LOCUS       XM_030253748            8465 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus arginine glutamic acid dipeptide (RE)
            repeats (Rere), transcript variant X10, mRNA.
ACCESSION   XM_030253748
VERSION     XM_030253748.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030253748.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8465
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..8465
                     /gene="Rere"
                     /gene_synonym="1110033A15Rik; ARG; ARP; ATN1L; Atr2; DNB1;
                     eye<m03Jus>; eyes3; mKIAA0458"
                     /note="arginine glutamic acid dipeptide (RE) repeats;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 mRNAs, 49 ESTs, 651 long SRA reads, 3
                     Proteins, and 98% coverage of the annotated genomic
                     feature by RNAseq alignments, including 42 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:68703"
                     /db_xref="MGI:MGI:2683486"
     CDS             1306..5988
                     /gene="Rere"
                     /gene_synonym="1110033A15Rik; ARG; ARP; ATN1L; Atr2; DNB1;
                     eye<m03Jus>; eyes3; mKIAA0458"
                     /codon_start=1
                     /product="arginine-glutamic acid dipeptide repeats protein
                     isoform X6"
                     /protein_id="XP_030109608.1"
                     /db_xref="GeneID:68703"
                     /db_xref="MGI:MGI:2683486"
                     /translation="MTADKDKDKDKEKDRDRDRDRERDKRDKARESENARPRRSCTLE
                     GGAKNYAESDHSEDEDNDNNSATTEESNKKSRKKPPKKKSRYERTDTGEITSYITEDD
                     VVYRPGDCVYIESRRPNTPYFICSIQDFKLVHSSQACCRSPAPAFCDPPACSLPVAPQ
                     PPQHLSEAGRGPGGSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVIT
                     DPVIKNRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARVDSFFYILGYNPET
                     RRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVSDCDLLMYLRAA
                     RSMAAFAGMCDGGSTEDGCVAASRDDTTLNALNTLHESSYDAGKALQRLVKKPVPKLI
                     EKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPSKETGELITFYYYWKKTPEAASSRAH
                     RRHRRQAVFRRIKTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACR
                     HCFTTTSKDWHHGGRENILLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEEDDGL
                     SGKHSMRTRRSRGSGQMSTLRSGRKKQPTSPDGRASPINEDIRSSGRNSPSAASTSSN
                     DSKAETVKKSAKKVKEEAASPLKSTKRQREKVASDTEDTDRITSKKTKTQEISRPNSP
                     SEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQP
                     PALQAPSGAASAPSTAPPGTPQLPTQGPTPSATAVPPQGSPATSQPPNQTQSTVAPAA
                     HTHIQQAPTLHPPRLPSPHPPLQPMTAPPSQSSAQPHPQPSLHSQGPPGPHSLQTGPL
                     LQHPGPPQPFGLPSQPSQGQGPLGPSPAAAHPHSTIQLPASQSALQPQQPPREQPLPP
                     APLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSLNANLPPPPALKPLSSLSTH
