LOCUS       NM_178045               6370 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus Ras association (RalGDS/AF-6) domain family member 4
            (Rassf4), mRNA.
ACCESSION   NM_178045
VERSION     NM_178045.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 6370)
  AUTHORS   Ray,J.P., Staron,M.M., Shyer,J.A., Ho,P.C., Marshall,H.D.,
            Gray,S.M., Laidlaw,B.J., Araki,K., Ahmed,R., Kaech,S.M. and
            Craft,J.
  TITLE     The Interleukin-2-mTORc1 Kinase Axis Defines the Signaling,
            Differentiation, and Metabolism of T Helper 1 and Follicular B
            Helper T Cells
  JOURNAL   Immunity 43 (4), 690-702 (2015)
   PUBMED   26410627
REFERENCE   2  (bases 1 to 6370)
  AUTHORS   Lai,H.C., Klisch,T.J., Roberts,R., Zoghbi,H.Y. and Johnson,J.E.
  TITLE     In vivo neuronal subtype-specific targets of Atoh1 (Math1) in
            dorsal spinal cord
  JOURNAL   J Neurosci 31 (30), 10859-10871 (2011)
   PUBMED   21795538
REFERENCE   3  (bases 1 to 6370)
  AUTHORS   Stylianou,I.M., Affourtit,J.P., Shockley,K.R., Wilpan,R.Y.,
            Abdi,F.A., Bhardwaj,S., Rollins,J., Churchill,G.A. and Paigen,B.
  TITLE     Applying gene expression, proteomics and single-nucleotide
            polymorphism analysis for complex trait gene identification
  JOURNAL   Genetics 178 (3), 1795-1805 (2008)
   PUBMED   18245842
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY170346.1, BC060709.1, AK036528.1 and AC160973.4.
            
            On Dec 31, 2009 this sequence version replaced NM_178045.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC060709.1, AK139284.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164135 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-45                BY170346.1         2-46
            46-1024             BC060709.1         1-979
            1025-1033           AK036528.1         989-997
            1034-4752           BC060709.1         989-4707
            4753-4761           AC160973.4         139075-139083       c
            4762-6370           BC060709.1         4717-6325
FEATURES             Location/Qualifiers
     source          1..6370
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 53.83 cM"
     gene            1..6370
                     /gene="Rassf4"
                     /gene_synonym="3830411C14Rik; AD037"
                     /note="Ras association (RalGDS/AF-6) domain family member
                     4"
                     /db_xref="GeneID:213391"
                     /db_xref="MGI:MGI:2386853"
     exon            1..113
                     /gene="Rassf4"
                     /gene_synonym="3830411C14Rik; AD037"
                     /inference="alignment:Splign:2.1.0"
     exon            114..207
                     /gene="Rassf4"
                     /gene_synonym="3830411C14Rik; AD037"
                     /inference="alignment:Splign:2.1.0"
     exon            208..283
                     /gene="Rassf4"
                     /gene_synonym="3830411C14Rik; AD037"
                     /inference="alignment:Splign:2.1.0"
     exon            284..426
                     /gene="Rassf4"
                     /gene_synonym="3830411C14Rik; AD037"
                     /inference="alignment:Splign:2.1.0"
