LOCUS       XM_030253747            8468 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus arginine glutamic acid dipeptide (RE)
            repeats (Rere), transcript variant X9, mRNA.
ACCESSION   XM_030253747
VERSION     XM_030253747.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030253747.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8468
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..8468
                     /gene="Rere"
                     /gene_synonym="1110033A15Rik; ARG; ARP; ATN1L; Atr2; DNB1;
                     eye<m03Jus>; eyes3; mKIAA0458"
                     /note="arginine glutamic acid dipeptide (RE) repeats;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 mRNAs, 48 ESTs, 632 long SRA reads, and
                     98% coverage of the annotated genomic feature by RNAseq
                     alignments, including 42 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:68703"
                     /db_xref="MGI:MGI:2683486"
     CDS             1306..5991
                     /gene="Rere"
                     /gene_synonym="1110033A15Rik; ARG; ARP; ATN1L; Atr2; DNB1;
                     eye<m03Jus>; eyes3; mKIAA0458"
                     /codon_start=1
                     /product="arginine-glutamic acid dipeptide repeats protein
                     isoform X5"
                     /protein_id="XP_030109607.1"
                     /db_xref="GeneID:68703"
                     /db_xref="MGI:MGI:2683486"
                     /translation="MTADKDKDKDKEKDRDRDRDRERDKRDKARESENARPRRSCTLE
                     GGAKNYAESDHSEDEDNDNNSATTEESNKKSRKKPPKKKSRYERTDTGEITSYITEDD
                     VVYRPGDCVYIESRRPNTPYFICSIQDFKLVHSSQACCRSPAPAFCDPPACSLPVAPQ
                     PPQHLSEAGRGPGGSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVIT
                     DPVIKNRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARVDSFFYILGYNPET
                     RRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVSDCDLLMYLRAA
                     RSMAAFAGMCDGGSTEDGCVAASRDDTTLNALNTLHESSYDAGKALQRLVKKPVPKLI
                     EKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPSKETGELITFYYYWKKTPEAASSRAH
                     RRHRRQAVFRRIKTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACR
                     HCFTTTSKDWHHGGRENILLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEEDDGL
                     SGKHSMRTRRSRGSGQMSTLRSGRKKQPTSPDGRASPINEDIRSSGRNSPSAASTSSN
                     DSKAETVKKSAKKVKEEAASPLKSTKRQREKVASDTEDTDRITSKKTKTQEISRPNSP
                     SEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQP
                     PALQAPSGAASAPSTAPPGTPQLPTQGPTPSATAVPPQGSPATSQPPNQTQSTVAPAA
                     HTHIQQAPTLHPPRLPSPHPPLQPMTAPPSQSSAQPHPQPSLHSQGPPGPHSLQTGPL
                     LQHPGPPQPFGLPSQPSQGQGPLGPSPAAAHPHSTIQLPASQSALQPQQPPREQPLPP
                     APLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSLNANLPPPPALKPLSSLSTH
