     1381 cttctcacag gtggccagga gtcaaaaaaa atgcaacaaa tcctcatttc taatttctac
     1441 ccagtaggag ggaactaaag ccaaacctcc actgtctact ctaggtaata aagtcgttcg
     1501 ctacattcaa
//