     exon            427..518
                     /gene="Rassf4"
                     /gene_synonym="3830411C14Rik; AD037"
                     /inference="alignment:Splign:2.1.0"
     exon            519..679
                     /gene="Rassf4"
                     /gene_synonym="3830411C14Rik; AD037"
                     /inference="alignment:Splign:2.1.0"
     exon            680..781
                     /gene="Rassf4"
                     /gene_synonym="3830411C14Rik; AD037"
                     /inference="alignment:Splign:2.1.0"
     exon            782..833
                     /gene="Rassf4"
                     /gene_synonym="3830411C14Rik; AD037"
                     /inference="alignment:Splign:2.1.0"
     exon            834..955
                     /gene="Rassf4"
                     /gene_synonym="3830411C14Rik; AD037"
                     /inference="alignment:Splign:2.1.0"
     exon            956..1053
                     /gene="Rassf4"
                     /gene_synonym="3830411C14Rik; AD037"
                     /inference="alignment:Splign:2.1.0"
     exon            1054..6344
                     /gene="Rassf4"
                     /gene_synonym="3830411C14Rik; AD037"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      4717
                     /gene="Rassf4"
                     /gene_synonym="3830411C14Rik; AD037"
                     /note="major polyA site"
     regulatory      6322..6327
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rassf4"
                     /gene_synonym="3830411C14Rik; AD037"
                     /note="hexamer: AATAAA"
     polyA_site      6344
                     /gene="Rassf4"
                     /gene_synonym="3830411C14Rik; AD037"
ORIGIN      
        1 gggacggact tgatccctgc agcagatgca gggctcttga gtccgtgcag gcacaattct
       61 agtgcacgcg acctctcttg ctggtggcct ctggaccgcg cgatgactga acggtgacct
      121 ctgggtctga ggacgagagt tgaagatgaa ggaagcttgc tcttccagct ctcatgttcc
      181 tgtcagcgac agcaagtaca ttctgaagtc agaactctta agcctgctca aaacctacaa
      241 ctgctaccat gaaggcagga gctttcagct aagacaccga gaggaagaag ggactctgat
      301 catcgaagga ctcctcaaca ttgcctgggg actcagacga cccatccggc tgcagatgca
      361 ggatgatcgg gagcgagtgc acctgccgtc tgccacatgg gtgcctgaga ggctcagcta
      421 cctccaaaag gaagcttcac cccaggacag caaggtcccc actgaagagc ctggcactca
      481 acctgcaaac aaggcagagg tttccggaga tagctcagga gccctggagg gggaagagga
      541 ggaggtccca cagcttatgc ggacaaagag cgatgccagc tgcataatcc agaggaggtc
      601 caaatcccgg gcaccaagcg aagcccagaa gatacgacgg caccggttct ccatcaatgg
      661 acatttttat aaccacaaga cctcagtgtt cactcctgcc tatgggtctg tgaccaacgt
      721 ccgggttaac agcactatga ccacccagca ggtgctcacc ctgctactaa acaagttccg
      781 ggtagaagat ggtcccagtg agtttgcact ctacaccgtc catgagtctg gggagcagac
      841 aaaattaaaa gattgcgagt acccactgat atccagaatc ctgcatgggc cctgtgagaa
      901 aattgtcaag atcttcttga tggaagctga cttgagcgag gaggtgcccc atgatgttgc
      961 ccagtacatt aagttcgaaa tgccggtgct ggacagtttt gttgaaaaat taaaagaaga
     1021 ggaagaaaga gaaataatca aactgaccat gaagttccaa gccttgcgtc taacaatgct
     1081 gcagcgtctg gaacagctgg tggaggccaa gtaactagcc agagcttgcc ttttgtgatg
     1141 cctgcagtag caagtgtgca tggagtccca gggacccagc tctaactgat cgctgaccaa
