LOCUS       NM_009031               2272 bp    mRNA    linear   ROD 23-JUL-2024
DEFINITION  Mus musculus retinoblastoma binding protein 7, chromatin remodeling
            factor (Rbbp7), mRNA.
ACCESSION   NM_009031 XM_912535
VERSION     NM_009031.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2272)
  AUTHORS   Yang,Y., Huang,K., Jiang,H., Wang,S., Xu,X., Liu,Y., Liu,Q., Wei,M.
            and Li,Z.
  TITLE     Unveiling the role of circRBBP7 in myoblast proliferation and
            differentiation: A novel regulator of muscle development
  JOURNAL   FASEB J 38 (14), e23808 (2024)
   PUBMED   38994637
  REMARK    GeneRIF: Unveiling the role of circRBBP7 in myoblast proliferation
            and differentiation: A novel regulator of muscle development.
REFERENCE   2  (bases 1 to 2272)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   3  (bases 1 to 2272)
  AUTHORS   Li,J., Zheng,H., Hou,J., Chen,J., Zhang,F., Yang,X., Jin,F. and
            Xi,Y.
  TITLE     X-linked RBBP7 mutation causes maturation arrest and testicular
            tumors
  JOURNAL   J Clin Invest 133 (20), e171541 (2023)
   PUBMED   37843278
  REMARK    GeneRIF: X-linked RBBP7 mutation causes maturation arrest and
            testicular tumors.
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 2272)
  AUTHORS   Song,Y., Chen,M., Zhang,Y., Li,J., Liu,B., Li,N., Chen,M., Qiao,M.,
            Wang,N., Cao,Y., Lu,S., Chen,J., Sun,W., Gao,F. and Wang,H.
  TITLE     Loss of circSRY reduces gammaH2AX level in germ cells and impairs
            mouse spermatogenesis
  JOURNAL   Life Sci Alliance 6 (2), e202201617 (2022)
   PUBMED   36414375
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 2272)
  AUTHORS   Price,J.D., Lindtner,S., Ypsilanti,A., Binyameen,F., Johnson,J.R.,
            Newton,B.W., Krogan,N.J. and Rubenstein,J.L.R.
  TITLE     DLX1 and the NuRD complex cooperate in enhancer decommissioning and
            transcriptional repression
  JOURNAL   Development 149 (11) (2022)
   PUBMED   35695185
REFERENCE   6  (bases 1 to 2272)
  AUTHORS   Downes,M., Ordentlich,P., Kao,H.Y., Alvarez,J.G. and Evans,R.M.
  TITLE     Identification of a nuclear domain with deacetylase activity
  JOURNAL   Proc Natl Acad Sci U S A 97 (19), 10330-10335 (2000)
   PUBMED   10984530
REFERENCE   7  (bases 1 to 2272)
  AUTHORS   Blair,H.J., Reed,V., Gormally,E., Wilson,J.B., Novak,J.,
            McInnes,R.R., Phillips,S.J., Taylor,B.A. and Boyd,Y.
  TITLE     Positioning of five genes (CASK, ARX, SAT, IMAGE cDNAs 248928 and
            253949) from the human X chromosome short arm with respect to
            evolutionary breakpoints on the mouse X chromosome
  JOURNAL   Mamm Genome 11 (8), 710-712 (2000)
   PUBMED   10920247
REFERENCE   8  (bases 1 to 2272)
  AUTHORS   Ko,M.S., Threat,T.A., Wang,X., Horton,J.H., Cui,Y., Wang,X.,
            Pryor,E., Paris,J., Wells-Smith,J., Kitchen,J.R., Rowe,L.B.,
            Eppig,J., Satoh,T., Brant,L., Fujiwara,H., Yotsumoto,S. and
            Nakashima,H.
  TITLE     Genome-wide mapping of unselected transcripts from extraembryonic
            tissue of 7.5-day mouse embryos reveals enrichment in the t-complex
            and under-representation on the X chromosome
  JOURNAL   Hum Mol Genet 7 (12), 1967-1978 (1998)
   PUBMED   9811942
REFERENCE   9  (bases 1 to 2272)
  AUTHORS   Zhang,Y., Sun,Z.W., Iratni,R., Erdjument-Bromage,H., Tempst,P.,
            Hampsey,M. and Reinberg,D.