                     HPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQSLPPPAASHPTTGLHQVPSQSPFPQ
                     HPFVPGGPPPITPPSCPPTSTPPAGPSSSSQPPCSAAVSSGGSVPGAPSCPLPAVQIK
                     EEALDEAEEPESPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFM
                     PLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKEREREREREREAERAAKASS
                     SAHEGRLSDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARPHVMSPT
                     NRNHPFYMPLNPTDPLLAYHMPGLYNVDPTIRERELREREIREREIRERELRERMKPG
                     FEVKPPELDPLHPATNPMEHFARHSALTIPPAAGPHPFASFHPGLNPLERERLALAGP
                     QLRPEMSYPDRLAAERIHAERMASLTSDPLARLQMFNVTPHHHQHSHIHSHLHLHQQD
                     PLHQGSAGPVHPLVDPLTAGPHLARFPYPPGTLPNPLLGQPPHEHEMLRHPVFGTPYP
                     RDLPGAIPPPMSAAHQLQAMHAQSAELQRLAMEQQWLHGHPHMHGGHLPSQEDYYSRL
                     KKEGDKQL"
ORIGIN      
        1 tttctttttt ttttttcact tcagtttcgg tcaaacatta tttttaaaac attatgaact
       61 acccatcaga acaaataact tcgaatccac tctgtagctc cccttgaacc tcaaggaata
      121 ggaatctgtc tcttaaatga aataagcaat tatggctctg gtaataataa gagcaagggg
      181 acagtcgcca agcccacccc taagaccgac ccgcttgagg tagaccatcc cgagggtcag
      241 tacagggctg gccgctggga gctctgcctg tggccgagca gggcggacca agcacaaagc
      301 cgcgcctggg gcggggagcc catctcccag gttccggccg ccgcccggag cgtgcactaa
      361 gggctcggcc gcgccgccac caaagcctgg cctctcccct tgccttgcct tctgctcatt
      421 ttattaaaaa ggaagaaaaa aaaaaaaaaa gagagagaga agaaaaaaaa ggaggaaaaa
      481 aagaaaaaaa aaaaaaaaaa agaaaatgga agagcgagct ggagcaaaca tcccgccccc
      541 aggcccgcct tccgcctcct attggcccgt cctctactga cgtcacgaag agacagacca
      601 atggtgatgg tcgatactgc gaggtgggcc gggcccgagc gcggagtggg cggcgggtcg
      661 gcgcagcagc cccgcggctc cgccaccatc gcggaggtgc cgctgctccc acagacgctc
      721 gcgagccgcc ccccgcgctc cgcagcctct cgccccgccg ggcctcggtc cccgcctcct
      781 tccccgcgcc tcgtcccctc acgcgctccc caccttgttt ccgcctcatt ttctctccta
      841 gttgaggggt aggaaaaaaa aaaaaaaacc ctaccatcct ccggtgggag ccactcgccc
      901 tctgggaaaa aaaaatccac aaaaccagac atggtcctgg gctcccactg ctgaaggctt
      961 ggcccacccg aggaggtcga agtcccggca gggaagcccc gcagcccccc ggtgtcgcat
     1021 ccccgcgggc cggccccttc ggccccgcgc ccaccgccct cggtccgccg ccggcccccg
     1081 cggcctccct cccggtccct gcactttccc cggagcccgg ccgccacccc tctcattgat
     1141 ggtgtagcgc ccgaggggaa gaatatttga aacgttgggg ttgttggagt ggttggattt
     1201 tccctggaat tgagtgagaa attcagaaga ctgaagccca ggctcactgt ctacctttca
     1261 cggaggccta gccgtgagag gacagaagaa ggcacgtgga gaatcatgac agctgacaaa
     1321 gataaagaca aagacaaaga gaaggaccgg gaccgggatc gggaccgaga aagagataaa
     1381 agagacaaag caagagagag cgagaatgcc aggcctcgca ggagctgtac cttggaggga
     1441 ggagccaaaa actatgctga gagcgatcac agcgaggacg aagacaacga caacaacagc
     1501 gccaccacgg aggagtccaa caagaagagc agaaagaaac ctccgaaaaa aaagtcccgc