     1201 tggttgctgc ccagtaccca tgctcattcc acctctccac ggacgacata gcatcctgca
     1261 tctctagtct tggtaccacg gtgagcatgc acaggcacac ccaggaactt gctggctagg
     1321 atctatgcgc aaagctggcc tacgtggtaa taaagagcct tggaactgtg gtaccagcca
     1381 cattgtatgg ttgattagta tggccagcct tgttcctgtg tatttccagc ttgagagagc
     1441 tgtatagcac ctatccctgg agaatgggtt tcatctgctt gcccagtgcc tgtccctgag
     1501 cctctgcatg gccacaagtc cctgccctta tcacccatgc gaacagaaac tctgtcttcc
     1561 cttgcttctc attgcctctc aggaaccatt ctggagcagg agctgccaac agtcgtgaga
     1621 tatggcctgc ttctaactat tgcttcacca tgatatcctg gcttccgagc ctcctttccc
     1681 agccaacatt cctggcctag aggttagatc gggactagga ctaccaagat ctcctcagct
     1741 cttggcacaa atcaccctta acttgtgagt gtgattcaaa gaaatccttg aaaggagttg
     1801 tcttcaagaa atatgtccat tgaattatgt ttcggaagtt gattcatgta gctgacagtg
     1861 gatccagaag ggtcagtccc cttcactcca tcttgtggat gtctatatat gtctcctgct
     1921 ttccttgaga cagagcttgt ttctctctag tggataggga cagctctcaa tacttcctac
     1981 caaagctctg caaaacatgg aaaaacgtct atttgaggac aaaaggcttc taatccctta
     2041 gatacagata cagaaccact tgtttgctgg ctgattgaaa cctctggaat gaatgagaaa
     2101 actatgcagt ggtttatatc agttttggga atgattgtct aacagcaaac taaaggccag
     2161 cttcttctcc tgaggtctgt ggacagtgga tttaaagaga agtatgatga aggccttcga
     2221 agacagagtt ccatcttcaa ggcagtgcat gtagaagcca ctcatggagc cctgaagagc
     2281 agagtgtgag aacagctgtg cagggggaag ccacaaggca gggtagatgt cgcctctaga
     2341 ttttccagac ccagctctgt ttcacagaga tgctcagctg ccaagagagg tctcttgcct
     2401 cctcccctct ttggcactgt actttcttcg gtgcttaaca aacgcctgtt gtgttgagca
     2461 gaaactgcag gaccaacctt tcttgtgctt cttcttgttg tgcttattgc cttgatctgt
     2521 ttttctaatc cccgaagctg ttgtaccacg ctattaagag ctgcagctga cagaggaacc
     2581 acccacctgt tggaacctgt ccacattgac aggacttctt cacctcgtgc acggtctgag
     2641 aattggtgtg acgcctgagg caaggctgcc ctgctttaga acacaagaaa ggactcactg
     2701 gtggtggcct gtggatggcc tgagcaataa agtcatccta aattgcagaa ttttagcatc
     2761 agaagtgcaa aggaatcttc tagccaaaga ctctgaaatt gaaaacctga actggatttt
     2821 tagcctcaag acatctgcct gtccggtgct cagaggtaat taactgactt gactgtttta
     2881 tgccaggcct gtgctagacc ctggaggaac aaagacagag ccttggtaat tcctcttctg
     2941 gaggagcaga cttggagaca gttatgcgcc tgatattgag tagacagcta agagtgaatg
     3001 gtactgaatg gtactgtaag ccacgagaca gcttccgtcc ctgacccagg aactcactca
     3061 gtgctggggg aaccactgac acaggaaacc ctggaagtgg ccaccaactt ggtggtgttt
     3121 cacagctgtc caaatattac ttaaggcttt ttaaaataag ttttactttc aaactattat
     3181 caaaactaat ttctgaatga ctagagtttg gaaaaactct agcaagttgc acagagcagt
     3241 gctctctgct gtgttcctct gaagtgttca caaatgttag actgacctgc cacatctgct
     3301 cttagaggac aactggagaa ccaacctttg cagggcataa caaccccaga acttgagact
     3361 atggaggctg tggcttcaca gtgcgcttgg gctatcacct gcgatggagg tcacagcctt
     3421 ctggtgtgtt ctccacttct cagatgataa aggtatctat agataaagtg aagatcccgg
     3481 ttagaaagga ctgtcttcca aaatagatct gtcctcagag cttcacatag taaacagcac
     3541 aggtcgaaat cagtgtgatt acaagattgc aaaagtcccg agctcaggat aaacagggtt
     3601 gtttgtccag atcaaatgac cagaacggat cggaaacagg agtaggggaa agacttgttt
     3661 ttctaaagca ataataacct ttagactttc tcagtgacaa aacaaagtct ttcacccaga
     3721 atacatctgg cttcttggtc acagggcaag gagagagggc ttatttactc tactcaggtg
