LOCUS       XM_006529506            5360 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus RAB11 binding and LisH domain, coiled-coil
            and HEAT repeat containing (Relch), transcript variant X8, mRNA.
ACCESSION   XM_006529506
VERSION     XM_006529506.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000067.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006529506.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5360
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="1"
     gene            1..5360
                     /gene="Relch"
                     /gene_synonym="2310035C23Rik; 6430401N10; Kiaa1468;
                     mKIAA1468"
                     /note="RAB11 binding and LisH domain, coiled-coil and HEAT
                     repeat containing; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 mRNAs, 60 ESTs, 1045
                     long SRA reads, 1 Protein, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     6 samples with support for all annotated introns"
                     /db_xref="GeneID:227446"
                     /db_xref="MGI:MGI:1922832"
     CDS             260..3862
                     /gene="Relch"
                     /gene_synonym="2310035C23Rik; 6430401N10; Kiaa1468;
                     mKIAA1468"
                     /codon_start=1
                     /product="RAB11-binding protein RELCH isoform X8"
                     /protein_id="XP_006529569.1"
                     /db_xref="GeneID:227446"
                     /db_xref="MGI:MGI:1922832"
                     /translation="MAAMAPGGGGSGSGVNPFLSDSDEDDDEVAATEDRRAGLRLGAG
                     VGLDPGSAGSLSPQDPMALGSSARPGLAVEMSAAPAAPGGSGETPARLSIDAIAAQLL
                     RDQYLLTALELHTELLESGRELPRLRDYFSNPGNFERQSGTPPGMGAPGIPGASIVGG
                     AGGREPSTTSGGGQLNRAGSISTLDSLDFARYSDDGNRETDERVAEHEVPLQERKNYK
                     SSPEIQEPIKPLEKRALNFLVNEFLLKNNYKLTSITFSDENDDQDFELWDDVGLNIPK
                     PPDLLQLYRDFGNHQVTGKDLVDVASGVDEDELEALTPILGNVPPTLDTPLPIENTLL
                     VQKLEDKISLLNNEKWSLMEQIRRLESEMDILKAEHFATPAVGDSVQPSLVWSSQKDS
                     EDNRQSPAVNSSDQEKTKDVHLEIPDAADSFIPKENSSGSFPRKEREELPPSSVSNKT
                     TLHFDQPNRKLSPAFHQALLSFCRMSADSRLGSEVSRIADSEKSVMLMLGRCLPHIVP
                     NVLLAKRERMVLHLCQELIPLILCTACLHPEPKERDQLLHILFNLIKRPDDEQRQMIL
                     TGCVAFARHVGPTRVEAELLPQCWEQINHKYPERRLLVAESCGALAPYLPKEIRSSLV
                     LSMLQQMLMEDKADLVREAVIKSLGIIMGYIDDPDKYQQGFELLLSALGDPSERVVSA
                     THQVFLPAYAAWTTELGNLQSHLIPTLLNKIEKLLREGEHGLDEHKLHMYLSALQSLI
                     PSLFALVLQNAPFSSKAKLHGEVPHIEVTRFPRPMSPLQDVSTIIGSREQLAVLLQLY
                     DYQLEHEGTTGWESLLWVVNQLLPQLIEIVGKINVTSTACVHEFSRFFWRLCRTFGKI
                     FTNTKVKPQFQEILRLSEENIDSSAGNGVLTKATVPIYATGVLTCYIQEEDRKLLVGF
                     LEDVMTLLSLSHAPLDSLKASFVELGANPAYHELLLTVLWYGVVHTSALVRCTAARMF
                     ELLVKGVNETLVAQRVVPALITLSSDPEISVRIATIPAFGTIMETVIQRELLERVKMQ
                     LASFLEDPQYQDQHSLHTEVIRTFGRVGPNAEPRFRDEFVIPHLHKLALVNNLQIVDS
                     KKLDIATHLFEAYSALSCCFISEDLMVNHFLPGLRCLRTDMEHLSPEHEVILSSMIKE
                     CEQKVENKTVQEPPGSMSIAASLVSEDTKTKFLNKMGQLTTSGAMLANVFQRKK"
ORIGIN      
        1 tgggaccaag ccagttctcg cgagactagg gaccaggaag acgcctgcag agtcggctac