                     HPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQSLPPPAASHPTTGLHQVPSQSPFPQ
                     HPFVPGGPPPITPPSCPPTSTPPAGPSSSSQPPCSAAVSSGGSVPGAPSCPLPAVQIK
                     EEALDEAEEPESPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTDLYFM
                     PLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKEREREREREREAERAAQKAS
                     SSAHEGRLSDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARPHVMSP
                     TNRNHPFYMPLNPTDPLLAYHMPGLYNVDPTIRERELREREIREREIRERELRERMKP
                     GFEVKPPELDPLHPATNPMEHFARHSALTIPPAAGPHPFASFHPGLNPLERERLALAG
                     PQLRPEMSYPDRLAAERIHAERMASLTSDPLARLQMFNVTPHHHQHSHIHSHLHLHQQ
                     DPLHQGSAGPVHPLVDPLTAGPHLARFPYPPGTLPNPLLGQPPHEHEMLRHPVFGTPY
                     PRDLPGAIPPPMSAAHQLQAMHAQSAELQRLAMEQQWLHGHPHMHGGHLPSQEDYYSR
                     LKKEGDKQL"
ORIGIN      
        1 tttctttttt ttttttcact tcagtttcgg tcaaacatta tttttaaaac attatgaact
       61 acccatcaga acaaataact tcgaatccac tctgtagctc cccttgaacc tcaaggaata
      121 ggaatctgtc tcttaaatga aataagcaat tatggctctg gtaataataa gagcaagggg
      181 acagtcgcca agcccacccc taagaccgac ccgcttgagg tagaccatcc cgagggtcag
      241 tacagggctg gccgctggga gctctgcctg tggccgagca gggcggacca agcacaaagc
      301 cgcgcctggg gcggggagcc catctcccag gttccggccg ccgcccggag cgtgcactaa
      361 gggctcggcc gcgccgccac caaagcctgg cctctcccct tgccttgcct tctgctcatt
      421 ttattaaaaa ggaagaaaaa aaaaaaaaaa gagagagaga agaaaaaaaa ggaggaaaaa
      481 aagaaaaaaa aaaaaaaaaa agaaaatgga agagcgagct ggagcaaaca tcccgccccc
      541 aggcccgcct tccgcctcct attggcccgt cctctactga cgtcacgaag agacagacca
      601 atggtgatgg tcgatactgc gaggtgggcc gggcccgagc gcggagtggg cggcgggtcg
      661 gcgcagcagc cccgcggctc cgccaccatc gcggaggtgc cgctgctccc acagacgctc
      721 gcgagccgcc ccccgcgctc cgcagcctct cgccccgccg ggcctcggtc cccgcctcct
      781 tccccgcgcc tcgtcccctc acgcgctccc caccttgttt ccgcctcatt ttctctccta
      841 gttgaggggt aggaaaaaaa aaaaaaaacc ctaccatcct ccggtgggag ccactcgccc
      901 tctgggaaaa aaaaatccac aaaaccagac atggtcctgg gctcccactg ctgaaggctt
      961 ggcccacccg aggaggtcga agtcccggca gggaagcccc gcagcccccc ggtgtcgcat
     1021 ccccgcgggc cggccccttc ggccccgcgc ccaccgccct cggtccgccg ccggcccccg
     1081 cggcctccct cccggtccct gcactttccc cggagcccgg ccgccacccc tctcattgat
     1141 ggtgtagcgc ccgaggggaa gaatatttga aacgttgggg ttgttggagt ggttggattt
     1201 tccctggaat tgagtgagaa attcagaaga ctgaagccca ggctcactgt ctacctttca
     1261 cggaggccta gccgtgagag gacagaagaa ggcacgtgga gaatcatgac agctgacaaa
     1321 gataaagaca aagacaaaga gaaggaccgg gaccgggatc gggaccgaga aagagataaa
     1381 agagacaaag caagagagag cgagaatgcc aggcctcgca ggagctgtac cttggaggga
     1441 ggagccaaaa actatgctga gagcgatcac agcgaggacg aagacaacga caacaacagc
     1501 gccaccacgg aggagtccaa caagaagagc agaaagaaac ctccgaaaaa aaagtcccgc
