LOCUS       XM_006529505            5412 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus RAB11 binding and LisH domain, coiled-coil
            and HEAT repeat containing (Relch), transcript variant X5, mRNA.
ACCESSION   XM_006529505
VERSION     XM_006529505.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000067.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006529505.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5412
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="1"
     gene            1..5412
                     /gene="Relch"
                     /gene_synonym="2310035C23Rik; 6430401N10; Kiaa1468;
                     mKIAA1468"
                     /note="RAB11 binding and LisH domain, coiled-coil and HEAT
                     repeat containing; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 mRNAs, 62 ESTs, 1004
                     long SRA reads, 1 Protein, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     24 samples with support for all annotated introns"
                     /db_xref="GeneID:227446"
                     /db_xref="MGI:MGI:1922832"
     CDS             264..3914
                     /gene="Relch"
                     /gene_synonym="2310035C23Rik; 6430401N10; Kiaa1468;
                     mKIAA1468"
                     /codon_start=1
                     /product="RAB11-binding protein RELCH isoform X5"
                     /protein_id="XP_006529568.1"
                     /db_xref="GeneID:227446"
                     /db_xref="MGI:MGI:1922832"
                     /translation="MAAMAPGGGGSGSGVNPFLSDSDEDDDEVAATEDRRAGLRLGAG
                     VGLDPGSAGSLSPQDPMALGSSARPGLAVEMSAAPAAPGGSGETPARLSIDAIAAQLL
                     RDQYLLTALELHTELLESGRELPRLRDYFSNPGNFERQSGTPPGMGAPGIPGASIVGG
                     AGGREPSTTSGGGQLNRAGSISTLDSLDFARYSDDGNRETDERVAVLEFELRKAKETI
                     QALRANLTKAAEHEVPLQERKNYKSSPEIQEPIKPLEKRALNFLVNEFLLKNNYKLTS
                     ITFSDENDDQDFELWDDVGLNIPKPPDLLQLYRDFGNHQVTGKDLVDVASGVDEDELE
                     ALTPILGNVPPTLDTPLPIENTLLVQKLEDKISLLNNEKWSLMEQIRRLESEMDILKA
                     EHFATPAVGDSVQPSLVWSSQKDSEDNRQSPAVNSSDQEKTKDVHLEIPDAADSFIPK
                     ENSSGSFPRKEREELPPSSVSNKTTLHFDQPNRKLSPAFHQALLSFCRMSADSRLGSE
                     VSRIADSEKSVMLMLGRCLPHIVPNVLLAKREELIPLILCTACLHPEPKERDQLLHIL
                     FNLIKRPDDEQRQMILTGCVAFARHVGPTRVEAELLPQCWEQINHKYPERRLLVAESC
                     GALAPYLPKEIRSSLVLSMLQQMLMEDKADLVREAVIKSLGIIMGYIDDPDKYQQGFE
                     LLLSALGDPSERVVSATHQVFLPAYAAWTTELGNLQSHLIPTLLNKIEKLLREGEHGL
                     DEHKLHMYLSALQSLIPSLFALVLQNAPFSSKAKLHGEVPHIEVTRFPRPMSPLQDVS
                     TIIGSREQLAVLLQLYDYQLEHEGTTGWESLLWVVNQLLPQLIEIVGKINVTSTACVH
                     EFSRFFWRLCRTFGKIFTNTKVKPQFQEILRLSEENIDSSAGNGVLTKATVPIYATGV
                     LTCYIQEEDRKLLVGFLEDVMTLLSLSHAPLDSLKASFVELGANPAYHELLLTVLWYG
                     VVHTSALVRCTAARMFELTLRGMSEALVDKRVAPALVTLSGDPEFSVRIATIPAFGTI
                     METVIQRELLERVKMQLASFLEDPQYQDQHSLHTEVIRTFGRVGPNAEPRFRDEFVIP
                     HLHKLALVNNLQIVDSKKLDIATHLFEAYSALSCCFISEDLMVNHFLPGLRCLRTDME
                     HLSPEHEVILSSMIKECEQKVENKTVQEPPGSMSIAASLVSEDTKTKFLNKMGQLTTS
                     GAMLANVFQRKK"
ORIGIN      
        1 aagatgggac caagccagtt ctcgcgagac tagggaccag gaagacgcct gcagagtcgg
