LOCUS       NM_028128               1750 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus replication factor C (activator 1) 5 (Rfc5), mRNA.
ACCESSION   NM_028128 XM_132348
VERSION     NM_028128.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1750)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1750)
  AUTHORS   Vannier,J.B., Sandhu,S., Petalcorin,M.I., Wu,X., Nabi,Z., Ding,H.
            and Boulton,S.J.
  TITLE     RTEL1 is a replisome-associated helicase that promotes telomere and
            genome-wide replication
  JOURNAL   Science 342 (6155), 239-242 (2013)
   PUBMED   24115439
REFERENCE   3  (bases 1 to 1750)
  AUTHORS   Bunz,F., Kobayashi,R. and Stillman,B.
  TITLE     cDNAs encoding the large subunit of human replication factor C
  JOURNAL   Proc Natl Acad Sci U S A 90 (23), 11014-11018 (1993)
   PUBMED   8248204
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC089001.1.
            
            On Jul 24, 2006 this sequence version replaced XM_132348.6.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC089001.1, AK150036.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1750
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 56.88 cM"
     gene            1..1750
                     /gene="Rfc5"
                     /gene_synonym="2610020K06Rik; 2610209F07Rik; 36.5kDa;
                     36kDa; Recc5"
                     /note="replication factor C (activator 1) 5"
                     /db_xref="GeneID:72151"
                     /db_xref="MGI:MGI:1919401"
     exon            1..107
                     /gene="Rfc5"
                     /gene_synonym="2610020K06Rik; 2610209F07Rik; 36.5kDa;
                     36kDa; Recc5"
                     /inference="alignment:Splign:2.1.0"
     CDS             46..1065
                     /gene="Rfc5"
                     /gene_synonym="2610020K06Rik; 2610209F07Rik; 36.5kDa;
                     36kDa; Recc5"
                     /note="replication factor C 5; RFC36; A1 36 kDa subunit;
                     RF-C 36 kDa subunit; activator 1 subunit 5; activator 1 36
                     kDa subunit; replication factor C 36 kDa subunit;
                     replication factor C, 36 kDa"
                     /codon_start=1
                     /product="replication factor C subunit 5"
                     /protein_id="NP_082404.1"
                     /db_xref="CCDS:CCDS39235.1"
                     /db_xref="GeneID:72151"
                     /db_xref="MGI:MGI:1919401"
                     /translation="MTAAAPSQQRPAAARARNLPWVEKYRPQTLADLISHQDILSTIQ
                     KFISEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRG
                     PILSFASTRTIFKKGFKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKI
                     IPALQSRCTRFRFGPLTPELMVPRLEHVVQEENVDISEDGMKALVTLSSGDMRRALNI
                     LQSTNMAFGKVTEETVYTCTGHPLKTDIANILDWMLNQDFTTAYKNIMELKTLKGLAL
                     HDILTEVHLFVHRVDFPSSVRIHLLTKMADIEYRLSVGTSEKIQLSSLIAAFQVTRDL
                     IVAEA"
     exon            108..172
                     /gene="Rfc5"
                     /gene_synonym="2610020K06Rik; 2610209F07Rik; 36.5kDa;
                     36kDa; Recc5"
                     /inference="alignment:Splign:2.1.0"
     exon            173..309
                     /gene="Rfc5"
                     /gene_synonym="2610020K06Rik; 2610209F07Rik; 36.5kDa;
                     36kDa; Recc5"
                     /inference="alignment:Splign:2.1.0"
     exon            310..389
                     /gene="Rfc5"
                     /gene_synonym="2610020K06Rik; 2610209F07Rik; 36.5kDa;
                     36kDa; Recc5"
                     /inference="alignment:Splign:2.1.0"
     exon            390..463
                     /gene="Rfc5"
                     /gene_synonym="2610020K06Rik; 2610209F07Rik; 36.5kDa;
                     36kDa; Recc5"
                     /inference="alignment:Splign:2.1.0"
     exon            464..623
                     /gene="Rfc5"