     1561 tacgagagga cagacactgg tgagataact tcttacatca ccgaggacga cgttgtctac
     1621 agaccgggag actgtgtgta tatcgagagt cggcggccaa acacaccgta tttcatctgc
     1681 agcatccaag acttcaaact ggtccacagc tcccaggcct gttgcagatc tccagctcct
     1741 gctttctgtg accccccagc atgctctctg ccggtggcac cacagccacc acagcacctc
     1801 tctgaagccg ggagagggcc tggagggagt aagagggacc atctactcat gaacgtcaaa
     1861 tggtactacc gtcagtctga agtcccagat tctgtctatc agcatttggt tcaggatcgg
     1921 cataatgaaa acgactctgg aagagagctt gtcatcacag atccagtcat caagaatcgg
     1981 gaactcttca tttctgatta tgttgacacc taccatgctg ctgccctaag agggaagtgt
     2041 aacatctccc atttttctga catatttgct gctcgagagt ttaaagcccg agtggactca
     2101 tttttctaca tattaggata caaccctgag acaaggcggc tgaatagtac ccaaggggaa
     2161 attcgagttg gccctagcca ccaggccaaa cttccagatc tgcaaccatt tccttctcca
     2221 gatggtgata ctgtgactca gcatgaggaa cttgtctgga tgcctggagt cagtgactgt
     2281 gacctcctca tgtacttgag ggcagcaagg agcatggcag catttgcagg gatgtgtgat
     2341 ggaggctcca cagaggatgg ctgtgttgca gcatctcggg atgacaccac tctcaatgca
     2401 ctgaacacac tacatgaaag cagttatgat gccggcaaag ccctgcagcg cctggtgaag
     2461 aagcctgtgc ccaagctgat cgagaagtgc tggacagagg atgaagtgaa acgcttcgtt
     2521 aaggggctcc gacaatacgg caagaacttc ttcagaatca gaaaggagct gcttcccagt
     2581 aaggaaaccg gggaactgat taccttctat tactactgga agaaaacacc agaggcggcc
     2641 agctcccgtg cccaccgccg ccaccgcagg caggcggtgt tcagaagaat taagactcgc
     2701 acagcgtcca cccctgtcaa cacgccctcc agaccacctt ccagtgaatt cttggacctg
     2761 agttcagcta gtgaggatga ctttgacagt gaggacagcg aacaggagct gaaggggtac
     2821 gcctgccgtc actgcttcac caccacctcc aaagactggc accacggggg ccgggaaaac
     2881 atcctactgt gcacggactg tcgcatccac ttcaagaagt acggtgagct gccacccatc
     2941 gagaagcccg tggacccccc gcccttcatg ttcaagcctg tcaaggagga ggacgatggg
     3001 ctcagtggga agcatagcat gaggacgcgg cggagccggg gctcggggca gatgtctaca
     3061 ctacgcagtg gtcggaagaa gcagcccacc agtcctgatg gtcgtgcctc acccatcaat
     3121 gaagacatcc gatccagtgg ccggaactcc cccagtgctg ctagcacttc cagcaatgac
     3181 agtaaagcag agacagtgaa gaagtcagcc aagaaggtga aggaagaggc tgcatcccct
     3241 ctgaagagca ccaagcgcca gcgggagaag gtggcctctg acacagaaga cactgatagg
     3301 atcacctcca aaaagacaaa gacccaggag attagccgtc ccaactctcc ctctgaagga
     3361 gagggggaga gttcggacag tcgcagtgtc aacgatgagg gcagcagtga cccgaaagac
     3421 attgaccagg ataatcgcag cacgtctccc agtatcccca gccctcagga taatgagagt
     3481 gactcggact catcagcaca gcagcagatg ttgcaggccc agcccccagc cttgcaagct
     3541 cccagtggtg ctgcctcggc tccctccaca gcccctccag gaacacccca gcttcccacc
     3601 caaggaccca caccctctgc cactgcagtc cctccacagg gctcccctgc aacctcacag
     3661 ccccctaacc agactcagtc tacagttgca cctgcagccc acacccacat ccaacaggca
     3721 cccaccctgc acccccctcg gctgccctca cctcatcctc cactgcagcc tatgactgca
     3781 ccgcctagcc agagctctgc acaacctcac ccccagccct ccttgcacag tcagggcccg
