LOCUS       NM_001039689             903 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus reproductive homeobox 4C (Rhox4c), mRNA.
ACCESSION   NM_001039689 XM_486652 XM_911553
VERSION     NM_001039689.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 903)
  AUTHORS   MacLean,J.A. 2nd, Lorenzetti,D., Hu,Z., Salerno,W.J., Miller,J. and
            Wilkinson,M.F.
  TITLE     Rhox homeobox gene cluster: recent duplication of three family
            members
  JOURNAL   Genesis 44 (3), 122-129 (2006)
   PUBMED   16496311
REFERENCE   2  (bases 1 to 903)
  AUTHORS   Morris L, Gordon J and Blackburn CC.
  TITLE     Identification of a tandem duplicated array in the Rhox alpha locus
            on mouse chromosome X
  JOURNAL   Mamm Genome 17 (2), 178-187 (2006)
   PUBMED   16465597
REFERENCE   3  (bases 1 to 903)
  AUTHORS   Maclean JA 2nd, Chen MA, Wayne CM, Bruce SR, Rao M, Meistrich ML,
            Macleod C and Wilkinson MF.
  TITLE     Rhox: a new homeobox gene cluster
  JOURNAL   Cell 120 (3), 369-382 (2005)
   PUBMED   15707895
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AJ972667.1.
            
            On or before Mar 8, 2006 this sequence version replaced
            XM_911553.1, XM_486652.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ972667.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134, SAMN01164142
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 21.78 cM"
     gene            1..903
                     /gene="Rhox4c"
                     /gene_synonym="Rhox4.3; Rhox4b"
                     /note="reproductive homeobox 4C"
                     /db_xref="GeneID:434759"
                     /db_xref="MGI:MGI:3613386"
     exon            1..215
                     /gene="Rhox4c"
                     /gene_synonym="Rhox4.3; Rhox4b"
                     /inference="alignment:Splign:2.1.0"
     CDS             149..766
                     /gene="Rhox4c"
                     /gene_synonym="Rhox4.3; Rhox4b"
                     /codon_start=1
                     /product="reproductive homeobox 4C"
                     /protein_id="NP_001034778.1"
                     /db_xref="CCDS:CCDS40933.1"
                     /db_xref="GeneID:434759"
                     /db_xref="MGI:MGI:3613386"
                     /translation="MEHQNTNYLLHEGLGKDKEKLNGGKTQAVLPLDGEGRNEGESVL
                     GQSGAAAVEGDKAEELSGEGGPAAGDADLMDNSNQEDQDTSGSAQEEEKLPEEPVLKD
                     AVVIDKVQPIPVLVSGVRPKSVWVQQRSLHYNFQWWQLQELERIFQQNHFIRAEERRH
                     LARWIGVSETRVKRWFKKRREHFRRGQSQLGMNDDAPVGSHSTFL"
     exon            216..621
                     /gene="Rhox4c"
                     /gene_synonym="Rhox4.3; Rhox4b"
                     /inference="alignment:Splign:2.1.0"
     exon            622..667
                     /gene="Rhox4c"
                     /gene_synonym="Rhox4.3; Rhox4b"
                     /inference="alignment:Splign:2.1.0"
     exon            668..903
                     /gene="Rhox4c"
                     /gene_synonym="Rhox4.3; Rhox4b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gttagctttc agctttcggc tttcggcttt cggctttcgg ctttcggctt tcggcttttg
       61 cctttcggct tttgcctttc agctttcaaa acctcaggag ctccgactca gaatctgctg
      121 gggaaagctg cagggaagcc ctcaggacat ggagcatcaa aacaccaact acctacttca
      181 tgagggactt ggcaaggaca aggaaaagtt gaatggtggg aagacacagg cagtcttacc
      241 actggatgga gagggaagaa atgagggaga gagtgtactg ggccagtccg gagccgcagc
      301 agtggaaggg gacaaagcag aagaattaag tggagaaggt gggcctgctg ctggtgatgc
      361 agacctcatg gataacagca accaagagga ccaggacacc agtggcagtg cccaggagga
      421 ggagaagctg ccagaggagc cagttctcaa ggatgctgtg gtcatagaca aagtgcagcc
      481 tattccagtg ctggtatctg gtgtgcggcc taagtcagtg tgggtacagc agcgtagctt
      541 acactacaat ttccaatggt ggcagctgca ggagctggag cgcattttcc agcagaatca
      601 cttcatccgt gcagaggaaa gaagacatct ggcaagatgg ataggtgtga gtgaaaccag
      661 agttaagaga tggtttaaga agaggagaga gcacttcaga agaggacaaa gtcagttagg
      721 aatgaatgac gatgcccctg tggggtccca ctctaccttt ctctgaagat ggcacaggag
      781 gcctggtgta ccacccttga ccaggagcca cgtgcagaca cctgctgtct tccaccagca
      841 tgttattgca actctattcc ctaagcattt gtatgtgaaa taaatagatt ctcagtttct
      901 ttg
//
