LOCUS       NM_199197               1378 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus ribosome binding factor A (Rbfa), mRNA; nuclear gene
            for mitochondrial product.
ACCESSION   NM_199197 XM_129049
VERSION     NM_199197.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC131065.16.
            
            On Dec 21, 2021 this sequence version replaced NM_199197.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK145807.1, BC064066.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-273               AC131065.16        161920-162192       c
            274-493             AC131065.16        159198-159417       c
            494-606             AC131065.16        158784-158896       c
            607-691             AC131065.16        156553-156637       c
            692-759             AC131065.16        154766-154833       c
            760-1378            AC131065.16        153798-154416       c
FEATURES             Location/Qualifiers
     source          1..1378
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="18"
                     /map="18 53.33 cM"
     gene            1..1378
                     /gene="Rbfa"
                     /gene_synonym="1110032A13Rik"
                     /note="ribosome binding factor A"
                     /db_xref="GeneID:68731"
                     /db_xref="MGI:MGI:1915981"
     exon            1..273
                     /gene="Rbfa"
                     /gene_synonym="1110032A13Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             110..1162
                     /gene="Rbfa"
                     /gene_synonym="1110032A13Rik"
                     /note="putative ribosome-binding factor A, mitochondrial"
                     /codon_start=1
                     /product="putative ribosome-binding factor A,
                     mitochondrial precursor"
                     /protein_id="NP_954667.1"
                     /db_xref="CCDS:CCDS29364.1"
                     /db_xref="GeneID:68731"
                     /db_xref="MGI:MGI:1915981"
                     /translation="MWAGVAGLRGSCAGLQALWGGHRAALLLGRSPALHTSVASCGSK
                     NLLKKFASKTRKKFWYEGPSLGSHLTPRPSKHEFLTKTTSKKTRKEDSIRLRVLNGLL
                     YKSLTELLCTPQVSQEVYDLNVELSKVSVTSDFSACRVYWKTGVSAEQNKHTESVLQR
                     SAAYMRHLLISQQTLRNVPPIVFVQDKRDLVLAEVDRLLAEADFGPPDERDDLDGLRN
                     ADAQVPHDSPEPAAHPNLCGIDHEALNKQIMEYKRKKERGLQCQSLAPPSGREQAPEP
                     TRLLRKREKVRSRWQHRDASPRSFLLGEEDEDEDSSTEWECHAHEAEDDDDHQEEELG
                     ADRGAQRGLCGKREQG"
     exon            274..493
                     /gene="Rbfa"
                     /gene_synonym="1110032A13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            494..606
                     /gene="Rbfa"
                     /gene_synonym="1110032A13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            607..691
                     /gene="Rbfa"
                     /gene_synonym="1110032A13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            692..759
                     /gene="Rbfa"
                     /gene_synonym="1110032A13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            760..1378
                     /gene="Rbfa"
                     /gene_synonym="1110032A13Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1353..1358
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rbfa"
                     /gene_synonym="1110032A13Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1378
                     /gene="Rbfa"
                     /gene_synonym="1110032A13Rik"
                     /note="major polyA site"
ORIGIN      
        1 acacacgccc cggggcttcc tgttgtcagg tcaggtcttt ggtagtctag ggcttacacg
       61 cgggtccgtc ctgcgcccac tcgtgtttgc gggccccgcg ccccgaagca tgtgggccgg
      121 cgtcgcgggg ctgagaggct cctgcgccgg gctgcaggct ctgtggggcg gccacagggc
      181 tgcgcttctt ctcggccgct cgccggccct gcacacctcg gtcgcctcct gcggcagcaa
      241 gaacttgctc aagaaatttg cttcgaaaac caggaagaag ttttggtatg aaggtccctc
      301 cctggggtct cacttgaccc ccaggccatc caagcatgag ttcctcacga agaccacctc
      361 aaagaagact aggaaggaag acagcatccg cctgagggtc ctgaacggcc ttctctacaa
      421 atcattgacg gaactgctgt gcactcctca agtgagccag gaggtctacg acctgaatgt
      481 ggagctgtcc aaggtctctg tgacttcaga cttctcagcc tgccgagtgt actggaagac
      541 gggggtctct gcggagcaga acaagcacac ggagtcggtg ctgcagagga gcgctgccta
      601 catgaggcat cttctgatat ctcagcaaac cctgagaaat gttccaccca tagtgtttgt
      661 tcaagacaaa agagacttgg tcctggctga ggtagatcgg ttgctggcag aggctgactt
      721 tggaccccca gatgaaaggg acgacttgga cggtttgagg aacgccgatg cccaggtacc
      781 acatgactcc ccagaaccag ccgcacaccc aaatctgtgt gggattgacc acgaggcgct
      841 gaataagcaa ataatggagt acaaacgcaa gaaggagcga gggcttcagt gtcagagtct
      901 ggcgccacca tcagggcggg agcaggcacc tgaaccgacc cgtctgctcc ggaagagaga
      961 gaaggtgcga tcccggtggc agcaccggga cgcttccccc agaagcttcc ttttgggcga
     1021 ggaggacgag gacgaggaca gcagcacaga gtgggaatgc cacgcccacg aggcagagga
     1081 tgatgatgat catcaggaag aggagctcgg agctgacaga ggcgcacagc ggggcctctg
     1141 tggcaagaga gagcaggggt agggctgggg cctccgagct gccgcccctg cctgtgggtc
     1201 agactgcagg acagagcctc tggtgtacct tctgtcgtag tcactcacgg aggcggcctg
     1261 acctcagcgg caggagaact gcacccatcg gactgcacct gcagacctcc gcagccagtc
     1321 ctcagcgatt ggtacctacc tggtcccgga taaataaacg attttgtatt tactctga
//