                     /gene_synonym="2610020K06Rik; 2610209F07Rik; 36.5kDa;
                     36kDa; Recc5"
                     /inference="alignment:Splign:2.1.0"
     exon            624..705
                     /gene="Rfc5"
                     /gene_synonym="2610020K06Rik; 2610209F07Rik; 36.5kDa;
                     36kDa; Recc5"
                     /inference="alignment:Splign:2.1.0"
     exon            706..835
                     /gene="Rfc5"
                     /gene_synonym="2610020K06Rik; 2610209F07Rik; 36.5kDa;
                     36kDa; Recc5"
                     /inference="alignment:Splign:2.1.0"
     exon            836..913
                     /gene="Rfc5"
                     /gene_synonym="2610020K06Rik; 2610209F07Rik; 36.5kDa;
                     36kDa; Recc5"
                     /inference="alignment:Splign:2.1.0"
     exon            914..968
                     /gene="Rfc5"
                     /gene_synonym="2610020K06Rik; 2610209F07Rik; 36.5kDa;
                     36kDa; Recc5"
                     /inference="alignment:Splign:2.1.0"
     exon            969..1730
                     /gene="Rfc5"
                     /gene_synonym="2610020K06Rik; 2610209F07Rik; 36.5kDa;
                     36kDa; Recc5"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1706..1711
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rfc5"
                     /gene_synonym="2610020K06Rik; 2610209F07Rik; 36.5kDa;
                     36kDa; Recc5"
                     /note="hexamer: AATAAA"
     polyA_site      1730
                     /gene="Rfc5"
                     /gene_synonym="2610020K06Rik; 2610209F07Rik; 36.5kDa;
                     36kDa; Recc5"
                     /note="major polyA site"
ORIGIN      
        1 cgagtgcggc gggtcagtgg cagggacccg cagcatctgt cagtcatgac ggcggccgcg
       61 ccttcgcagc agcggcccgc ggcggcccgg gcccggaacc tgccctgggt tgagaagtac
      121 cggccacaga ccctggccga tctcatttct caccaggaca ttctgagtac cattcagaag
      181 ttcatcagtg aagaccgcct gccacaccta cttctctatg gccctccagg gacaggaaag
      241 acatccacca tcctggcctg tgccaagcaa ctgtacaaag ataaagaatt tggctccatg
      301 gtcttggagc tgaatgcttc tgacgaccga gggatcgata ttgttcgggg gccaatcctc
      361 agctttgcca gcacaaggac aatcttcaag aaagggttta agcttgtgat cctggacgaa
      421 gccgacgcca tgactcagga tgcccagaac gccttgagac gagtgattga gaagttcaca
      481 gaaaacacca ggttctgcct catctgtaac tacctgtcca agatcatccc tgccttgcag
      541 tctcggtgca cgaggttccg atttggccct ctgacacccg agctcatggt ccctcgactg
      601 gaacatgtag tacaagaaga gaatgtggat ataagtgaag atggaatgaa ggcccttgtc
      661 actctgtcca gtggggacat gcgaagggct ttgaacatcc ttcagagtac caatatggcc
      721 tttgggaagg tgacagagga gactgtctac acctgcaccg gacacccact caagacggac
      781 attgccaata tactggactg gatgctcaat caggacttca ccactgccta caaaaacatc
      841 atggagctga agactctgaa gggcttggcg ctgcatgaca tcctgacaga ggttcacttg
      901 tttgtacaca gagttgactt tccatcttca gttcggatac acttattgac caaaatggca
      961 gacatcgagt acagactttc tgttggcacc agtgagaaga tacagctgag ctccctcatc
     1021 gccgcttttc aagtcaccag agacctgata gttgcagagg cctagaagct ctgaggcctg
     1081 gcccctgggt gactggagga cagaggacat gctgccctgg gccactggat aaacccagtc
     1141 acagaagtct ctctgcaggc atttaggtac tgctctctgt ggctgtttgg agcagggatg
     1201 gacagggcaa ctttaatcca taatgatcga cactgcttgt ctttataggg gaaactaccc
     1261 tgtcccgtgg tgagggctgc ttcaaagtct ttactatcag tcactgggat gacaaattgg
     1321 ctgcagctga gttgcgtcct gtcttccaac tctaaatggg tgctagtagg tttctaatca
     1381 aatattttat tacaaaattt caaaatcagt cttttgccca aagtgctgac atgcctataa
     1441 cctcaggacc caggaggctg aggcagaatt gccaggcagc tgcaggtcag cctagtgaga
     1501 cagactctgt ctcaggaaca atgcagtggc ctttcccact tttagaaggc ttgccagcag
     1561 gttccaaatt ctattgtgaa aataggaaag aaactacaac agtttgcctt cagactgcac
     1621 acctcacttg ttggggggaa tggggcactg cagacgttcc tgccgcactg ctgggctgtg
     1681 tttttaccaa gtccttcaca ggaagaataa agcgtgtgtt cagagtttaa aaaaaaaaaa
     1741 aaaaaaaaaa
//
