LOCUS       NM_025776               2079 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus RNA binding motif protein 22 (Rbm22), mRNA.
ACCESSION   NM_025776 XM_619541 XM_901661 XM_915068 XM_994570 XM_994591
VERSION     NM_025776.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   3  (bases 1 to 2079)
  AUTHORS   Wiese,C.B., Ireland,S., Fleming,N.L., Yu,J., Valerius,M.T.,
            Georgas,K., Chiu,H.S., Brennan,J., Armstrong,J., Little,M.H.,
            McMahon,A.P. and Southard-Smith,E.M.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 2079)
  AUTHORS   Dequeant,M.L., Glynn,E., Gaudenz,K., Wahl,M., Chen,J., Mushegian,A.
            and Pourquie,O.
  TITLE     A complex oscillating network of signaling genes underlies the
            mouse segmentation clock
  JOURNAL   Science 314 (5805), 1595-1598 (2006)
   PUBMED   17095659
REFERENCE   5  (bases 1 to 2079)
  AUTHORS   McKee,A.E., Minet,E., Stern,C., Riahi,S., Stiles,C.D. and
            Silver,P.A.
  TITLE     A genome-wide in situ hybridization map of RNA-binding proteins
            reveals anatomically restricted expression in the developing mouse
            brain
  JOURNAL   BMC Dev Biol 5, 14 (2005)
   PUBMED   16033648
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK168919.1.
            
            On Apr 5, 2007 this sequence version replaced NM_025776.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK168919.1, AK018452.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2079              AK168919.1         2-2080
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="18"
                     /map="18 34.36 cM"
     gene            1..2079
                     /gene="Rbm22"
                     /gene_synonym="8430430L24Rik"
                     /note="RNA binding motif protein 22"
                     /db_xref="GeneID:66810"
                     /db_xref="MGI:MGI:1914060"
     exon            1..94
                     /gene="Rbm22"
                     /gene_synonym="8430430L24Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             41..1303
                     /gene="Rbm22"
                     /gene_synonym="8430430L24Rik"
                     /codon_start=1
                     /product="pre-mRNA-splicing factor RBM22"
                     /protein_id="NP_080052.1"
                     /db_xref="CCDS:CCDS29272.1"
                     /db_xref="GeneID:66810"
                     /db_xref="MGI:MGI:1914060"
                     /translation="MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKE
                     CKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLS
                     FKDDMPKSDVNKEYYTQNMEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRN
                     RPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRAS
                     TMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFAT
                     RQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGA
                     LPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPMGPPPP
                     FMRAPGPIHYPSQDPQRMGAHAGKHSSP"
     exon            95..148
                     /gene="Rbm22"
                     /gene_synonym="8430430L24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            149..178
                     /gene="Rbm22"
                     /gene_synonym="8430430L24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            179..311
                     /gene="Rbm22"
                     /gene_synonym="8430430L24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            312..412
                     /gene="Rbm22"
                     /gene_synonym="8430430L24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            413..585
                     /gene="Rbm22"
                     /gene_synonym="8430430L24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            586..786
                     /gene="Rbm22"
                     /gene_synonym="8430430L24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            787..951
                     /gene="Rbm22"
                     /gene_synonym="8430430L24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            952..1040
                     /gene="Rbm22"
                     /gene_synonym="8430430L24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1041..1172
                     /gene="Rbm22"
                     /gene_synonym="8430430L24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1173..2079
                     /gene="Rbm22"
                     /gene_synonym="8430430L24Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2052..2057
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rbm22"
                     /gene_synonym="8430430L24Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      2075
                     /gene="Rbm22"
                     /gene_synonym="8430430L24Rik"
                     /note="major polyA site"
ORIGIN      
        1 ctctcgagtc ggaagccgga gctgtcccgg gactcccgat atggcgactt ctctgggttc
       61 caacacctac aacaggcaga actgggagga cgcggacttc cccattctgt gtcagacgtg
      121 tcttggagaa aacccttata tacgaatgac caaagaaaaa tatggaaaag aatgcaaaat
      181 ctgtgccagg ccattcacag tgtttcgctg gtgccctggg gtccgcatgc gcttcaagaa
      241 gactgaagtg tgccaaacct gcagtaaatt gaagaatgtt tgtcagacct gcctgttaga
      301 ccttgaatat ggcctaccca tccaggttcg tgatgcagga ttatcattta aagatgacat
      361 gcctaagtca gatgtcaata aagaatatta cacccaaaat atggaaagag aaatttctaa
      421 ctctgatgga acacgaccag ttgggatgct aggaaaagca acatccacca gtgacatgct
      481 cctcaagttg gcccggacca caccctacta caaaaggaat cggccccaca tttgttcctt
      541 ttgggtgaaa ggagagtgta agagaggaga ggagtgccca tacagacatg agaagcctac
      601 cgacccagac gaccctcttg ctgatcagaa tatcaaagac cggtactatg gaatcaacga
      661 ccccgtggct gacaagcttc taaagcgggc ctcgaccatg ccccgcctgg acccaccgga
      721 ggataagacc attaccaccc tgtacgtcgg cggtctggga gacaccatca ccgaaacaga
      781 tctcagaaat catttctacc agtttggaga gatccgcacc atcactgttg tgcagaggca
      841 gcagtgtgcc ttcatccagt tcgccaccag gcaggctgcc gaggtagccg ctgagaagtc
      901 ctttaacaag ctgatcgtga atggccggag gctcaatgtc aagtggggaa gatcccaagc
      961 agccagaggc aaagaaaaag agaaggatgg aaccacagac tctgggatca agctagaacc
     1021 tgtgccagga ctgcctggag ctctgcctcc acctcctgca gcagaagagg aggcgtctgc
     1081 caactacttc aacctgcccc caagtggtcc tccagcagtg gtgaacattg ccctgccccc
     1141 accccctggg atcgccccac cgccaccccc aggttttgga ccacacatgt tccaccccat
     1201 gggaccaccc cctcctttca tgagggctcc aggaccaatc cactaccctt ctcaggaccc
     1261 tcagagaatg ggtgctcatg caggaaaaca cagcagcccc tagcacaaca ttgccactca
     1321 ggggctctga ggaagaaagg gcgctctaaa gtcccagtaa atgaatcctg ggataagtac
     1381 catttccctt gctttgtagt ttccatggta gctgaatgtg ttcagatgtg ggcagagagc
     1441 acagctatgc ttccccacat gtcttcagag gatcggcggg cctaaaacaa gctgtcatga
     1501 acatagctgc ttaccactat agcagtacta agagccttat gtctgatccc ttcccactct
     1561 gtggggaaca cgcacatggg tgaactggag tgaccaatgg agtccccatc agtgtgttca
     1621 ttttgtatct ttttgggcgg gaggcaaaag ttgacctgcg gtttaaaaaa agtattttga
     1681 ccatttttat gtctatttgg tattttcttt tatatcatct aaaaaaaatt tagtactaat
     1741 cattgtagtg gcataaaagt gatttaacta atttgaagtc ataccctcag agagggtacc
     1801 taagatgata tgcttttaag gaacttcctg tgaaatactt tgacaaactg aaaagaagag
     1861 ccttagagtc catttgactg ggagactgtc tgcctgcctg cagctgggac tggagcatcc
     1921 acatcacctg tgtctgcagt ggctcactcg ctgcctctgg gcaggagact gttcagtctt
     1981 agaaagtttg gatttaactg aattgtagat ggtaagggaa atttgatgtt gtattgtatt
     2041 ttttgttttt aattaaaacg ggtcaatttt ccaaatgtt
//
