LOCUS       XM_003688970             833 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus reproductive homeobox 3A2 (Rhox3a2), mRNA.
ACCESSION   XM_003688970
VERSION     XM_003688970.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000086.8) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_003688970.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="X"
     gene            1..833
                     /gene="Rhox3a2"
                     /note="reproductive homeobox 3A2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     8 Proteins, and 93% coverage of the annotated genomic
                     feature by RNAseq alignments, including 4 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:100861623"
                     /db_xref="MGI:MGI:5434440"
     CDS             6..653
                     /gene="Rhox3a2"
                     /codon_start=1
                     /product="rhox homeobox family member 1-like"
                     /protein_id="XP_003689018.1"
                     /db_xref="GeneID:100861623"
                     /db_xref="MGI:MGI:5434440"
                     /translation="MSMKPERSISNWIHSNVERAGRNLFQVNGHRSALLPELPQDYHR
                     ASRSVNGCETKMDSTQGTKVLPAEEGKNEEDGGQVESALGATAARGRGKEALNGESPA
                     AAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHR
                     FTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL"
ORIGIN      
        1 aggtgatgag catgaagcca gaacgttcca tctctaactg gatacatagt aatgtggaac
       61 gggctggaag aaatctcttc caggtcaacg gtcaccgctc tgctctatta ccggaactac
      121 ctcaggatta ccacagagct tcaaggtcag tcaacggatg tgagactaaa atggacagca
      181 cccaaggtac caaggttttg ccggctgaag agggaaaaaa tgaagaagat ggaggacagg
      241 tggagtcggc attgggagcc acagccgcaa ggggtagagg aaaagaagca ttaaatggag
      301 agagtcccgc cgctgctggc actgcaggcc ttgtagagga agacaggaac aaggaagatg
      361 gtggcaccaa gggaggtgag aagaatgagc aggaagtgag ggagcagatt cctgagcatg
      421 ttgaaggaga gagtgaccag gctgaagcgc caaggcaggt gccacgacgt cgattgcacc
      481 atagattcac ccagtggcag ctggacgaac tggagagaat tttccggatg aattattttc
      541 tcagtctaga agcaagaaaa caactggccc gatggatggg tgtgaatgaa gccatagtga
      601 agagatggtt tcagaagagg agagaacaat acaggtggta taagaggcta taaggtctca
      661 gaagttctcc tcctgcttct cagaacatct ttcctgaaga ctgtggagga accctgcagt
      721 gccactatcg ccaaggcaac atagagagag gaattgcttt cgtctcctaa cgatatgtta
      781 ttaaactctt atatctgaag cgattatatt tcaataacaa tatgaatttt caa
//
