LOCUS       NM_178593               2670 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus RCSD domain containing 1 (Rcsd1), transcript variant
            1, mRNA.
ACCESSION   NM_178593
VERSION     NM_178593.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2670)
  AUTHORS   Weiss,A.C., Blank,E., Bohnenpoll,T., Kleppa,M.J., Rivera-Reyes,R.,
            Taketo,M.M., Trowe,M.O. and Kispert,A.
  TITLE     Permissive ureter specification by TBX18-mediated repression of
            metanephric gene expression
  JOURNAL   Development 150 (6) (2023)
   PUBMED   36960826
REFERENCE   2  (bases 1 to 2670)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2670)
  AUTHORS   Hempel,A., Kuhl,S.J., Rothe,M., Rao Tata,P., Sirbu,I.O.,
            Vainio,S.J. and Kuhl,M.
  TITLE     The CapZ interacting protein Rcsd1 is required for cardiogenesis
            downstream of Wnt11a in Xenopus laevis
  JOURNAL   Dev Biol 424 (1), 28-39 (2017)
   PUBMED   28237811
REFERENCE   4  (bases 1 to 2670)
  AUTHORS   Terami,H., Hidaka,K., Shirai,M., Narumiya,H., Kuroyanagi,T.,
            Arai,Y., Aburatani,H. and Morisaki,T.
  TITLE     Efficient capture of cardiogenesis-associated genes expressed in ES
            cells
  JOURNAL   Biochem Biophys Res Commun 355 (1), 47-53 (2007)
   PUBMED   17286962
REFERENCE   5  (bases 1 to 2670)
  AUTHORS   Eyers,C.E., McNeill,H., Knebel,A., Morrice,N., Arthur,S.J.,
            Cuenda,A. and Cohen,P.
  TITLE     The phosphorylation of CapZ-interacting protein (CapZIP) by
            stress-activated protein kinases triggers its dissociation from
            CapZ
  JOURNAL   Biochem J 389 (Pt 1), 127-135 (2005)
   PUBMED   15850461
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY230131.1, AK133961.1 and AK168816.1.
            
            On Jan 11, 2006 this sequence version replaced NM_178593.2.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer protein (isoform a).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK171914.1, AK133961.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849383 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-306               BY230131.1         2-307
            307-2229            AK133961.1         262-2184
            2230-2670           AK168816.1         2111-2551
FEATURES             Location/Qualifiers
     source          1..2670
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 72.99 cM"
     gene            1..2670
                     /gene="Rcsd1"
                     /gene_synonym="A430105K13Rik; CapZIP; Gm19627"
                     /note="RCSD domain containing 1"
                     /db_xref="GeneID:226594"
                     /db_xref="MGI:MGI:2676394"
     exon            1..204
                     /gene="Rcsd1"
                     /gene_synonym="A430105K13Rik; CapZIP; Gm19627"
                     /inference="alignment:Splign:2.1.0"
     exon            205..306
                     /gene="Rcsd1"
                     /gene_synonym="A430105K13Rik; CapZIP; Gm19627"
                     /inference="alignment:Splign:2.1.0"
     exon            307..396
                     /gene="Rcsd1"
                     /gene_synonym="A430105K13Rik; CapZIP; Gm19627"
                     /inference="alignment:Splign:2.1.0"
     exon            397..468
                     /gene="Rcsd1"
                     /gene_synonym="A430105K13Rik; CapZIP; Gm19627"
                     /inference="alignment:Splign:2.1.0"
     exon            469..672
                     /gene="Rcsd1"
                     /gene_synonym="A430105K13Rik; CapZIP; Gm19627"
                     /inference="alignment:Splign:2.1.0"
     exon            673..1404
                     /gene="Rcsd1"
                     /gene_synonym="A430105K13Rik; CapZIP; Gm19627"
                     /inference="alignment:Splign:2.1.0"
     exon            1405..2670
                     /gene="Rcsd1"