  TITLE     SAP30, a novel protein conserved between human and yeast, is a
            component of a histone deacetylase complex
  JOURNAL   Mol Cell 1 (7), 1021-1031 (1998)
   PUBMED   9651585
REFERENCE   10 (bases 1 to 2272)
  AUTHORS   Qian,Y.W. and Lee,E.Y.
  TITLE     Dual retinoblastoma-binding proteins with properties related to a
            negative regulator of ras in yeast
  JOURNAL   J Biol Chem 270 (43), 25507-25513 (1995)
   PUBMED   7503932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CA556887.1, AK135779.1 and AK078349.1.
            
            On Oct 5, 2007 this sequence version replaced NM_009031.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK078349.1, AK082892.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-86                CA556887.1         1-86
            87-1974             AK135779.1         1-1888
            1975-2272           AK078349.1         1888-2185
FEATURES             Location/Qualifiers
     source          1..2272
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 74.97 cM"
     gene            1..2272
                     /gene="Rbbp7"
                     /gene_synonym="mRbAp46"
                     /note="retinoblastoma binding protein 7, chromatin
                     remodeling factor"
                     /db_xref="GeneID:245688"
                     /db_xref="MGI:MGI:1194910"
     exon            1..336
                     /gene="Rbbp7"
                     /gene_synonym="mRbAp46"
                     /inference="alignment:Splign:2.1.0"
     CDS             321..1598
                     /gene="Rbbp7"
                     /gene_synonym="mRbAp46"
                     /note="G1/S transition control protein-binding protein;
                     retinoblastoma-binding protein 7; histone
                     acetyltransferase type B subunit 2; RBBP-7;
                     retinoblastoma-binding protein p46; nucleosome-remodeling
                     factor subunit RBAP46"
                     /codon_start=1
                     /product="histone-binding protein RBBP7"
                     /protein_id="NP_033057.3"
                     /db_xref="CCDS:CCDS30509.1"
                     /db_xref="GeneID:245688"
                     /db_xref="MGI:MGI:1194910"
                     /translation="MASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVMTHALQWPSL
                     TVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKG
                     EFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKP
                     DPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDA
                     KAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVN
                     CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILAS
                     SGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV
                     SEDNIMQIWQMAENIYNDEESDVTASELEGQGS"
     exon            337..481
                     /gene="Rbbp7"
                     /gene_synonym="mRbAp46"
                     /inference="alignment:Splign:2.1.0"
     exon            482..627
                     /gene="Rbbp7"
                     /gene_synonym="mRbAp46"
                     /inference="alignment:Splign:2.1.0"
     exon            628..801
                     /gene="Rbbp7"
                     /gene_synonym="mRbAp46"
                     /inference="alignment:Splign:2.1.0"
     exon            802..917
                     /gene="Rbbp7"
                     /gene_synonym="mRbAp46"
                     /inference="alignment:Splign:2.1.0"
     exon            918..1078
                     /gene="Rbbp7"
                     /gene_synonym="mRbAp46"
                     /inference="alignment:Splign:2.1.0"
     exon            1079..1205
                     /gene="Rbbp7"
                     /gene_synonym="mRbAp46"
                     /inference="alignment:Splign:2.1.0"
     exon            1206..1283
                     /gene="Rbbp7"
                     /gene_synonym="mRbAp46"
                     /inference="alignment:Splign:2.1.0"
     exon            1284..1360