     1561 tacgagagga cagacactgg tgagataact tcttacatca ccgaggacga cgttgtctac
     1621 agaccgggag actgtgtgta tatcgagagt cggcggccaa acacaccgta tttcatctgc
     1681 agcatccaag acttcaaact ggtccacagc tcccaggcct gttgcagatc tccagctcct
     1741 gctttctgtg accccccagc atgctctctg ccggtggcac cacagccacc acagcacctc
     1801 tctgaagccg ggagagggcc tggagggagt aagagggacc atctactcat gaacgtcaaa
     1861 tggtactacc gtcagtctga agtcccagat tctgtctatc agcatttggt tcaggatcgg
     1921 cataatgaaa acgactctgg aagagagctt gtcatcacag atccagtcat caagaatcgg
     1981 gaactcttca tttctgatta tgttgacacc taccatgctg ctgccctaag agggaagtgt
     2041 aacatctccc atttttctga catatttgct gctcgagagt ttaaagcccg agtggactca
     2101 tttttctaca tattaggata caaccctgag acaaggcggc tgaatagtac ccaaggggaa
     2161 attcgagttg gccctagcca ccaggccaaa cttccagatc tgcaaccatt tccttctcca
     2221 gatggtgata ctgtgactca gcatgaggaa cttgtctgga tgcctggagt cagtgactgt
     2281 gacctcctca tgtacttgag ggcagcaagg agcatggcag catttgcagg gatgtgtgat
     2341 ggaggctcca cagaggatgg ctgtgttgca gcatctcggg atgacaccac tctcaatgca
     2401 ctgaacacac tacatgaaag cagttatgat gccggcaaag ccctgcagcg cctggtgaag
     2461 aagcctgtgc ccaagctgat cgagaagtgc tggacagagg atgaagtgaa acgcttcgtt
     2521 aaggggctcc gacaatacgg caagaacttc ttcagaatca gaaaggagct gcttcccagt
     2581 aaggaaaccg gggaactgat taccttctat tactactgga agaaaacacc agaggcggcc
     2641 agctcccgtg cccaccgccg ccaccgcagg caggcggtgt tcagaagaat taagactcgc
     2701 acagcgtcca cccctgtcaa cacgccctcc agaccacctt ccagtgaatt cttggacctg
     2761 agttcagcta gtgaggatga ctttgacagt gaggacagcg aacaggagct gaaggggtac
     2821 gcctgccgtc actgcttcac caccacctcc aaagactggc accacggggg ccgggaaaac
     2881 atcctactgt gcacggactg tcgcatccac ttcaagaagt acggtgagct gccacccatc
     2941 gagaagcccg tggacccccc gcccttcatg ttcaagcctg tcaaggagga ggacgatggg
     3001 ctcagtggga agcatagcat gaggacgcgg cggagccggg gctcggggca gatgtctaca
     3061 ctacgcagtg gtcggaagaa gcagcccacc agtcctgatg gtcgtgcctc acccatcaat
     3121 gaagacatcc gatccagtgg ccggaactcc cccagtgctg ctagcacttc cagcaatgac
     3181 agtaaagcag agacagtgaa gaagtcagcc aagaaggtga aggaagaggc tgcatcccct
     3241 ctgaagagca ccaagcgcca gcgggagaag gtggcctctg acacagaaga cactgatagg
     3301 atcacctcca aaaagacaaa gacccaggag attagccgtc ccaactctcc ctctgaagga
     3361 gagggggaga gttcggacag tcgcagtgtc aacgatgagg gcagcagtga cccgaaagac
     3421 attgaccagg ataatcgcag cacgtctccc agtatcccca gccctcagga taatgagagt
     3481 gactcggact catcagcaca gcagcagatg ttgcaggccc agcccccagc cttgcaagct
     3541 cccagtggtg ctgcctcggc tccctccaca gcccctccag gaacacccca gcttcccacc
     3601 caaggaccca caccctctgc cactgcagtc cctccacagg gctcccctgc aacctcacag
     3661 ccccctaacc agactcagtc tacagttgca cctgcagccc acacccacat ccaacaggca
     3721 cccaccctgc acccccctcg gctgccctca cctcatcctc cactgcagcc tatgactgca
     3781 ccgcctagcc agagctctgc acaacctcac ccccagccct ccttgcacag tcagggcccg
