LOCUS       NM_019711               5207 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Mus musculus RNA binding motif, single stranded interacting protein
            2 (Rbms2), transcript variant 1, mRNA.
ACCESSION   NM_019711
VERSION     NM_019711.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5207)
  AUTHORS   Li,J., Niu,J., Ou,S., Ye,Z.Y., Liu,D.Q., Wang,F.C., Su,Y.P. and
            Wang,J.P.
  TITLE     Effects of SCR-3 on the immunosuppression accompanied with the
            systemic inflammatory response syndrome
  JOURNAL   Mol Cell Biochem 364 (1-2), 29-37 (2012)
   PUBMED   22198336
  REMARK    GeneRIF: SRC-3 protein is a significant regulator of infection and
            inflammation, and SRC-3 protein play an essential role in the
            development of immunosuppression accompanied with SIRS(systemic
            inflammatory response syndrome).
REFERENCE   2  (bases 1 to 5207)
  AUTHORS   Combes,A.N., Lesieur,E., Harley,V.R., Sinclair,A.H., Little,M.H.,
            Wilhelm,D. and Koopman,P.
  TITLE     Three-dimensional visualization of testis cord morphogenesis, a
            novel tubulogenic mechanism in development
  JOURNAL   Dev Dyn 238 (5), 1033-1041 (2009)
   PUBMED   19334288
REFERENCE   3  (bases 1 to 5207)
  AUTHORS   McKee,A.E., Minet,E., Stern,C., Riahi,S., Stiles,C.D. and
            Silver,P.A.
  TITLE     A genome-wide in situ hybridization map of RNA-binding proteins
            reveals anatomically restricted expression in the developing mouse
            brain
  JOURNAL   BMC Dev Biol 5, 14 (2005)
   PUBMED   16033648
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 5207)
  AUTHORS   Fujimoto,M., Matsumoto,K.I., Iguchi-Ariga,S.M. and Ariga,H.
  TITLE     Structures and comparison of genomic and complementary DNAs of
            mouse MSSP, a c-Myc binding protein
  JOURNAL   Int J Oncol 16 (2), 245-251 (2000)
   PUBMED   10639566
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CX564775.1, AK054482.1 and AC135859.4.
            
            [WARNING] On Apr 12, 2024 this sequence was replaced by
            NM_019711.3.
            
            On Jan 13, 2006 this sequence version replaced NM_019711.1.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (a).
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR9219380.42781.1,
                                           SRR17784646.436538.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-543               CX564775.1         22-564
            544-1401            AK054482.1         457-1314
            1402-5207           AC135859.4         174201-178006
FEATURES             Location/Qualifiers
     source          1..5207
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 76.41 cM"
     gene            1..5207
                     /gene="Rbms2"
                     /gene_synonym="2610315E04Rik; Scr3"
                     /note="RNA binding motif, single stranded interacting
                     protein 2"
                     /db_xref="GeneID:56516"
                     /db_xref="MGI:MGI:1861776"
     exon            1..219
                     /gene="Rbms2"
                     /gene_synonym="2610315E04Rik; Scr3"
                     /inference="alignment:Splign:2.1.0"
     CDS             154..1305