       61 tggtgcagca gcggctgaga cgggaggtgc tgctgcatac cgggctcctg cctcccagtc
      121 cggcctaggc tctaggtgag gagaggtgcg gtcggcctgg gctgcctagg tggtcggcgg
      181 ctctcgggac ctaacgggga ttcaggctga gggcctgtcg ggccaagcag ggaagcaccc
      241 acattcctga cagaataaga tggcggcgat ggcgcccgga ggtggtggca gtggtagcgg
      301 agtaaatcct ttcctcagtg attcggatga ggacgacgac gaggtagcgg caaccgagga
      361 ccggcgggca ggacttcggc tgggtgccgg ggtcggccta gatcctggtt ctgcaggctc
      421 cctgtcgcca caggacccca tggccctggg aagcagcgcg cggccggggc tcgctgtgga
      481 gatgtccgcc gccccggcgg ctccgggggg cagcggggag acccctgccc gattgtcaat
      541 cgatgccatc gccgctcagc tgttgcgcga tcaatacttg ctgaccgccc tggagctgca
      601 caccgagctg ttggagagcg gccgcgagct accacgactg cgcgattact tctccaatcc
      661 tggcaacttc gagaggcaga gtgggacccc cccagggatg ggggcgcccg ggatccctgg
      721 cgcctccatc gtcggaggcg ctggaggtcg ggaaccgagt acgacgtcgg gcggaggaca
      781 gctcaatcga gctgggagca ttagtactct tgactcatta gactttgcaa gatattcaga
      841 tgatggtaac agggaaacag atgaaagagt ggcggaacat gaagttcctt tacaggaacg
      901 aaaaaattat aaatcaagtc ctgaaattca ggagccaatc aaacctcttg aaaagagagc
      961 tctcaacttc ctagtcaatg agtttttgtt aaagaataac tacaagctta catcaataac
     1021 cttttcagat gaaaatgatg atcaggattt tgaattatgg gatgatgtag gattaaacat
     1081 tcccaaaccc ccagacttgt tacaacttta ccgagacttt ggaaatcatc aagtgactgg
     1141 gaaagatctt gtggatgtgg ccagtggagt agatgaagat gaattagagg ctcttacacc
     1201 aattttaggc aacgtccctc caacccttga tactcccctg cctatagaga acaccttgct
     1261 agtacagaaa ttagaagata aaattagttt attaaataat gaaaaatggt cattgatgga
     1321 gcaaatcaga aggcttgaaa gtgagatgga catcctcaaa gctgaacact ttgccacccc
     1381 agcagttggt gattctgttc agccttcctt ggtttggtct tcccaaaagg attctgaaga
     1441 caatagacaa agcccagctg taaatagttc agaccaggaa aaaaccaagg atgttcatct
     1501 tgaaatacca gatgcagctg attcctttat tcctaaagag aattcgtcag gttctttccc
     1561 caggaaggaa agagaagagc tgccaccttc ttctgtatca aataaaacca cgctccattt
     1621 cgatcagccc aataggaaat tgtcacctgc tttccaccaa gcactactct ctttttgtcg
     1681 aatgtcagca gatagtcggt taggatcaga ggtgtctagg attgcagaca gtgaaaaaag
     1741 tgttatgtta atgctgggac gctgcctgcc acacattgtt cctaatgtgc tgttggcaaa
     1801 aagagagaga atggttttac acctctgtca ggagttgatt cctctcatat tgtgtacagc
     1861 atgcctgcac cctgaaccta aagaaagaga ccagctcctc catatcctct tcaacctgat
     1921 caagaggcca gatgatgagc aaaggcaaat gatactgaca ggatgtgtgg catttgcacg
     1981 tcatgttgga ccaacacgtg tggaggctga acttttacct cagtgttggg aacagattaa
     2041 tcacaaatat ccagaaagac gactgctcgt ggcagagtcc tgtggagcat tggcacctta
     2101 ccttcctaaa gaaatccgta gttccctggt tctttcaatg ttgcaacaga tgttaatgga
     2161 agataaggct gatttggtaa gagaagctgt gattaaaagc ctgggtatca ttatgggcta
     2221 cattgatgat cctgacaaat atcaacaggg ctttgaattg ttgctctctg ccctgggtga
     2281 tccctcagaa agagttgtta gtgcaacaca ccaagtattt ttaccagcct atgctgcctg
     2341 gacaactgaa cttggaaact tacagtctca tcttatacct acactactga acaagattga
     2401 aaagcttctc agggaaggag agcacgggct ggacgaacac aagctccaca tgtatctttc
     2461 tgccttgcag tccttgatcc catctctctt tgcattagtg ctacagaacg cacctttctc
     2521 cagcaaagcc aagctgcatg gtgaagtacc acatattgaa gtgactaggt tccctcggcc
     2581 tatgtcacct ctgcaagatg tgtctactat tattggaagt cgtgagcaat tggcagtgct
     2641 actacaactt tatgattacc aactggaaca tgaaggcaca acaggctggg agagtttact
