LOCUS       NM_001039695             759 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus reproductive homeobox 4D (Rhox4d), mRNA.
ACCESSION   NM_001039695
VERSION     NM_001039695.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 759)
  AUTHORS   MacLean,J.A. 2nd, Lorenzetti,D., Hu,Z., Salerno,W.J., Miller,J. and
            Wilkinson,M.F.
  TITLE     Rhox homeobox gene cluster: recent duplication of three family
            members
  JOURNAL   Genesis 44 (3), 122-129 (2006)
   PUBMED   16496311
REFERENCE   2  (bases 1 to 759)
  AUTHORS   Morris L, Gordon J and Blackburn CC.
  TITLE     Identification of a tandem duplicated array in the Rhox alpha locus
            on mouse chromosome X
  JOURNAL   Mamm Genome 17 (2), 178-187 (2006)
   PUBMED   16465597
REFERENCE   3  (bases 1 to 759)
  AUTHORS   Maclean JA 2nd, Chen MA, Wayne CM, Bruce SR, Rao M, Meistrich ML,
            Macleod C and Wilkinson MF.
  TITLE     Rhox: a new homeobox gene cluster
  JOURNAL   Cell 120 (3), 369-382 (2005)
   PUBMED   15707895
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AJ972668.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ972668.1, BC147696.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 21.82 cM"
     gene            1..759
                     /gene="Rhox4d"
                     /gene_synonym="Rhox4.4; Rhox4c"
                     /note="reproductive homeobox 4D"
                     /db_xref="GeneID:664610"
                     /db_xref="MGI:MGI:3613388"
     exon            1..71
                     /gene="Rhox4d"
                     /gene_synonym="Rhox4.4; Rhox4c"
                     /inference="alignment:Splign:2.1.0"
     CDS             5..622
                     /gene="Rhox4d"
                     /gene_synonym="Rhox4.4; Rhox4c"
                     /codon_start=1
                     /product="reproductive homeobox 4D"
                     /protein_id="NP_001034784.1"
                     /db_xref="CCDS:CCDS40935.1"
                     /db_xref="GeneID:664610"
                     /db_xref="MGI:MGI:3613388"
                     /translation="MEHQNTNYLLHEGLGKDKENLNGGKTQTVLPLDGEGRNEGESVL
                     GQSGAAAVEWDKAEELSGEGGPAAGDADLMDNSNQEDQDTSGSAQEEEKLPEEPVLRD
                     AVVIDKVQPIPVLVSGVRPKSVWVQQRSLHYNFQWWQLQELERIFQQNHFIRAEERRH
                     LARWIGVSEARVMRWFKKRREHFRRGQSQLGMNDDAPVGSHSTFL"
     exon            72..477
                     /gene="Rhox4d"
                     /gene_synonym="Rhox4.4; Rhox4c"
                     /inference="alignment:Splign:2.1.0"
     exon            478..523
                     /gene="Rhox4d"
                     /gene_synonym="Rhox4.4; Rhox4c"
                     /inference="alignment:Splign:2.1.0"
     exon            524..759
                     /gene="Rhox4d"
                     /gene_synonym="Rhox4.4; Rhox4c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggacatggag catcaaaaca ccaactacct acttcatgag ggacttggca aggacaagga
       61 aaatttgaat ggtgggaaga cacagacagt cttaccactg gatggagagg gaagaaatga
      121 gggagagagt gtactgggcc agtccggagc cgcagcagtg gaatgggaca aagcagaaga
      181 attaagtgga gaaggtgggc ctgctgctgg tgatgcagac ctcatggata acagcaacca
      241 agaggaccag gacaccagtg gcagtgccca ggaggaggag aagctgccag aggagccagt
      301 tctcagggat gctgtggtca tagacaaagt gcagcctatt ccagtgctgg tatctggtgt
      361 gcggcctaag tcagtgtggg tacagcagcg tagcttacac tacaatttcc aatggtggca
      421 gctgcaggag ctggagcgca ttttccagca gaatcacttc atccgtgcag aggaaagaag
      481 acatctggca agatggatag gtgtgagtga agccagagtt atgagatggt ttaagaagag
      541 gagagagcac ttcagaagag gacaaagtca gttaggaatg aatgatgatg cccctgtggg
      601 gtcccactct acctttctct gaagatggca caggaggcct ggtgtaccac ccttgaccag
      661 gagccacatg cagacacctg cggccttcca ccagcatgtt attgcatctc tattccctaa
      721 gcatttgtat gtgaaataaa tagattctca gtttctttg
//