                     /gene="Rbms2"
                     /gene_synonym="2610315E04Rik; Scr3"
                     /note="isoform a is encoded by transcript variant 1"
                     /codon_start=1
                     /product="RNA-binding motif, single-stranded-interacting
                     protein 2 isoform a"
                     /protein_id="NP_062685.2"
                     /db_xref="CCDS:CCDS24261.1"
                     /db_xref="GeneID:56516"
                     /db_xref="MGI:MGI:1861776"
                     /translation="MLLSVTSRPGISTFGYNKNNKKLYVAQQMAPPSPRNSTPNSSGG
                     GGGGSGGNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYG
                     FVDFDSPSSAQKAVTALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELEGMLKPF
                     GQVISTRILRDTSGASRGVGFARMESTEKCEAIITHFNGKYIKTPPGVAAPSDPLLCK
                     FADGGPKKRQSQGRYVQNGRAWPRNGDMGGMALTYDPTAALQNGFYAAPYSIAHSRML
                     AQSALAPYLPSPVSSYQGSVLTPGMDHPLSLQPASMMGPLTQQLGHLSLNSLGTFMPA
                     AAAMHGAYISQYPAVPSSSVSAEESNGQQNQLAVEPPSDHGVYPFQFSK"
     exon            220..392
                     /gene="Rbms2"
                     /gene_synonym="2610315E04Rik; Scr3"
                     /inference="alignment:Splign:2.1.0"
     exon            393..451
                     /gene="Rbms2"
                     /gene_synonym="2610315E04Rik; Scr3"
                     /inference="alignment:Splign:2.1.0"
     exon            452..543
                     /gene="Rbms2"
                     /gene_synonym="2610315E04Rik; Scr3"
                     /inference="alignment:Splign:2.1.0"
     exon            544..701
                     /gene="Rbms2"
                     /gene_synonym="2610315E04Rik; Scr3"
                     /inference="alignment:Splign:2.1.0"
     exon            702..781
                     /gene="Rbms2"
                     /gene_synonym="2610315E04Rik; Scr3"
                     /inference="alignment:Splign:2.1.0"
     exon            782..891
                     /gene="Rbms2"
                     /gene_synonym="2610315E04Rik; Scr3"
                     /inference="alignment:Splign:2.1.0"
     exon            892..938
                     /gene="Rbms2"
                     /gene_synonym="2610315E04Rik; Scr3"
                     /inference="alignment:Splign:2.1.0"
     exon            939..1032
                     /gene="Rbms2"
                     /gene_synonym="2610315E04Rik; Scr3"
                     /inference="alignment:Splign:2.1.0"
     exon            1033..1143
                     /gene="Rbms2"
                     /gene_synonym="2610315E04Rik; Scr3"
                     /inference="alignment:Splign:2.1.0"
     exon            1144..1224
                     /gene="Rbms2"
                     /gene_synonym="2610315E04Rik; Scr3"
                     /inference="alignment:Splign:2.1.0"
     exon            1225..1309
                     /gene="Rbms2"
                     /gene_synonym="2610315E04Rik; Scr3"
                     /inference="alignment:Splign:2.1.0"
     exon            1310..5207
                     /gene="Rbms2"
                     /gene_synonym="2610315E04Rik; Scr3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctttctcctc cccctccctt ctcccttccc tccctctttc cctcccttcc tctctccctc
