LOCUS       XM_036158195            4676 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus Rho-related BTB domain containing 3
            (Rhobtb3), transcript variant X5, mRNA.
ACCESSION   XM_036158195
VERSION     XM_036158195.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000079.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4676
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="13"
     gene            1..4676
                     /gene="Rhobtb3"
                     /gene_synonym="1700040C17Rik; 2610033K01Rik;
                     4930503C18Rik; mKIAA0878"
                     /note="Rho-related BTB domain containing 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 mRNAs, 11 ESTs, 188 long SRA reads, and 99% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 27 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:73296"
                     /db_xref="MGI:MGI:1920546"
     CDS             614..1867
                     /gene="Rhobtb3"
                     /gene_synonym="1700040C17Rik; 2610033K01Rik;
                     4930503C18Rik; mKIAA0878"
                     /codon_start=1
                     /product="rho-related BTB domain-containing protein 3
                     isoform X5"
                     /protein_id="XP_036014088.1"
                     /db_xref="GeneID:73296"
                     /db_xref="MGI:MGI:1920546"
                     /translation="MIQALNQKTSEKMKKRKMTSSFHGIRPPQLEQPEKMPVLKAEAS
                     HYHSDLNNLLLCCQCVDVVFYHPEVTGVVEAHKIVLCSVSHVFMLLFNVKSPADIQDS
                     SIIRTTQDLFAINRDAVLPGASQEAPSNPPLPVIVKDALFCSCLSDILRFIYSGAFQW
                     EELEEDVRRKLKDSGDVSDIIEKVKCILKTPGKINCLRNCKTYQARKPLWFYNTSLKF
                     FLNKPMLADVVFEIQGATVPAHRAILVARCEVMAAMFNGNYMEAKSVLIPVYGVSKET
                     FLSFLEYLYTDSCCPAGIFQAMCLLICAEMYQVSRLQHICELFIITQLQSMPSRELAS
                     MNLDIVDLLKKAKFHHSDCLSTWLLHFIATNYLIFSQKPEFQDLSVEERSFVEKHRWP
                     SNMYLKQLAEYRKYIHSRKCRCLVM"
ORIGIN      
        1 gggcggaggc gcggcggcca ggagcggcga ccagggaccg cagcgctgcc agcgcccggc
       61 cggccgctca ctcccggccc gctcctctgc gtcggtagcg ccgcgtcgta ggagcgggag
      121 ggccgcggcc ggggatgagc tgactgcagt gagagcgtcg cccgggcccc cgccaggccg
      181 cccgctgcca tctccgcgcc gccctgccag ccgcgatcat gtccatccac atcgtggcgt
      241 tggggaacga gggcgacacg ttccaccagg acaaccggcc gtcggggctc atccgcacat
      301 acctgggaag aagcccgctg gtgtcggggg acgagagtag cttgttgctg aacgcggcca
      361 gcacggtcgc gcgcccggtg ttcactgagt accaggccag tgcgttcggg aacgtcaagc
      421 tggtggtgca cgactgtccc gtctggaaga attaccttgt acatgccccc tgtgtacttc
      481 agaccgaggg agctgtgtta ccaccacaga agggatccaa cttgccaaag aactgggagc
      541 tacctatctg gaactccaca gccttgatga tttctacatt ggaaagtact ttggaggagt
      601 gctggagtat tttatgattc aagccttaaa tcagaagaca agtgaaaaaa tgaagaaaag
      661 gaaaatgacc agctccttcc atgggattcg acctcctcag cttgaacagc cagaaaagat
      721 gcctgtcttg aaagctgagg catcacacta tcactccgac ttgaataact tgctgctctg
      781 ctgccagtgt gtggatgtgg ttttttacca cccagaagtg acgggcgtcg tggaagccca
      841 caagatcgtt ctctgctctg taagccatgt tttcatgctg cttttcaatg tgaaaagccc
      901 ggccgacatt caggattcca gtatcatccg aaccacccag gatctctttg ccataaacag
      961 agatgctgtg cttccaggtg ctagccagga agcccccagc aacccaccat tgcctgttat
     1021 tgttaaggac gccctcttct gctcctgttt atcagacatt ctgcgcttca tttattcagg
     1081 tgcttttcag tgggaagagc tggaagaaga tgtcaggagg aagttgaaag attccgggga
     1141 tgtttctgat ataatcgaga aagttaaatg tattttaaaa acaccaggaa agattaattg
     1201 cctgaggaac tgcaagacct accaagccag gaagcctctg tggttttata atacgtctct
     1261 caagtttttc cttaataaac cgatgcttgc cgatgttgtc tttgaaatac aaggagcaac
     1321 tgtgccagcc cacagggcca tcttggtggc acgatgtgaa gtgatggctg ccatgtttaa
     1381 tggtaattat atggaagcca agagtgtact gattccagtt tatggcgttt ccaaagagac
     1441 attcttgtca tttttagaat acttatacac agactcttgt tgcccagctg gcatttttca
     1501 ggccatgtgt ctcctgatct gtgctgagat gtaccaggtc tctagactgc agcacatctg