     3841 cctggccctc acagcctaca gactggaccc ctgttacagc acccaggacc tcctcagccc
     3901 tttggacttc cttcccagcc ctcccaaggt cagggccctc tgggcccctc cccggcagca
     3961 gctcatcctc atagcaccat acagcttcca gcgtcgcagt cagcgctgca gccccaacag
     4021 cccccaaggg aacagccctt gcctcctgcc cctttagcta tgcctcacat caaaccccca
     4081 cccaccacac caattcccca gcttccagca ccacaagccc acaaacatcc gcctcacctc
     4141 tcaggcccct cccccttctc tctgaatgcc aatctgccac ccccgccagc cctgaaaccc
     4201 ctgagctcac tgtccacaca ccaccctccc tcagcccacc ctccaccctt acaactcatg
     4261 cctcagagcc agcccttgcc ctcttcacct gcccagccac ctgggctgac ccagagccag
     4321 agcctaccac ctcctgctgc ctcccatcct accactggcc tccaccaggt gccctcccaa
     4381 tccccatttc cccagcaccc tttcgtacct ggaggccccc ctcccatcac cccgccctcc
     4441 tgccccccca cttccacccc tcctgccggg cccagctcct catcacagcc accctgctct
     4501 gctgctgtgt cttctggagg cagtgttcct ggggcgccat cttgcccact ccctgctgtg
     4561 caaatcaagg aggaggctct ggatgaagct gaggagccag agagccctcc tccacccccc
     4621 aggagcccat cccctgagcc cactgtagtg gacaccccca gccatgccag ccagtctgcc
     4681 aggttctaca aacacctgga ccggggctac aactcgtgtg cacggacaga cctgtacttc
     4741 atgcctctgg ctggatccaa actagccaag aagagggagg aggccattga gaaggccaag
     4801 cgggaggctg aacagaaagc ccgagaggaa cgggagcggg agaaagagaa ggaaaaagag
     4861 cgagaacggg agagagagcg ggaacgggag gcagagcgcg ctgctaaggc atccagctct
     4921 gcacatgaag gccgtcttag tgaccctcag ctcagtggcc cgggtcacat gcgaccctcc
     4981 ttcgagccac caccgaccac aatcgctgct gtgcccccat atattgggcc tgacacacct
     5041 gccctccgga cactgagcga atatgctcgg cctcatgtca tgtctcccac caaccgcaac
     5101 caccccttct acatgcccct taatcccacc gaccccctgc tggcctacca catgcctggc
     5161 ttgtacaatg ttgatcccac catccgcgag cgggagctcc gagagcgcga gatcagagag
     5221 cgcgagatcc gggagcggga attgcgggag aggatgaagc caggctttga ggtgaagccc
     5281 ccagagctgg accccctgca cccagccacc aaccccatgg agcattttgc ccggcacagc
     5341 gccctcacca tccctcctgc agctggcccc cacccctttg cctctttcca cccgggcctc
     5401 aaccctttgg agcgggagag actggcacta gcaggtcctc agctgcggcc tgagatgagt
     5461 tacccagaca gactggcagc cgagcgcatc catgctgagc gtatggcatc actcaccagc
     5521 gaccccctgg cacgactgca gatgtttaat gtcactccac accatcacca gcattcacac
     5581 atccactccc acctccacct ccaccagcag gatcctctcc accaaggttc agcaggccca
     5641 gttcaccccc tggttgaccc cttgactgct ggccctcact tagctcgctt cccctatccc
     5701 ccgggcaccc tccctaaccc tctacttgga cagccccctc acgagcacga gatgctgcgc
     5761 cacccagttt ttggcacccc ctatccccga gacctgcctg gggctattcc accccccatg
     5821 tcagcagccc accagcttca ggccatgcat gcccagtcag ccgagctaca gagactagcc
     5881 atggagcagc agtggctgca cggacatcca cacatgcatg gtggccatct gccaagtcag
     5941 gaggattatt acagtcgact gaagaaagaa ggtgacaagc agttataagt tatttatttg
     6001 ttaatgctgg ctgtggaaac cccagttcta gggggcagaa acaggacatt tacatctagt
     6061 aggggctgca agagcaaaga ggaatatcgt ctaaagattt ctctatatat ttaaaaccca
     6121 caactaaaac acatctgcat aatagtgttt gtttgttgag aggatttcct gagactggtt