       61 tcctttcccc ctcccctcct ccctccctct ttctccctcc ctttccttca ctctcttctt
      121 tctctctctc agctccgtaa cagtaaagaa aaaatgctgc tatcagtgac ttccaggcct
      181 gggatttcga cttttggcta taacaagaac aacaagaagc tatatgtggc tcagcaaatg
      241 gcacctccaa gtccaaggaa tagcaccccc aacagcagcg gcggaggcgg cggcgggagt
      301 ggtgggaacg accagctgag caaaaccaac ctgtatatcc gaggactgca gccaggcacc
      361 actgaccagg accttgtcaa gctctgtcag ccgtatggca agattgtctc cactaaggcc
      421 atcctggaca agaccacaaa caagtgcaaa ggctatggct ttgtggactt cgacagtccg
      481 tcatcagcac agaaagctgt aactgcactg aaagccagtg gtgtgcaggc acaaatggca
      541 aagcaacagg agcaagaccc tacaaactta tacatctcaa acctccctct gtcaatggac
      601 gagcaggaac tggaggggat gctgaagccc tttggccagg tcatctctac tcggatcctt
      661 cgagacacta gtggggccag cagaggggtc ggctttgcaa ggatggagtc aacagagaag
      721 tgtgaagcca tcatcaccca ctttaatgga aagtatataa agacaccccc tggagtagca
      781 gcaccttctg accctttgct ttgcaaattt gctgacggtg ggccaaagaa acgacagagc
      841 caaggaagat acgtgcaaaa tggacgggcc tggccaagga acggagacat gggcggtatg
      901 gccttgacct atgaccccac tgctgccctt cagaatgggt tctacgcagc tccttacagt
      961 atcgcccaca gcaggatgct tgctcaatct gcgctagccc cgtatcttcc atctcctgtg
     1021 tcttcctatc agggctcagt tctgacacca gggatggacc accccctctc tctccagcct
     1081 gcctccatga tgggacctct tacccagcaa ctgggtcacc tgtcactcaa cagtctgggc
     1141 acgttcatgc cggcagctgc tgctatgcat ggggcttaca tctcccagta cccagctgtg
     1201 ccttcttcca gtgtttctgc tgaggagagc aatggccagc agaatcaact ggcagtggag
     1261 cccccctcag accacggggt ctatcctttc cagttcagca aataatgagg tccagacctg
     1321 gggagagaag cctatgcagt cctccttggg ctccttcctg tggctgatgg aacctgagga
     1381 atcacgttgg tttttttttt tgaatgtgct acattcaaga tcaaaaagac ttttttttct
     1441 tttgcaaaag aagtttcttg ctttgtattt aattgcagcg aacctttctc ctaccccaaa
     1501 gacaccagtt gaggtgcttc tcatcttcga gaggtttggg tatgttgggc ttttaaaatg
     1561 gtttaagaac aatcgcagtg ctgtgaagtc agtgaagggg cgctgcttgc caggttcagt
     1621 tagggactat tttcaatgtg tgttttagat atgcaggctt aaaacttttg ttttgcaaag
     1681 ctctcaacac acactttgca cacacccacc cacctccctc ccacgcactg tttaaggcag
     1741 ggtctcacag tgcagtcctg gctggctgac aatgtagacc aggctggctt tgaactcagc
     1801 gatccttccc actctgtctg agtgcaccgc catgcctagc tagttgtttt tttttttttg
     1861 gttttttttt tttcaagaca gggtttctct gtgtagccct ggctgtcctg gcgctcactt
     1921 tgtagaccaa gctagcctcg aacttagaaa tccacctgcc tctgcctccc aagtgctggg
     1981 attaaaggcg tgcgccacca ccgcccggct agttgttttt taaaacttct ccacaatggt
     2041 ctttttttct tttccattta gcttagcctg cctactttgc ctttttacaa tttttaattt
     2101 tatgaatttg atttaaattt catgtggaat tgggggaagg gagagcaacg cacaggtaga
     2161 gaagtgtggc agtagaggtt gctttccctc tgccctcctg gcctaggagg ggttagactt
     2221 tgacttcagg aagcagacat gtgacaacca tgcagccttt ggaaaccacc ttcaaccaac
     2281 tctggtggca agtgccactg agaagtggca tccagcttca gcatcctgga tacctgctct
     2341 gcctcctgga gggtcttggg tcttcatcct gccccaggtc tcacagcccc tgcccctgct
     2401 gagcaagttc tgccttccac tttaccagga ggttgttttg tccccgagag gctgctgtct
     2461 tgtccatcat catccttgat taccaagcct ggggagtatc atgtgtgctg gtcctgaaca
     2521 cctgacagaa cctggcccca ctcctccacc ccttattccc tggcagttat ttggtgtaga
     2581 ctaaacccca gtccagcctt ggacatggag cctgttagtt catgtacttg gccagcagtg