     1561 tgagctgttc atcatcacac agctgcagag catgcccagc agggagctgg cctccatgaa
     1621 cctcgacatt gtagacctgc tcaaaaaggc caagtttcac cactcagact gcctttccac
     1681 ctggctgctt catttcatcg ccactaacta cctcatattc agccaaaagc ctgaatttca
     1741 agacctttca gtggaagaac gaagttttgt tgaaaagcac agatggccat caaacatgta
     1801 cttgaagcag ctggcagaat acaggaagta tatccactcc cggaaatgtc gctgtttagt
     1861 catgtgacct gagcgtttgc atacatacac ttttttttat tatgaagaat gggtacttct
     1921 ggattccagg aaaaattctt ataactaaaa tcaatatgtt ttaaaagtca ccatatagct
     1981 tcttactagt tatcttttaa agactgtggt ggtcttaaaa gggaacaaaa gctactacag
     2041 actaaattta tgtttcacct agaatataaa actgttagac attgggttct cctttacgtt
     2101 gccctattgc tttaataaca tcaagatctc tcctagttaa gaggtgttta attaaaaaaa
     2161 aaaagcatct aggataaata taaaaatttc atcatgtctg agtggttgct ctgctaaaat
     2221 aaggggcatt taaaagccaa atgtaaccat gggattcaga agagcactaa ccagtgcagc
     2281 atagaaatag gaatagcgta ggaatagaaa tttgcccaag actttgatag tcatctggtt
     2341 tcagttcagc aagggtactt gaatcaatat ggtagcccca tctggaccat ccacccacat
     2401 ctgcttgtca atctggctgc aaacctaagc aggcaggtag tctatggact tccaaactta
     2461 gaagggtctg atattaggtt tagtgctctg ctagtgcagt tgttgaattc ttaagaatgt
     2521 ttgatgaagg catattttca ctttgtactg gctcaccaaa attgctgaga tggtgttttc
     2581 ttttccgttt ggttttgggt ttttttttgg tttttttttt tggttttggt tttgttttaa
     2641 gatggggttt ctctgtgtaa cattcctagc tgtcctggaa cttgctttat agtccaggct
     2701 ggcctcacat ccacagagac atgctaggat taagggtgtg tgccactatg cctggcttaa
     2761 gtctttttct cactcaaacc ttctctctgt agaagcagaa aagttgctga tagccaggaa
     2821 agagagcttt cggccagggg agcagagtgg agactcccat ctttggggaa gcatatatgc
     2881 tcaagcgcct ctacaaagac attccctggc agtaagaaat gctgaaatgc tttttgttgg
     2941 ttttgaaaca ctcccccagt tctagctgta ccccagaaaa acaaatactt tcttgatcaa
     3001 tatgtaaagc caggaagttg gtaagagtga ctgagtagcc tgactataat acacagttat
     3061 agtgataatc acaggaaaag atgccttcta aagacttggg cataaaagct taaatattct
     3121 ttcttttaaa tgtctgttaa gaatatgatg ccaatggctt gaattgagtt cttttcaaga
     3181 actgatagac tatttggtat gaagtagcaa agctacctag gaaggttaaa aaattatgta
     3241 catcaaagat atcctagatg tagagacgat ggtgtctggg ataaaaggca gagttagttt
     3301 ctctcatagc atatattggc agaaatggtt ctgcaagatg ctcaaaggca tggaagaaac
     3361 atattactat ttattgttaa tatcatggtc atctgaagtt aagtactggg atatattttt
     3421 ctaatttcta gtgatcttag tatgcatatt tttttctaac ctttcaaaag tttgattcaa
     3481 ccgtcttacc ttgtagtgtt aagattccat acagagagcc ctgttatgca taccagtact
     3541 acaaaataaa ggggaaagaa ttcttgtaga tagaatccca agagagctca tttaattgtg
     3601 ctgtgacaat gaagattact ggaatgaatt tttgtctttt gtattttaat cacttgagtg
     3661 aatcaactat tagcaaattc catttggtgg cttagcattg gaaagaacag ataaagtagc
     3721 tgatgcctag aagatcctct gctttttccg atccagtggt agcctttgat actccaaagt
     3781 aattatgttc accctctgta ctaatgacat ttacaattct aaaattttat gaaattgaaa
     3841 tgaaaactaa gagttgtaaa acaaagtatt ttcttgggaa tattacttta acattcagat
     3901 ggatcataac taattcgact agggtgtttt tcctgagtag gagttaagtt tggaactggt
     3961 ggtcttgaat gttaaacatg gagtgtgact gggacagcca tgagtcagaa tataaatgaa
     4021 tgcttaaaca tttgaataca gattcctccg gattgttgaa ttcactcaac tagaagtaat
     4081 aggcgatttt aaatctttat aaatgatctt gggtaaatta ctggtgattg tgagggttgt
     4141 ttcccaatca aaggttattt ctagatggct atatgctttg ttgcaatttc tgcttccacc
     4201 tattttccaa gcattttact taagaaggat actgtgtagt tgaactaagg ctctttccag
     4261 gccgggcttg catcctgttg tgtattcttt gtatgctgct gactatatcc ctattctgct
     4321 gtaggggact agatttctaa tagagaacat tggcatggta gctgaagccc actcctgtgc
     4381 aagccatact ggaacttcat attgagaata gaagacgtag aaatcagatg gatttccaaa
     4441 gtggccaaac ttttcaactg taattttata aatgatacta cactgatata gccaattaga
     4501 tttaaaatgt cttcaaaaat tactttattt tatttaaagc atctgtttaa tgcaactttt
     4561 aatcagattt tgcaaagggt atgtatgtat tttaatatag tctgacctga atttatatgt
     4621 ttttagcttt agtatttaac cttttataac aaataaacca ttttttaaaa aaacaa
//