     6181 tgggtctccc tgcatgacag tcccccagaa acttggtgtg tcctgggctg gactgacacc
     6241 cagaaagctt acctgcgagc ttggggtttg gcttgagttc tcttttcctt gatttctcag
     6301 taggtgctag agtccgttca cacccttcac tgtgcgcgca gacactgagg cacgtgggct
     6361 ctggaacccg cagggtttgc agagaggcgg catatgagtt tgaaatccaa gagctataat
     6421 ttttaaaaaa tcttttattt taatacattg taggaaatct tcataatttg agacagttct
     6481 gcagcatggc tttttacatc tgtaaataaa taattttaga agtctttttt tctttccaca
     6541 gacgactatt ctgatctatt ttttccagcc atgtcacaaa gtgtgaattc ctaccagcta
     6601 ttgacagagt acagagttga ttttttaata aaaagttata tataattatc cctttaatta
     6661 aagggaacag atgggcgttt ctagttttaa gcaggcagga gcttgggact aggtttggtc
     6721 acagcagcga gcatccaagg gttggcaggg acagtgttac aggctcttta ttttgctgct
     6781 ttgattttgc ttctgtctgc ccctcacatg tgcagtggca ggcgtgtttg agcgagcctc
     6841 cttccttatt catagggatt cagtgttgac tgttccctgg tgtccccgct gtcctgtgtc
     6901 gtctggtata gaaagcgcat gtttctgtat cggtgtctga tgataagttt ccttggagtt
     6961 ttatgcacat gtttgattgt tctagataaa ttgtcataaa cattctagga agttcaagaa
     7021 aatgatgcag tacccagcac atgaaagacc tacaacatgt gcttgccaaa ggaatgttag
     7081 aatctgctca tgtgtgtgtc accatgccaa gccatgccag ccacagactg aggcttccgg
     7141 gtgaggaaca ccctggggct actatgtttg taggtctcat gtgctcaggg ctatgaagta
     7201 ggctgtgcag gtgacagcac cctgctagga agctgtgtgt gtcctgcctt tcctcctgga
     7261 atatgtacgg atggaagtct tggttgaagc aggttcccct gggaagtgct ctcagcaggc
     7321 cttgcggagc agagcagagc tgggcagagc tgactcctgc cccgctgtcc ctgatggaac
     7381 cttccttcca gagctgtgga agagatgttt gtgacccctc ccttggactc ttgggggcca
     7441 atcccactct tgagtgcaat ggttgcattt agaatcagct agctagccag gggccatcct
     7501 gtgggtcagt agatgaggtg tgtcctggcc ctgcggagag aagaggcctg tggttcagct
     7561 ggcacgctct gctccaggct ctgactcagg ggtggctgag cctcatgctc ccagaaccat
     7621 gcatggggca gctaggatcc atttgtctgt tggaaatgtt tgtagctttt ttgttttgtt
     7681 ttttaacttt ctttttctca ttccatttct gccttaactt tggttcttca taggaggcaa
     7741 gctcaaatta accttttgcc atcaaacctt gtagccgtct tggcatgaag gcatgttttc
     7801 cttctggggg tggtgacatg ccctccagac ggcctgccat ccagccctct ggcctgagga
     7861 agacccccat aggctccgga caggcaggtc ctttctatcc catgccacca cttccttccc
     7921 cctttaactg agtctgctgt tcagttaagc ctttatttcc tctccagtac ccatttccaa
     7981 agagaaagag tgaagtactt tgaagtctgt acttgaaatc tgtctggaag tgtttccttg
     8041 ttagttttgg gtttctcccc tgtcccaagg ctcagagtct tcatctccta cgtgactgac
     8101 tacagttggt ttggaggccc tggacctctg tggcgtcttt gaagcctggc ctcttggctt
     8161 ccttttggac tttgcttgct ttcatttgaa gtttgggttt gctttctgtg ttctgtgcgt
     8221 atcttgttca gtgtcgtcaa ggttgggctt cacgtctcac tgcagtggag cgagcggaca
     8281 ttctgatcgc tgcatttctt tagatctcgg agctaagtgt atatatgagt agtttgccaa
     8341 tggataacac agtgtaaaca gtagacaccc agaaaatcgt gacttctgtg ttctctccat
     8401 ttgagtattt tgtaattttt ttgaaatatt tgtggacata aataaaacca agctacacta
     8461 cagca
//