     2701 ctgggttgtc aatcaattgt tgccacagct tatagaaata gtgggcaaaa ttaatgtaac
     2761 ctcaactgcc tgtgtccatg aattctccag atttttctgg cgtctttgcc ggacatttgg
     2821 caaaattttt acaaacacta aggtaaaacc ccagttccaa gagattttaa gactctctga
     2881 agaaaatatt gattcctcag caggaaatgg ggtcctcact aaagctactg tccccattta
     2941 tgcaacagga gtcctcacgt gttacattca ggaagaggac cgaaagctgt tagttggctt
     3001 cttggaagat gtgatgacac tgctttcact gtctcatgct cctcttgaca gcctgaaggc
     3061 ttcttttgtg gaacttggtg caaacccggc ctatcatgag ctgctgctaa ctgttctgtg
     3121 gtatggtgtt gttcatactt ctgcacttgt caggtgtact gctgctagga tgtttgagct
     3181 gttggtgaag ggggtgaatg agactctggt agctcagagg gttgttcctg ctctcattac
     3241 tctctccagt gaccctgaaa tctctgtcag gattgctaca atcccagcat ttggcactat
     3301 tatggaaaca gttattcaga gagagttgct agaaagagtg aagatgcagt tggcttcttt
     3361 cctggaagac cctcagtacc aagaccagca ttctttgcat acagaggtca tccgaacatt
     3421 tggcagagtc gggcctaatg cagaaccccg gttccgagat gagtttgtta taccacattt
     3481 acataaatta gccttggtga acaacttaca aattgtagat tcgaaaaaac tggacattgc
     3541 gactcatctt tttgaagcct acagtgcact ctcctgttgt ttcatttcag aggatttaat
     3601 ggtaaatcac ttcttacctg gcctcagatg tttacggact gacatggaac atctgtctcc
     3661 agaacatgag gttattttaa gttccatgat aaaagaatgt gaacaaaaag tagaaaacaa
     3721 gactgtccaa gagcctccag gctcaatgtc aattgctgca agtttagtga gtgaagacac
     3781 aaagaccaag tttttgaaca aaatgggcca gttgacaaca tcaggtgcca tgctggccaa
     3841 tgtgtttcag agaaagaagt agaagcggga ggcccgcccc ggtggacact aagatggacc
     3901 tcaagtagac tgctccttgt acttgaagcg cttacctttt gatttcctga ctttatgttc
     3961 ttgtgttata atgttatcct aacctccaaa gatatttgca ctgcttttaa ttattgctgt
     4021 gtatctattt ctttgggtat tataactgtg gtaatagaaa cttgatttaa tggtctgtac
     4081 caagtcccta ttctatgttc ttatttttga gaataacttt tatatataat atatatatgt
     4141 atagtgaaga ggggtttttt tgcttttgtt tttttaattt ttatttttgg atgggatatt
     4201 cacaaatatc tgtattatac tctaagctat tacaatggta cttaaaataa tgtaaatttg
     4261 aagtcattgt tataaagtaa taaaagtgga aattacttaa gtatttaaat tatgaaagaa
     4321 taatgcagac tttttattat ttcttaactg actagaaaga gccaccagca ttactctgtg
     4381 ccttttggac ttgagtttgt atgttctgta ggaactacat gcattccttt cacacagtat
     4441 ttcaggctgc tgtggtgaat ttgaatggca gatcctacag tcaatagata atgatgagac
     4501 ttacaacatt tcacatctct cttgagaatc ctttaagtgc tgtttagcct cccaacacat
     4561 agatgcatag gatggagttc cctgaggaaa acagcacttg agcatggtga ggagtagcca
     4621 gggtgaattt cacaacattt gtactagatt tagatgctca agaataaatg tactgagaag
     4681 agttaataat tgtttattcc caaattgaaa tacacaagaa aatataattt aagtctgaaa
     4741 tttaacgcct acttcctata acacatttta ggatgctttc tgatgattta aactttgcag
     4801 tttacttttt catcctgtat gagaagtact aagtaagttt aggacatttg gggttccttt
     4861 ttcccttcta aagtgaaagt gatgttagtt aagttattat tggtttgttg ccacctggta
     4921 ccttaaactc ggtggctatt cccattgctg tgttttattt gtatagtctt acgttgatag
     4981 acagccccac tggaattgac caattgtcta cacagcgaca cagagtgttg tgtatgaaac
     5041 ggagtaactg gcttaagggg ttaatgtgag gccttacaca gttgacgcat atacatgatt
     5101 ctcatattta ttgtgtaaat tggctttaat acacttggat cacattcact tcctgtggaa
     5161 aagctagctt tcccatgcag tcaaagctta taaagttatt tgccttaggc aaagccattc
     5221 atttctttta cctatagtga aattattgaa tagtagtttt tctgaactgt tggattctag
     5281 gcattcctga gaaattgaaa gtggctacct ttcatgtcaa aatgttgatc tgttataaat
     5341 aaatgttttg catacttgtt
//
