LOCUS       NM_001039696             929 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus reproductive homeobox 4F (Rhox4f), mRNA.
ACCESSION   NM_001039696 XM_911486
VERSION     NM_001039696.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 929)
  AUTHORS   MacLean,J.A. 2nd, Lorenzetti,D., Hu,Z., Salerno,W.J., Miller,J. and
            Wilkinson,M.F.
  TITLE     Rhox homeobox gene cluster: recent duplication of three family
            members
  JOURNAL   Genesis 44 (3), 122-129 (2006)
   PUBMED   16496311
REFERENCE   2  (bases 1 to 929)
  AUTHORS   Morris L, Gordon J and Blackburn CC.
  TITLE     Identification of a tandem duplicated array in the Rhox alpha locus
            on mouse chromosome X
  JOURNAL   Mamm Genome 17 (2), 178-187 (2006)
   PUBMED   16465597
REFERENCE   3  (bases 1 to 929)
  AUTHORS   Maclean JA 2nd, Chen MA, Wayne CM, Bruce SR, Rao M, Meistrich ML,
            Macleod C and Wilkinson MF.
  TITLE     Rhox: a new homeobox gene cluster
  JOURNAL   Cell 120 (3), 369-382 (2005)
   PUBMED   15707895
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AJ972670.1.
            
            On Mar 8, 2006 this sequence version replaced XM_911486.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ972670.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..929
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 21.91 cM"
     gene            1..929
                     /gene="Rhox4f"
                     /gene_synonym="Rhox4.6; Rhox4e; Rhox4h"
                     /note="reproductive homeobox 4F"
                     /db_xref="GeneID:636177"
                     /db_xref="MGI:MGI:3613392"
     exon            1..241
                     /gene="Rhox4f"
                     /gene_synonym="Rhox4.6; Rhox4e; Rhox4h"
                     /inference="alignment:Splign:2.1.0"
     CDS             175..792
                     /gene="Rhox4f"
                     /gene_synonym="Rhox4.6; Rhox4e; Rhox4h"
                     /note="reproductive homeobox 4H"
                     /codon_start=1
                     /product="reproductive homeobox 4F"
                     /protein_id="NP_001034785.1"
                     /db_xref="CCDS:CCDS40938.1"
                     /db_xref="GeneID:636177"
                     /db_xref="MGI:MGI:3613392"
                     /translation="MEHQNTNYLLHEGLVKDKEKLNGRKTQTVLPLDGEGRNEGESGL
                     GQSGATAVEGDKAEELSGEGGPAAGDADLMDNSNQEDQDTSGSAQEEEKLPEEPVLKD
                     AVVIDKVQPIPVLVSGVRPKSVWVQQRSLHYNFQWWQLQELERIFQQNHFIRAEERRH
                     LARWIGVSEARVMTWFKKRREHFRRGQSQLGMNDDAPVGSHSTFL"
     exon            242..647
                     /gene="Rhox4f"
                     /gene_synonym="Rhox4.6; Rhox4e; Rhox4h"
                     /inference="alignment:Splign:2.1.0"
     exon            648..693
                     /gene="Rhox4f"
                     /gene_synonym="Rhox4.6; Rhox4e; Rhox4h"
                     /inference="alignment:Splign:2.1.0"
     exon            694..929
                     /gene="Rhox4f"
                     /gene_synonym="Rhox4.6; Rhox4e; Rhox4h"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggttttcgg ctttcagctt tcggctttcg gctttcggct ttcggctttc ggctttcggc
       61 tttcggcttt cggctttcgg ctttaggctt ttggctttcg cctttaggtt ttctaaacct
      121 caggatgtcc gactcagatt ctgctgggga aagctgcagg gaagcactca ggacatggag
      181 catcaaaaca ccaactacct acttcatgag ggacttgtca aggacaagga aaagttgaat
      241 ggtaggaaga cacagacagt cttaccactg gatggagagg gaagaaatga gggagagagt
      301 ggactgggcc agtccggagc cacagcagtg gaaggggaca aagcagaaga attaagtgga
      361 gaaggtgggc ctgctgctgg tgatgcagac ctcatggata acagcaacca agaggaccag
      421 gacaccagtg gcagtgccca ggaggaggag aagctgccag aggagccagt tctcaaggat
      481 gctgtggtca tagacaaagt gcagcctatt ccagtgctgg tatctggtgt gcggcctaag
      541 tcagtgtggg tacagcagcg tagcttacac tacaatttcc aatggtggca gctgcaggag
      601 ctggagcgca ttttccagca gaatcacttc atccgtgcag aggaaagaag acatctggca
      661 agatggatag gtgtgagtga agccagagtt atgacatggt ttaagaagag gagagagcac
      721 ttcagaagag gacaaagtca gttaggaatg aatgatgatg cccctgtggg gtcccactct
      781 acctttctct gaagatggca caggaggcct ggtgtaccac ccttgaccag gagccacgtg
      841 cagacccctg ctgccttcca ccagcatgtt attgcatctc tatcccctaa gcatttgtat
      901 gtgaaataaa tagattctca gtttctttg
//
