LOCUS       NM_180588               1686 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus receptor accessory protein 4 (Reep4), mRNA.
ACCESSION   NM_180588
VERSION     NM_180588.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1686)
  AUTHORS   Saito,H., Kubota,M., Roberts,R.W., Chi,Q. and Matsunami,H.
  TITLE     RTP family members induce functional expression of mammalian
            odorant receptors
  JOURNAL   Cell 119 (5), 679-691 (2004)
   PUBMED   15550249
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC122268.5, BC033929.1 and BF464286.1.
            
            On Mar 17, 2011 this sequence version replaced NM_180588.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK012301.1, BC033929.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-372               AC122268.5         169574-169945
            373-1667            BC033929.1         1-1295
            1668-1686           BF464286.1         1-19                c
FEATURES             Location/Qualifiers
     source          1..1686
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 36.32 cM"
     gene            1..1686
                     /gene="Reep4"
                     /gene_synonym="2700029E10Rik"
                     /note="receptor accessory protein 4"
                     /db_xref="GeneID:72549"
                     /db_xref="MGI:MGI:1919799"
     exon            1..488
                     /gene="Reep4"
                     /gene_synonym="2700029E10Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             457..1230
                     /gene="Reep4"
                     /gene_synonym="2700029E10Rik"
                     /codon_start=1
                     /product="receptor expression-enhancing protein 4"
                     /protein_id="NP_850919.1"
                     /db_xref="CCDS:CCDS27256.1"
                     /db_xref="GeneID:72549"
                     /db_xref="MGI:MGI:1919799"
                     /translation="MVSWMICRLVVLIFGMLYPAYASYKAVKSKNIREYVRWMMYWIV
                     FAIFMAAETFTDIFISWFPFYYEFKMAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKE
                     IDACIVQAKERSYETMLSFGKRSLNIAASAAVQAATKSQGALAGRLRSFSMQDLRSIP
                     DTPVPTYQDPLYLEDQVPRRRPPIGYRPGGLQGSDTEDECWSDNEIVPQPPVRPREKP
                     LGRSQSLRVVKRKPLTREGTSRSLKVRTRKKAMPSDMDS"
     exon            489..561
                     /gene="Reep4"
                     /gene_synonym="2700029E10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            562..638
                     /gene="Reep4"
                     /gene_synonym="2700029E10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            639..759
                     /gene="Reep4"
                     /gene_synonym="2700029E10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            760..873
                     /gene="Reep4"
                     /gene_synonym="2700029E10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            874..1009
                     /gene="Reep4"
                     /gene_synonym="2700029E10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1010..1164
                     /gene="Reep4"
                     /gene_synonym="2700029E10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1165..1670
                     /gene="Reep4"
                     /gene_synonym="2700029E10Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1638..1643
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Reep4"
                     /gene_synonym="2700029E10Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1670
                     /gene="Reep4"
                     /gene_synonym="2700029E10Rik"
                     /note="major polyA site"
ORIGIN      
        1 cgctggggtt gggcaggatc tggttccgtg caacttttaa gtgagttaca aactccgccc
       61 cgagaccggt gcaggtggtc gggcgctctg ccacccgggc ggcaggtgag agctgaggtc
      121 cggcctgcca cccggacccg agaccagcag cgccgccctc gacgggggac gaacggttct
      181 ccgcggcagg aattgtggga ctgagccgcc aggattcggc gaggcggagg gacgcgccct
      241 cccgcctcga tcacaaggcg gcttcctctg ctaggccctc ggtcccctgg ttccgggttc
      301 tcctggctcc ccgcactgcg gggtcgaagt caggggtggt gatctccgcc tacaccgagg
      361 gagaggtgta ctgcagcacc actcaccccc ttgtcccagc tcctgagtga gcgtccctcc
      421 gcttgtctct tggggtcatc cccctaggct gtcaggatgg tgtcctggat gatctgtcgc
      481 ctggtagtgc tcatatttgg catgctgtat cctgcgtatg cttcctacaa ggccgtgaag
      541 agcaagaaca ttcgagaata tgtacggtgg atgatgtatt ggattgtctt tgcgatcttc
      601 atggcagcag aaaccttcac agacatcttc atttcctggt tcccgtttta ttacgagttc
      661 aagatggctt ttgtgctgtg gctgctctca ccttacacca agggggccag cctgctttac
      721 cgaaagtttg tccacccatc cctatcccgc catgagaagg agatcgacgc gtgtatcgtg
      781 caggcaaagg agcgcagcta tgaaaccatg ctcagttttg ggaagcggag cctcaacatc
      841 gctgcctcag ctgctgtgca ggctgctacc aagagtcaag gcgctctagc tggaaggctg
      901 cggagtttct ctatgcaaga cctgcgctct atccctgaca cccctgtccc cacctaccaa
      961 gatcccctct acctggaaga ccaggtaccc cgacgtagac cccctattgg ataccggcca
     1021 ggcggcctgc agggcagtga cacagaggat gagtgttggt cagacaatga gatcgtcccc
     1081 cagccacctg ttcggccccg agagaagcct ctaggccgca gccagagcct tcgggtggtc
     1141 aagaggaagc cattgactcg agagggcacc tcacgctccc tgaaggtccg aacccggaaa
     1201 aaggccatgc cctcagacat ggacagctag agtctgcaga ttgaggccac cttacctctg
     1261 gagccagcag gggacctttc gctgctacac cagctaccgg ggttctgctc cgtctggctt
     1321 gtgcctaaat ggcacatggc gtggtaccct gcacagggag acattcacta taccaaagca
     1381 gcccaggcct ggggcctatt tattgccttc ctctgccttt tactttctca gacacgggac
     1441 cagagcccca ccagtcccta ccgacgaaac caaaagtcca accagctgtg ttcattcctt
     1501 cttgtccttc aaaatacttg acagcctttt ccaaggcctg gtgtgtgtgt gtgtgtgtgt
     1561 gtgtgtgtgt gtttacgtac actagctgca tgtttcgtgt tggtgagtga ggtcaggctt
     1621 atgaatattt ttatataaat aaataccaaa cagtgtttgg cctctcctaa aaaaaaaaaa
     1681 aaaaaa
//