     3781 atctggtagg aactggaatt atgccagctg cactgtgtga acacagctgc agagtgacag
     3841 gccatggaat gtccttatca ggagtactct gactaccagg tcctcaggcc ctctgaccct
     3901 catcagtggc aagcaggaag tctgctaggt cccagccagg cagtagcacg tttcaaaaca
     3961 accagacgca tggactatat ttaggcccca agaactacac ttgggtatta gccagctgct
     4021 gacgtgccag gagcctcaca gagcctgagg tggggttctg tgccctccag cagggttggg
     4081 acaatggttt gctgctaatc taagaacatg gcaattccca gggtttcctt tttcatccag
     4141 cccaaggggc ataagacagt gcctcaggct tgtctaactg actcattgtc caggctcctg
     4201 ggctgaagga cccactttga gagaaataga gcatgtttga tcccatactc aggccattca
     4261 aatgacccgt cctgctgtcc ctggactgtg ggtcagttct gcccatgaca gcagcactcc
     4321 tcactgatac agggcttact catgtacatg tacgtacacc tgcatgtgta gcaaaacact
     4381 tatgtgaaga ccagggtcta aggaacaaaa ccacagaaaa gggaaattac tttgctaggc
     4441 tgtttctcag ctgttgttgt tgttgttgtt gttgttctac atttcttgtt ctataatgtt
     4501 ctttaaatat tcaacccact ctgggtaagt ggcccctgtg gtgcagatct ccagagaagc
     4561 tacagtcact gaactaagac tccccagaaa gaaaatctgc taggtgccca ggctgtggcc
     4621 tctcctctta ccctttgtct tcttctccct ttgtctgagg actacatgtg actgttcctc
     4681 ataatttaat ttacttaaaa atgacgtggt tccaaaactt gactctgtta agtgtgtgca
     4741 tgcggctgtt tcgccacatc tggtcctcgt gtgtgagaac cagctgccaa aggcagaagg
     4801 tgctgtgaat cgaaccggag gcacagatcg accccagagt gcagagtgta acttatggat
     4861 tcacaggctt ccttccgtgg cctgagaagc aacaaggcag aagatcctca tatctcaagt
     4921 aggagtaaga cgtttctaca tcactccaga caagtgtggg ctgcagttaa ccagtatata
     4981 ccacatctct ctccaaagct gttgtcacat ccagtatgag ttaagaatac tgtgtgtcag
     5041 tgaccagcac agagtgcttg ggtatcctaa cagctttgtc tcacagggct ggtgatgtgg
     5101 gccaaggtca gctggtaggc aatatggcag gtatagtgag catgcctttc atcacgtcag
     5161 actggattct acactgggga agttacttgc ctcaatttcc ccatcagtca gataggggta
     5221 aacatggttc ctagctctca aggttactga gagtcatagc tttattgcca taacaaggcc
     5281 agaaatctca gcatcacagg agactataca tctctcagaa actgtgggac tatatagtac
     5341 ccatggtgtg ttctgatcga tcctggatcc ccggactcct tgggacatgc tattgaagca
     5401 gagtgacggt gggagcgtgt gtatcggggc tgcttctggg ccactgtgtt gcctccatcc
     5461 gttcttgagc agtgttgagt cccctagtaa agtcctcatc tggagctaca cactctaggt
     5521 tgtgtggggc tcaaccttcc taatgctcca atcctttaat acacttcctc atggtgtgaa
     5581 gacctcccga ccataataat tacttttgtt gctgcttcgc aactgtaatt ctgctactgt
     5641 tatgtatgaa tcgcagtgta aatatctgat attaccagtg gtcttcgtcg acccctgaaa
     5701 gggatcatca gaccccaaag gggttgtgac aacccacagg ttgagaattg ctgcactggg
     5761 gactctgaga attgccccca ccccccaata cagaaaagaa caaagatcaa agaagatgtc
     5821 ccacacagcc attatggtcg tgctatggta gtgttaaaga acttaaaggt tcctcagacc
     5881 tggctgaagt gtagcaatcg gatgtgttat gctaacatat gacccagggc atggggcttt
     5941 gattgctcac accgcttttc tttgccactt tgatgctcgt gtcctttcct ggcccaggcc
     6001 tctccccagg cttccctccc agtctttcca ctcacagtgg ctttgctcct ttctttcctc
     6061 acatttgtct ccttccaaaa cgccaccact ctttgactgc ctgcctaatc tcaatccctt
     6121 tgggcctttt gtagctgatg tagctgtttt ttctatacag gcaagaagga tgctctctct
     6181 acctttaagt gaggcaacaa agacttacga ctcatgacta gtagtctcag tgcattttgg
     6241 ctcttgcatt ttttcctagt ccaccagtgc ccaccaccat tgctcaccgc tggcaccaac
     6301 cacgtatgac aacagtttag taataaaatt agcaataaat catgaaaaaa aaaaaaaaaa
     6361 aaaaaaaaaa
//