     2641 acatctgtga ctttgcctcc tggaggatct tttctgcctg ggttctcaca gcctctcatc
     2701 ccagctgcac atggctgtac tcaagtggta cttggctgaa tcacttaatt cagcaggagc
     2761 catcttattt agcagggctc acccttggtt gtatgtacat gccaagtgca cacagtttga
     2821 agggatgaaa gcaagaactg ttgtgtatac tgtgcatgct tgagaatgga ctgagctttc
     2881 tctatgcagc atacccagcc cagccctggt gtttggaccc cttccccagg gaaccagacc
     2941 accagaaata attttccttc ttgtggaagg acgacggggt gctaggatag aaaaaggcaa
     3001 gactcacagc tccctggcca ctcaaaggtc aggagggact tgtaaacatg cctgccgtta
     3061 actattccct tctgcaagac tttcagcaca aaatgtgact tgttacatca catcccttca
     3121 cgtcataagt acacctccag tagacaaagc aatggagatg gggaagtgtg tccagaggtc
     3181 agtgtgaaag aggaagggca gggcatggtg atggtgagaa actggctcag cagctgtgca
     3241 cactacagaa ttgggaatcc tggcctgact gtgctgctgt gcgttctaga ctgaggaagg
     3301 ggctgaggac aatggacagc ataaagtaca aaatgaccag ttttctcatt ggtgcttcca
     3361 acatcaggaa ggtcataccc agttatcgac ctctagccct ctagcactca gtgacagact
     3421 cagagctctg tcctgtggaa accctgctga cagtcttgct gccactgctg ctccttcact
     3481 gcctattaaa aattgttcct ttttctgtag ttctaaagca atttgaataa ctgacagttt
     3541 taaaatttga aattaccttt ttaggttttt cttttgagta tactggttag ggttctagtg
     3601 tttctggttg aacaggtgtg agcatgggaa atgagggcaa cctgtaattt tgtttttata
     3661 gtggttaatg gcactcactg tgtaatttct gcttagtgat ttccatccac tcttttcctc
     3721 attagctcat tactcagaaa ggtagcgact gaagacagga agtagtatgc aagccatgag
     3781 ggatgagttg taagcctcct ctccatcatc ctgcccaagg ctcctaacag tctcctgagt
     3841 cctgtttgca tggaggccag atagatggct ctgcactcta tatctcacct gtactcattt
     3901 tagtacattg tggttttgct tccaatcaat cagagtggac tagagctcac acctgacctc
     3961 gtgtgactct tcactaggct ccaggcctat cccatctcat tgggtcagac tgtagatgga
     4021 ctggactttt ggagacaggt cctgctatta cttaggaata tgtgggaaca atgataggga
     4081 ccaagcttgt gaagcaaaac ggctttggaa agggcaagtg ctcaataata aaaaatgggg
     4141 tggaagtgaa gcgttatttg ctgagggttt cggaaggact agtttgtttt tgtccctggc
     4201 ccttccggtc aagtgggcac ctcccatttt gtcgccaaga gcaatacagt tgagtaggtg
     4261 gtagacccaa actcacccag ccatttctag acctgaattc agaggataag gtgagtctag
     4321 aggtatatac aaccaatgct tgttagacca attcttacca attcggagca agccggtggc
     4381 tctacttctg ggtaacctgc ctcttaaaag tgcctttgat cccagtagta gattcagggt
     4441 ctacaggagc cttccctcag cagctaaaac caatttgtct cctctactct ttgctgcacc
     4501 tcccggaggt ggtctccatg tggcagtgat gccctcatca cccttgtgac caccgctctg
     4561 aatgttcaaa ataagcattt cctgtccaag caaatcccta aactccctcg tcctcattac
     4621 tcaactacct cagtctgaca actcaaggca cacaagcacc tacttgcctc ccaccatcct
     4681 ttactgccct tgtctttgtg gggttggaac aaatgcaaac tcctcagttc cacaacccaa
     4741 aactgctctt tctggatcgt cttctccagt gacgttggct ccctacaaga gcgaactctc
     4801 catatgggtc agtccctgta ggacaagcca gggactatgc tgtgcagtca aatgccaggt
     4861 ttggagcata gcttaagacc gcagagagta aggacttgag tggtggtggt gtgcagtttg
     4921 agagagctgg aatggacgtc tctgctcctg ccctctgggc gggtcgggtg atgacttcta
     4981 gatgcactcc ttaccctgga gggaagttaa tttatactta agatgcattt tgtacatttc
     5041 ccctttaccc agaaacctgt agtttcatac tcccatgtct atgccaacac tacctatcgc
     5101 tcactctccg tggctgactt ctggttccat ttccttcctg tgacttggaa gagctttact
     5161 tttgctcacg tgaacctttc ttttttaaat aaaacacaaa agcctcc
//