       61 ctactggtgc agcagcggct gagacgggag gtgctgctgc ataccgggct cctgcctccc
      121 agtccggcct aggctctagg tgaggagagg tgcggtcggc ctgggctgcc taggtggtcg
      181 gcggctctcg ggacctaacg gggattcagg ctgagggcct gtcgggccaa gcagggaagc
      241 acccacattc ctgacagaat aagatggcgg cgatggcgcc cggaggtggt ggcagtggta
      301 gcggagtaaa tcctttcctc agtgattcgg atgaggacga cgacgaggta gcggcaaccg
      361 aggaccggcg ggcaggactt cggctgggtg ccggggtcgg cctagatcct ggttctgcag
      421 gctccctgtc gccacaggac cccatggccc tgggaagcag cgcgcggccg gggctcgctg
      481 tggagatgtc cgccgccccg gcggctccgg ggggcagcgg ggagacccct gcccgattgt
      541 caatcgatgc catcgccgct cagctgttgc gcgatcaata cttgctgacc gccctggagc
      601 tgcacaccga gctgttggag agcggccgcg agctaccacg actgcgcgat tacttctcca
      661 atcctggcaa cttcgagagg cagagtggga cccccccagg gatgggggcg cccgggatcc
      721 ctggcgcctc catcgtcgga ggcgctggag gtcgggaacc gagtacgacg tcgggcggag
      781 gacagctcaa tcgagctggg agcattagta ctcttgactc attagacttt gcaagatatt
      841 cagatgatgg taacagggaa acagatgaaa gagtggcggt cctggagttt gaactacgga
      901 aagccaagga gaccattcag gccctccgag ccaacctaac aaaggctgca gaacatgaag
      961 ttcctttaca ggaacgaaaa aattataaat caagtcctga aattcaggag ccaatcaaac
     1021 ctcttgaaaa gagagctctc aacttcctag tcaatgagtt tttgttaaag aataactaca
     1081 agcttacatc aataaccttt tcagatgaaa atgatgatca ggattttgaa ttatgggatg
     1141 atgtaggatt aaacattccc aaacccccag acttgttaca actttaccga gactttggaa
     1201 atcatcaagt gactgggaaa gatcttgtgg atgtggccag tggagtagat gaagatgaat
     1261 tagaggctct tacaccaatt ttaggcaacg tccctccaac ccttgatact cccctgccta
     1321 tagagaacac cttgctagta cagaaattag aagataaaat tagtttatta aataatgaaa
     1381 aatggtcatt gatggagcaa atcagaaggc ttgaaagtga gatggacatc ctcaaagctg
     1441 aacactttgc caccccagca gttggtgatt ctgttcagcc ttccttggtt tggtcttccc
     1501 aaaaggattc tgaagacaat agacaaagcc cagctgtaaa tagttcagac caggaaaaaa
     1561 ccaaggatgt tcatcttgaa ataccagatg cagctgattc ctttattcct aaagagaatt
     1621 cgtcaggttc tttccccagg aaggaaagag aagagctgcc accttcttct gtatcaaata
     1681 aaaccacgct ccatttcgat cagcccaata ggaaattgtc acctgctttc caccaagcac
     1741 tactctcttt ttgtcgaatg tcagcagata gtcggttagg atcagaggtg tctaggattg
     1801 cagacagtga aaaaagtgtt atgttaatgc tgggacgctg cctgccacac attgttccta
     1861 atgtgctgtt ggcaaaaaga gaggagttga ttcctctcat attgtgtaca gcatgcctgc
     1921 accctgaacc taaagaaaga gaccagctcc tccatatcct cttcaacctg atcaagaggc
     1981 cagatgatga gcaaaggcaa atgatactga caggatgtgt ggcatttgca cgtcatgttg
     2041 gaccaacacg tgtggaggct gaacttttac ctcagtgttg ggaacagatt aatcacaaat
     2101 atccagaaag acgactgctc gtggcagagt cctgtggagc attggcacct taccttccta
     2161 aagaaatccg tagttccctg gttctttcaa tgttgcaaca gatgttaatg gaagataagg
     2221 ctgatttggt aagagaagct gtgattaaaa gcctgggtat cattatgggc tacattgatg
     2281 atcctgacaa atatcaacag ggctttgaat tgttgctctc tgccctgggt gatccctcag
     2341 aaagagttgt tagtgcaaca caccaagtat ttttaccagc ctatgctgcc tggacaactg
     2401 aacttggaaa cttacagtct catcttatac ctacactact gaacaagatt gaaaagcttc
     2461 tcagggaagg agagcacggg ctggacgaac acaagctcca catgtatctt tctgccttgc
     2521 agtccttgat cccatctctc tttgcattag tgctacagaa cgcacctttc tccagcaaag
     2581 ccaagctgca tggtgaagta ccacatattg aagtgactag gttccctcgg cctatgtcac
     2641 ctctgcaaga tgtgtctact attattggaa gtcgtgagca attggcagtg ctactacaac
     2701 tttatgatta ccaactggaa catgaaggca caacaggctg ggagagttta ctctgggttg