     3841 cctggccctc acagcctaca gactggaccc ctgttacagc acccaggacc tcctcagccc
     3901 tttggacttc cttcccagcc ctcccaaggt cagggccctc tgggcccctc cccggcagca
     3961 gctcatcctc atagcaccat acagcttcca gcgtcgcagt cagcgctgca gccccaacag
     4021 cccccaaggg aacagccctt gcctcctgcc cctttagcta tgcctcacat caaaccccca
     4081 cccaccacac caattcccca gcttccagca ccacaagccc acaaacatcc gcctcacctc
     4141 tcaggcccct cccccttctc tctgaatgcc aatctgccac ccccgccagc cctgaaaccc
     4201 ctgagctcac tgtccacaca ccaccctccc tcagcccacc ctccaccctt acaactcatg
     4261 cctcagagcc agcccttgcc ctcttcacct gcccagccac ctgggctgac ccagagccag
     4321 agcctaccac ctcctgctgc ctcccatcct accactggcc tccaccaggt gccctcccaa
     4381 tccccatttc cccagcaccc tttcgtacct ggaggccccc ctcccatcac cccgccctcc
     4441 tgccccccca cttccacccc tcctgccggg cccagctcct catcacagcc accctgctct
     4501 gctgctgtgt cttctggagg cagtgttcct ggggcgccat cttgcccact ccctgctgtg
     4561 caaatcaagg aggaggctct ggatgaagct gaggagccag agagccctcc tccacccccc
     4621 aggagcccat cccctgagcc cactgtagtg gacaccccca gccatgccag ccagtctgcc
     4681 aggttctaca aacacctgga ccggggctac aactcgtgtg cacggacaga cctgtacttc
     4741 atgcctctgg ctggatccaa actagccaag aagagggagg aggccattga gaaggccaag
     4801 cgggaggctg aacagaaagc ccgagaggaa cgggagcggg agaaagagaa ggaaaaagag
     4861 cgagaacggg agagagagcg ggaacgggag gcagagcgcg ctgctcagaa ggcatccagc
     4921 tctgcacatg aaggccgtct tagtgaccct cagctcagtg gcccgggtca catgcgaccc
     4981 tccttcgagc caccaccgac cacaatcgct gctgtgcccc catatattgg gcctgacaca
     5041 cctgccctcc ggacactgag cgaatatgct cggcctcatg tcatgtctcc caccaaccgc
     5101 aaccacccct tctacatgcc ccttaatccc accgaccccc tgctggccta ccacatgcct
     5161 ggcttgtaca atgttgatcc caccatccgc gagcgggagc tccgagagcg cgagatcaga
     5221 gagcgcgaga tccgggagcg ggaattgcgg gagaggatga agccaggctt tgaggtgaag
     5281 cccccagagc tggaccccct gcacccagcc accaacccca tggagcattt tgcccggcac
     5341 agcgccctca ccatccctcc tgcagctggc ccccacccct ttgcctcttt ccacccgggc
     5401 ctcaaccctt tggagcggga gagactggca ctagcaggtc ctcagctgcg gcctgagatg
     5461 agttacccag acagactggc agccgagcgc atccatgctg agcgtatggc atcactcacc
     5521 agcgaccccc tggcacgact gcagatgttt aatgtcactc cacaccatca ccagcattca
     5581 cacatccact cccacctcca cctccaccag caggatcctc tccaccaagg ttcagcaggc
     5641 ccagttcacc ccctggttga ccccttgact gctggccctc acttagctcg cttcccctat
     5701 cccccgggca ccctccctaa ccctctactt ggacagcccc ctcacgagca cgagatgctg
     5761 cgccacccag tttttggcac cccctatccc cgagacctgc ctggggctat tccacccccc
     5821 atgtcagcag cccaccagct tcaggccatg catgcccagt cagccgagct acagagacta
     5881 gccatggagc agcagtggct gcacggacat ccacacatgc atggtggcca tctgccaagt
     5941 caggaggatt attacagtcg actgaagaaa gaaggtgaca agcagttata agttatttat
     6001 ttgttaatgc tggctgtgga aaccccagtt ctagggggca gaaacaggac atttacatct
     6061 agtaggggct gcaagagcaa agaggaatat cgtctaaaga tttctctata tatttaaaac
     6121 ccacaactaa aacacatctg cataatagtg tttgtttgtt gagaggattt cctgagactg