                     /gene="Rbbp7"
                     /gene_synonym="mRbAp46"
                     /inference="alignment:Splign:2.1.0"
     exon            1361..1418
                     /gene="Rbbp7"
                     /gene_synonym="mRbAp46"
                     /inference="alignment:Splign:2.1.0"
     exon            1419..1529
                     /gene="Rbbp7"
                     /gene_synonym="mRbAp46"
                     /inference="alignment:Splign:2.1.0"
     exon            1530..2272
                     /gene="Rbbp7"
                     /gene_synonym="mRbAp46"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1959..1964
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rbbp7"
                     /gene_synonym="mRbAp46"
                     /note="hexamer: AATAAA"
     regulatory      1972..1977
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rbbp7"
                     /gene_synonym="mRbAp46"
                     /note="hexamer: AATAAA"
     polyA_site      1977
                     /gene="Rbbp7"
                     /gene_synonym="mRbAp46"
                     /note="major polyA site"
     polyA_site      1995
                     /gene="Rbbp7"
                     /gene_synonym="mRbAp46"
ORIGIN      
        1 caatttccca gggcggctgc gcctgcgctc agctgcctgg gcgggctgag aggcgcgggt
       61 tgaaaagtct cgttccaagt ttggcgagag ggagagagag gagagcggct cagacctcgc
      121 tacccgccag cggggaggag gcagaagagg agatcgcggc gtctgggggg agaacccaga
      181 cggccagacc gaactcaggc ttttccgagc gaggactgcg tgacgtgcct gggagaggca
      241 aggagcgcct gccgggctgc tcttgactag cgagagagaa gtccgaggcg gccaaggggg
      301 gcgaaacgac ccgacgcaag atggcgagta aagagatgtt tgaagatact gtggaggagc
      361 gtgtcatcaa cgaagagtat aaaatctgga agaagaatac accgtttctg tatgacctgg
      421 ttatgaccca tgctcttcag tggcccagtc ttaccgttca gtggcttcct gaagtgacta
      481 aaccagaagg aaaggattat gcccttcatt ggctagtgct gggcactcat acatctgatg
      541 agcagaacca tctggtggtt gctcgagttc atattcccaa tgatgatgca cagtttgatg
      601 cttcccactg tgacagtgac aagggagaat tcggtggctt tggttctgta acagggaaaa
      661 ttgaatgtga aattaaaatt aaccatgaag gagaagtgaa tcgtgctcgt tatatgccac
      721 agaatcctca catcattgcc acaaaaacac catcttctga tgttttggtt tttgactata
      781 caaaacaccc tgcaaaacca gatccaagtg gagaatgtaa tcctgatctt agattaagag
      841 gtcaccaaaa ggaaggctat ggtctttcct ggaattctaa tctgagtggg catctcctga
      901 gtgcatctga tgaccatact gtctgcctgt gggatataaa tgcaggacca aaggaaggca
      961 aaattgtgga tgctaaagca atctttactg gccactcagc tgttgtagag gatgtggcct
     1021 ggcatctgct gcatgagtcc ttgtttggat ctgttgctga tgatcagaaa cttatgatat
     1081 gggacaccag atccaatacc acttctaagc cgagccattt ggtggatgca cacaccgctg
     1141 aggtcaactg cctctcattc aatccctaca gcgagttcat tctggcaact ggctctgcag
     1201 ataagactgt agctttatgg gacctgcgta atctgaaact aaaactccac acctttgaat
     1261 cgcataagga tgaaattttc caggtccact ggtctccaca taatgaaact attctggcct
     1321 caagtggtac tgatcgccgc ctgaatgtgt gggatttaag taaaattgga gaagaacaat
     1381 cagcagaaga tgcagaagat gggcctccag agctcctgtt tattcatgga gggcacactg
     1441 ccaagatttc tgacttcagc tggaatccca atgaaccttg ggtcatttgc tctgtgtctg
     1501 aagataacat catgcagata tggcagatgg ctgaaaatat ttacaatgat gaagagtcag
     1561 atgtcacggc atcggaactg gaggggcaag gatcttaaac ccaaagtatg agttgttttt
     1621 attgaatgta ttgctacatg aatgcttgat ttgtcaagcg ccaaaaaggc attgtatagt
     1681 aggaaatgta agtgggacgg cttctggcat tctttaccct ctgattctag cactttcaag
     1741 tgagctgttg cgtactgtat catattgtag ctattagggg ataaaaagga atgttgctta
     1801 agaacggaca tcattgtttt aagacacaca ttgctgggta ttgcctttga ttcaactgtc
     1861 attttctcaa acttttaaag tgcttgctca agttcccaaa tatgcgagga taacttttac
     1921 actttttcct tccaacactt cttgattggc tttgcagaaa taaagtttta aaataaagtt
     1981 tgttttgttc ttttagaaga tgtggaaggg tgggtgggtg tgcatgctcc catctctcat
     2041 agtatatata gatttgtatg agccacatga gcaaccaaag aataatacac agaagctgtt
     2101 aatttcatca tacatattta cttaatctct acagaattga gtagataaaa tcagatttac
     2161 ggtagtgaaa aatctctaca aaatgtcttt gaaaagcaaa acaagactgc ctcttaacaa
     2221 ttcatatcct catgaaagac gtgggctgta aaaataaagc agtgtgttta gc
//