     2761 tcaatcaatt gttgccacag cttatagaaa tagtgggcaa aattaatgta acctcaactg
     2821 cctgtgtcca tgaattctcc agatttttct ggcgtctttg ccggacattt ggcaaaattt
     2881 ttacaaacac taaggtaaaa ccccagttcc aagagatttt aagactctct gaagaaaata
     2941 ttgattcctc agcaggaaat ggggtcctca ctaaagctac tgtccccatt tatgcaacag
     3001 gagtcctcac gtgttacatt caggaagagg accgaaagct gttagttggc ttcttggaag
     3061 atgtgatgac actgctttca ctgtctcatg ctcctcttga cagcctgaag gcttcttttg
     3121 tggaacttgg tgcaaacccg gcctatcatg agctgctgct aactgttctg tggtatggtg
     3181 ttgttcatac ttctgcactt gtcaggtgta ctgctgctag gatgtttgag ctgactcttc
     3241 gaggcatgag tgaagcatta gttgacaagc gggttgctcc ggcccttgtt accttgtccg
     3301 gtgatcctga attctctgtc aggattgcta caatcccagc atttggcact attatggaaa
     3361 cagttattca gagagagttg ctagaaagag tgaagatgca gttggcttct ttcctggaag
     3421 accctcagta ccaagaccag cattctttgc atacagaggt catccgaaca tttggcagag
     3481 tcgggcctaa tgcagaaccc cggttccgag atgagtttgt tataccacat ttacataaat
     3541 tagccttggt gaacaactta caaattgtag attcgaaaaa actggacatt gcgactcatc
     3601 tttttgaagc ctacagtgca ctctcctgtt gtttcatttc agaggattta atggtaaatc
     3661 acttcttacc tggcctcaga tgtttacgga ctgacatgga acatctgtct ccagaacatg
     3721 aggttatttt aagttccatg ataaaagaat gtgaacaaaa agtagaaaac aagactgtcc
     3781 aagagcctcc aggctcaatg tcaattgctg caagtttagt gagtgaagac acaaagacca
     3841 agtttttgaa caaaatgggc cagttgacaa catcaggtgc catgctggcc aatgtgtttc
     3901 agagaaagaa gtagaagcgg gaggcccgcc ccggtggaca ctaagatgga cctcaagtag
     3961 actgctcctt gtacttgaag cgcttacctt ttgatttcct gactttatgt tcttgtgtta
     4021 taatgttatc ctaacctcca aagatatttg cactgctttt aattattgct gtgtatctat
     4081 ttctttgggt attataactg tggtaataga aacttgattt aatggtctgt accaagtccc
     4141 tattctatgt tcttattttt gagaataact tttatatata atatatatat gtatagtgaa
     4201 gaggggtttt tttgcttttg tttttttaat ttttattttt ggatgggata ttcacaaata
     4261 tctgtattat actctaagct attacaatgg tacttaaaat aatgtaaatt tgaagtcatt
     4321 gttataaagt aataaaagtg gaaattactt aagtatttaa attatgaaag aataatgcag
     4381 actttttatt atttcttaac tgactagaaa gagccaccag cattactctg tgccttttgg
     4441 acttgagttt gtatgttctg taggaactac atgcattcct ttcacacagt atttcaggct
     4501 gctgtggtga atttgaatgg cagatcctac agtcaataga taatgatgag acttacaaca
     4561 tttcacatct ctcttgagaa tcctttaagt gctgtttagc ctcccaacac atagatgcat
     4621 aggatggagt tccctgagga aaacagcact tgagcatggt gaggagtagc cagggtgaat
     4681 ttcacaacat ttgtactaga tttagatgct caagaataaa tgtactgaga agagttaata
     4741 attgtttatt cccaaattga aatacacaag aaaatataat ttaagtctga aatttaacgc
     4801 ctacttccta taacacattt taggatgctt tctgatgatt taaactttgc agtttacttt
     4861 ttcatcctgt atgagaagta ctaagtaagt ttaggacatt tggggttcct ttttcccttc
     4921 taaagtgaaa gtgatgttag ttaagttatt attggtttgt tgccacctgg taccttaaac
     4981 tcggtggcta ttcccattgc tgtgttttat ttgtatagtc ttacgttgat agacagcccc
     5041 actggaattg accaattgtc tacacagcga cacagagtgt tgtgtatgaa acggagtaac
     5101 tggcttaagg ggttaatgtg aggccttaca cagttgacgc atatacatga ttctcatatt
     5161 tattgtgtaa attggcttta atacacttgg atcacattca cttcctgtgg aaaagctagc
     5221 tttcccatgc agtcaaagct tataaagtta tttgccttag gcaaagccat tcatttcttt
     5281 tacctatagt gaaattattg aatagtagtt tttctgaact gttggattct aggcattcct
     5341 gagaaattga aagtggctac ctttcatgtc aaaatgttga tctgttataa ataaatgttt
     5401 tgcatacttg tt
//