     6181 gtttgggtct ccctgcatga cagtccccca gaaacttggt gtgtcctggg ctggactgac
     6241 acccagaaag cttacctgcg agcttggggt ttggcttgag ttctcttttc cttgatttct
     6301 cagtaggtgc tagagtccgt tcacaccctt cactgtgcgc gcagacactg aggcacgtgg
     6361 gctctggaac ccgcagggtt tgcagagagg cggcatatga gtttgaaatc caagagctat
     6421 aatttttaaa aaatctttta ttttaataca ttgtaggaaa tcttcataat ttgagacagt
     6481 tctgcagcat ggctttttac atctgtaaat aaataatttt agaagtcttt ttttctttcc
     6541 acagacgact attctgatct attttttcca gccatgtcac aaagtgtgaa ttcctaccag
     6601 ctattgacag agtacagagt tgatttttta ataaaaagtt atatataatt atccctttaa
     6661 ttaaagggaa cagatgggcg tttctagttt taagcaggca ggagcttggg actaggtttg
     6721 gtcacagcag cgagcatcca agggttggca gggacagtgt tacaggctct ttattttgct
     6781 gctttgattt tgcttctgtc tgcccctcac atgtgcagtg gcaggcgtgt ttgagcgagc
     6841 ctccttcctt attcataggg attcagtgtt gactgttccc tggtgtcccc gctgtcctgt
     6901 gtcgtctggt atagaaagcg catgtttctg tatcggtgtc tgatgataag tttccttgga
     6961 gttttatgca catgtttgat tgttctagat aaattgtcat aaacattcta ggaagttcaa
     7021 gaaaatgatg cagtacccag cacatgaaag acctacaaca tgtgcttgcc aaaggaatgt
     7081 tagaatctgc tcatgtgtgt gtcaccatgc caagccatgc cagccacaga ctgaggcttc
     7141 cgggtgagga acaccctggg gctactatgt ttgtaggtct catgtgctca gggctatgaa
     7201 gtaggctgtg caggtgacag caccctgcta ggaagctgtg tgtgtcctgc ctttcctcct
     7261 ggaatatgta cggatggaag tcttggttga agcaggttcc cctgggaagt gctctcagca
     7321 ggccttgcgg agcagagcag agctgggcag agctgactcc tgccccgctg tccctgatgg
     7381 aaccttcctt ccagagctgt ggaagagatg tttgtgaccc ctcccttgga ctcttggggg
     7441 ccaatcccac tcttgagtgc aatggttgca tttagaatca gctagctagc caggggccat
     7501 cctgtgggtc agtagatgag gtgtgtcctg gccctgcgga gagaagaggc ctgtggttca
     7561 gctggcacgc tctgctccag gctctgactc aggggtggct gagcctcatg ctcccagaac
     7621 catgcatggg gcagctagga tccatttgtc tgttggaaat gtttgtagct tttttgtttt
     7681 gttttttaac tttctttttc tcattccatt tctgccttaa ctttggttct tcataggagg
     7741 caagctcaaa ttaacctttt gccatcaaac cttgtagccg tcttggcatg aaggcatgtt
     7801 ttccttctgg gggtggtgac atgccctcca gacggcctgc catccagccc tctggcctga
     7861 ggaagacccc cataggctcc ggacaggcag gtcctttcta tcccatgcca ccacttcctt
     7921 ccccctttaa ctgagtctgc tgttcagtta agcctttatt tcctctccag tacccatttc
     7981 caaagagaaa gagtgaagta ctttgaagtc tgtacttgaa atctgtctgg aagtgtttcc
     8041 ttgttagttt tgggtttctc ccctgtccca aggctcagag tcttcatctc ctacgtgact
     8101 gactacagtt ggtttggagg ccctggacct ctgtggcgtc tttgaagcct ggcctcttgg
     8161 cttccttttg gactttgctt gctttcattt gaagtttggg tttgctttct gtgttctgtg
     8221 cgtatcttgt tcagtgtcgt caaggttggg cttcacgtct cactgcagtg gagcgagcgg
     8281 acattctgat cgctgcattt ctttagatct cggagctaag tgtatatatg agtagtttgc
     8341 caatggataa cacagtgtaa acagtagaca cccagaaaat cgtgacttct gtgttctctc
     8401 catttgagta ttttgtaatt tttttgaaat atttgtggac ataaataaaa ccaagctaca
     8461 ctacagca
//
