LOCUS       NM_001099316             761 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus reproductive homeobox 2B (Rhox2b), mRNA.
ACCESSION   NM_001099316 XM_001474057 XM_001474076
VERSION     NM_001099316.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 761)
  AUTHORS   MacLean,J.A. 2nd, Lorenzetti,D., Hu,Z., Salerno,W.J., Miller,J. and
            Wilkinson,M.F.
  TITLE     Rhox homeobox gene cluster: recent duplication of three family
            members
  JOURNAL   Genesis 44 (3), 122-129 (2006)
   PUBMED   16496311
REFERENCE   2  (bases 1 to 761)
  AUTHORS   Morris L, Gordon J and Blackburn CC.
  TITLE     Identification of a tandem duplicated array in the Rhox alpha locus
            on mouse chromosome X
  JOURNAL   Mamm Genome 17 (2), 178-187 (2006)
   PUBMED   16465597
REFERENCE   3  (bases 1 to 761)
  AUTHORS   Maclean JA 2nd, Chen MA, Wayne CM, Bruce SR, Rao M, Meistrich ML,
            Macleod C and Wilkinson MF.
  TITLE     Rhox: a new homeobox gene cluster
  JOURNAL   Cell 120 (3), 369-382 (2005)
   PUBMED   15707895
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC049546.1.
            
            On or before Jul 25, 2007 this sequence version replaced
            XM_001474057.1, XM_001474076.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC049546.1, CA464891.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164142 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-761               BC049546.1         1-761
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 21.71 cM"
     gene            1..761
                     /gene="Rhox2b"
                     /gene_synonym="Rhox2.2; Rhox2a"
                     /note="reproductive homeobox 2B"
                     /db_xref="GeneID:100039913"
                     /db_xref="MGI:MGI:3770262"
     exon            1..73
                     /gene="Rhox2b"
                     /gene_synonym="Rhox2.2; Rhox2a"
                     /inference="alignment:Splign:2.1.0"
     CDS             7..582
                     /gene="Rhox2b"
                     /gene_synonym="Rhox2.2; Rhox2a"
                     /note="reproductive homeobox 2A"
                     /codon_start=1
                     /product="reproductive homeobox 2B"
                     /protein_id="NP_001092786.1"
                     /db_xref="CCDS:CCDS53052.1"
                     /db_xref="GeneID:100039913"
                     /db_xref="MGI:MGI:3770262"
                     /translation="MERQSVNYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGPG
                     LPGSGASAAEGYRAGEISAGGPAAPVADLMDNSNQEDLGATGCDQEKEKQPEEPVPDS
                     MGDLENVKHVSGPWSTVNPVRVLVPKFRHGWQQSFNVLQLQELESIFQCNHYISTKEA
                     NRLARSMGVSEATVQEWFLKRREKYRSYKRL"
     exon            74..485
                     /gene="Rhox2b"
                     /gene_synonym="Rhox2.2; Rhox2a"
                     /inference="alignment:Splign:2.1.0"
     exon            486..531
                     /gene="Rhox2b"
                     /gene_synonym="Rhox2.2; Rhox2a"
                     /inference="alignment:Splign:2.1.0"
     exon            532..761
                     /gene="Rhox2b"
                     /gene_synonym="Rhox2.2; Rhox2a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acagacatgg agcgacaaag cgtcaattac aagcttgatg tgggacctga ggaggatgag
       61 gaaaatgcga atggtataaa gactctgatg gtcttgctgg ctggagaggg aagaaatgag
      121 ggagagagtg gaccgggcct gcctgggtcg ggagcctcag cagcggaagg atacagagca
      181 ggagaaataa gtgcaggtgg gcctgctgcg ccagtagccg acctcatgga taacagcaac
      241 caagaggacc ttggtgccac tggctgtgac caggagaagg agaagcagcc agaggagcca
      301 gtccctgatt ccatgggaga tttggaaaat gtaaagcatg tgtccgggcc gtggtccact
      361 gttaatcctg tgagagtgtt ggtgcccaaa ttccgccacg gttggcaaca gagcttcaat
      421 gtgctgcaac tacaagagct ggagagcatc ttccagtgca atcactacat cagcactaag
      481 gaggcaaatc gcctggcaag atccatggga gtgagtgaag ccacagtgca ggaatggttt
      541 ttgaagagga gagaaaaata caggagttat aagaggctgt aaatgctcag aggtcctctt
      601 cctgcttccc acagcatctc tctgtgaagg ctatggagaa gccccaggga tccacgcttc
      661 ctcaaggcgc catagccaga cgatgttttc ccgccaaagt cctgttacaa cacagttatc
      721 tcctcaatac ttgtattagc aataaagagc tgaattctcc a
//