                     /gene_synonym="A430105K13Rik; CapZIP; Gm19627"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2653..2658
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rcsd1"
                     /gene_synonym="A430105K13Rik; CapZIP; Gm19627"
                     /note="hexamer: AATAAA"
     polyA_site      2670
                     /gene="Rcsd1"
                     /gene_synonym="A430105K13Rik; CapZIP; Gm19627"
                     /note="major polyA site"
ORIGIN      
        1 gttctctggc gcagggcccc cagctggggc agtcccgcag ccgagtgcag ccaggcgcgc
       61 gccgccgccc actcgccctg tgcccgctac agccccgaaa gtgacccggg ctgggagccg
      121 aggggacagc ggggatcgtg ggctcttaac ccgagagagc gggcgtatcc gcagccggag
      181 gaagactacc tggaggacat ggaggaaaga ccctcagaga ccaactccaa tgttgacagc
      241 tcagcgcagc cttcagtggc ccagctggct gggcgctttc gggagcatgc agctgtggcc
      301 agggagacac cagccagtaa gccaacaaga aggaaaccac cttgctccct ccccctgttt
      361 ccccccaagg tagagctggg ccagaacggt gaggagaaat caccatccgg cgccagccac
      421 ccacctaaaa tcaaggtgaa gagctcaccc ctgatcgaga agcttcaggc caacttagcc
      481 tttgacccgg cagctcttct gcctggggct tcacccaaaa gtcccggact caaggccatc
      541 gtatcaccat ttcacagtcc cccttccaca cccagtagcc ccggcatccg atcccaccca
      601 agtgaggcag aagaggtgcc tgtgagcttt gaccagcccc cggaaggaac tcacctgccc
      661 tcttacaata aggtgcggac tagaggctca ataaaaagac gtcctccctc gcggcgattc
      721 cgaaggtctc agtcggactg tggggatttt agagattaca gggctgtgga gccatctcag
      781 gaaaacggtg ccagggaaga gaatggggat gacgtgtttg ctagcaagag caaggacccc
      841 gggtcccctc aactcaacca ggaggctatg gcagacgggg tggagggaac tccgtggtct
      901 gcagaaaagc cacggagaag gaacacgtgt aacagcacag agaagccaga ggagctggtc
      961 aggaccccag aggaggcgaa tgctggagag aaggttggac agaatccaga cacagctagt
     1021 cagggtcatc cagaggtcca ggcgccatcg caaaccggca gcccagaggc tgagaatggg
     1081 tgcggaagcc cacgggaaga gacaaccccg ggagagcata cagacactgg gaaggccact
     1141 gaagggacag cctctgagga gagggtagca gatgaagata ggctcggaca gaaaagccca
     1201 gacgcaaata tgcctgagga ggagggagtg gtcagggaga aagccccaca aacctcttct
     1261 ggaaaagcag aaggtactac tatcgcagag ccggatacaa agcaaaagga ggaggcgcct
     1321 ctggagccaa gctgtagccc aggggctgac catgctgcgg gagagatcac cagtgagatc
     1381 cagaatgaga aagcagtctc catggatgac atccccatcg aggatacccg aatgtgatga
     1441 agggctcagg gtaccagtga tggggccact ggagacatct ccttggaaac agcagcagta
     1501 acagcagcag cagcagtgca tgaagccact gcagaagcag aatacaccga gcatctggag
     1561 acagcccagg atgcagggtg gatggtcccc cgtaggctac accaaccgtc tcctcactgg
     1621 agatgagagc tgaggacagt agagttttat caacttgagt ttgtgtcacc tgacgcacga
     1681 ctcaaagtta aatatattta aagcaatttg gtgtggtgtc tgctccacga ccttcctgtt
     1741 gatccccaag tcttcctgca gccaacctcc caactaggct cttgttgaac ttgtgtaaag
     1801 ttacggcctt tttctatcgt tctaatgttt ttatggttct cagacgtaac ttacaactaa
     1861 ttttaggtag ataaagaagg tagtcttgtg gagaataaga ttccctaagt taccgagacc
     1921 tgaaaacata ccaaagccct cacgacgacc gttctgcttg ctccagatgg gaatcagctg
     1981 accagtttca aaaactcaaa gagatattta ttaaaacatt taaagtcgtg ttcctgcctg
     2041 ctccaaggac aggaactttt ccctgtccca cacagcctgg ctgatgagaa caaggggagg
     2101 tgattgatcc atctcatccc atccaaagga gaggcaggat tcatcccctc cacccctcaa
     2161 ggtgccacca tatgcctgcc ttgctctgag catgggttgt actctcctgg aaggttacac
     2221 ttgaacagga aactggccgg cctctgggag ggacgttcag tgtccgcagt acagcttacc
     2281 ttctgagagc gtctctcttc gcttctctat gaagttttgt ttgtttgctt ttgtttttgt
     2341 tttttcaaat ctcaccatgt agacttatat gtagcccagg ctggttttga attagtgatc
     2401 cccctgcctc tgcctctaga ttgtgggtat gcatcactgt gcctggttct cagtaagcat
     2461 ttctcaactc caagttcttc tcccagactc aggaggcatg agttagggtc tccagcctgt
     2521 tttcatcagg aactcctgct cagtatcctg tccggggata aaacagggtt tgcaggaata
     2581 tgggtcggtc tgatatccat tcctctgatc accctcccct ccatgaactc ctgctgaaga
     2641 aatgttaaca taaataaatg atgaatcttc
//
