LOCUS       NM_001033158            2430 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus RAS-like, family 12 (Rasl12), transcript variant 1,
            mRNA.
ACCESSION   NM_001033158 XM_134870
VERSION     NM_001033158.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2430)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC114645.9 and BC125036.1.
            
            On Jul 8, 2009 this sequence version replaced NM_001033158.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data because no single transcript from the same
            strain was available for the full length of the gene. The extent of
            this transcript is supported by transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK171623.1, AK014511.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-23                AC114645.9         129124-129146       c
            24-1058             BC125036.1         1-1035
            1059-2430           AC114645.9         114926-116297       c
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 35.28 cM"
     gene            1..2430
                     /gene="Rasl12"
                     /gene_synonym="4631404I11Rik"
                     /note="RAS-like, family 12"
                     /db_xref="GeneID:70784"
                     /db_xref="MGI:MGI:1918034"
     exon            1..180
                     /gene="Rasl12"
                     /gene_synonym="4631404I11Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             78..878
                     /gene="Rasl12"
                     /gene_synonym="4631404I11Rik"
                     /EC_number="3.6.5.2"
                     /note="isoform 1 is encoded by transcript variant 1;
                     ras-like protein family member 12"
                     /codon_start=1
                     /product="ras-like protein family member 12 isoform 1"
                     /protein_id="NP_001028330.2"
                     /db_xref="CCDS:CCDS23290.1"
                     /db_xref="GeneID:70784"
                     /db_xref="MGI:MGI:1918034"
                     /translation="MSSVFGKPRAGSGPHSVPLEVNLAILGRRGAGKSALTVKFLTKR
                     FISEYDPNLEDTYSSEETVDHQPVHLRVMDTADLDTPRNCERYLNWAHAFLVVYSVDS
                     RASFEGSSSYLELLALHAKETQRGYPALLLGNKLDMAQYRQVTKAEGAALAGRFGCLF
                     FEVSACLDFEHVQHVFHEAVREVRRELDKSPLARPLFISEEKTLSHQTPLTARHGLAS
                     CTFNTLSTASLKEMPTVAQAKLVTVKSSRAQSKRKAPTLTLLKGFKIF"
     exon            181..237
                     /gene="Rasl12"
                     /gene_synonym="4631404I11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            238..311
                     /gene="Rasl12"
                     /gene_synonym="4631404I11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            312..502
                     /gene="Rasl12"
                     /gene_synonym="4631404I11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            503..2430
                     /gene="Rasl12"
                     /gene_synonym="4631404I11Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2405..2410
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rasl12"
                     /gene_synonym="4631404I11Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2430
                     /gene="Rasl12"
                     /gene_synonym="4631404I11Rik"
                     /note="major polyA site"
ORIGIN      
        1 atagtctgag tgactggggg cgtgcaacta gcagcccatc gggccgggag accggcgtgg
       61 ccatctgcag cttcgccatg tcgtcggtgt tcggcaagcc ccgagctggc agcgggccgc
      121 acagcgtgcc cctggaagtt aacctggcta tccttgggcg ccgcggagcg ggcaagtctg
      181 ccctgacggt gaagttcctc accaagaggt ttatcagcga atatgatccc aatttggagg
      241 acacctacag ctctgaggag actgtggacc accagcctgt gcacctgagg gtcatggaca
      301 ctgcagacct ggacaccccc aggaactgcg agcgctacct gaactgggcc catgccttct
      361 tggtggtgta tagtgtcgat agtcgtgcga gtttcgaggg cagcagcagc tacctagagc
      421 tgctggcctt gcatgccaag gagacacaac gtggctaccc tgctctgctg ctgggcaaca
      481 agcttgacat ggcccagtac aggcaagtca ccaaggctga gggtgcagct ttggcaggca
      541 gattcgggtg cctgtttttt gaggtctctg cctgcctgga ctttgagcac gtgcagcacg
      601 tcttccatga ggccgtgcgt gaggtgcggc gagagctgga taagagtccc ctggcccggc
      661 ccctcttcat ctctgaggag aaaaccctgt cccaccagac cccgctcaca gcccggcatg
      721 ggctggccag ctgtactttc aacactctct ctactgccag cctgaaagag atgcccactg
      781 tggcccaggc caagttggtc actgtgaaat catctcgtgc ccagagcaag cgcaaggcac
      841 ccaccttgac tctactgaag ggcttcaaga tcttctgagg acccttctgc aagaacttag
      901 gctcagctga tgcttggggc tgcagggaat gggctgtgtt gcactctgat gaaccaatgg
      961 cccttaccct ctggtagata gcaggttcca cctccagcac caagcagggt ccctatgtgc
     1021 tcactatgtg atccagaggg acaggcaagg atgctgctcc tgactgcctc accctgcttc
     1081 cttgccaggc aagggcctgg gctccatggt aacctctgca tccaccaccc tggaaggaag
     1141 ctgcccctgt tacagacagg agacccggag tcagctgcaa gcagaaagga actgcagtac
     1201 aaatcctgtg tcatgactct cctgctccag ccactgccag gccagctgca gccccggttc
     1261 aaagaggctt tgtctatgtg aaggcttgct aacagtctac aggatggctg gccccgaggt
     1321 cctaccatca cctggtggta gaaagaggcc agctgttcag aggcccaaag tttatccaag
     1381 aaaattctag ttaaaataat cctatgtgaa ggcttggata gggcaaagac acttggacag
     1441 gagtccttca gcatttacct ctaaatgaag ggtgcagaga aggtctgtgg gttgtccagg
     1501 ctagaaagcc tccaacattt ttttcaccag catttggggg actactatga ccactttgtt
     1561 agtagacacc cccccctcca ggactctctt cttgagcttg atgaccaagg ctgcagaaaa
     1621 tcattctacc caggcacagt cctcagggag tccacagctg gtgggattag acatcctctg
     1681 gtgggagcca ctggcctgcc cactgtaaag taggtgcagt ctggtttggt tggtcctagg
     1741 accttagcaa tgggattgat tgttcaacac ctattttggt aagatagatc ccaaagcatt
     1801 tgagattaat atgacagaat tttacataaa ctattcagta ttttaccaag gctcatgtgt
     1861 aagaagtctg tcccaggcag gagctgcagc gatttcttac tgtttaccac aaattctgga
     1921 tgagcaggct caggaacagg gcatgagaag gcctgggctg ggcaccctag gaaagctggc
     1981 tcctttggct cccagatagc aagcagccca ggcgcttgaa tggagaagat ctctaaccca
     2041 gtcttcagct ctagtcgata gctggagaag ctgaggtcag agggaggccc tgacctaccc
     2101 aggggcacat cctgcaagtc ctggcccttt gtcctgacca atggccagct ctgaacttta
     2161 tacttttaag atagggtctc tttattatgt aggtctggct gtcctggaac tcactatgca
     2221 aaccaggcta gagttgaact cacagagatc cacctgcctc agccttctga gcgctggaat
     2281 taaaggcttc cacctcacat ggccgaactt tgtattttca atgcaagccc ctagtgtgtg
     2341 ctttgtagac accatcatct gaacccagga cacaattcca gctgcccacc tggagaggca
     2401 tttgaataaa agactttttt aaataacaaa
//
