LOCUS       NM_001164763            1411 bp    mRNA    linear   ROD 31-DEC-2024
DEFINITION  Mus musculus retinoic acid receptor responder (tazarotene induced)
            1 (Rarres1), mRNA.
ACCESSION   NM_001164763 XM_001475793 XM_973599
VERSION     NM_001164763.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1411)
  AUTHORS   Kaminski,C.L., Banik,D.D., Schmitd,L.B. and Pierchala,B.A.
  TITLE     Identification of a postnatal period of interdependent neurogenesis
            and apoptosis in peripheral neurons
  JOURNAL   Biol Open 13 (11) (2024)
   PUBMED   39527572
REFERENCE   2  (bases 1 to 1411)
  AUTHORS   Feng,Y., Sun,Z., Fu,J., Zhong,F., Zhang,W., Wei,C., Chen,A.,
            Liu,B.C., He,J.C. and Lee,K.
  TITLE     Podocyte-derived soluble RARRES1 drives kidney disease progression
            through direct podocyte and proximal tubular injury
  JOURNAL   Kidney Int 106 (1), 50-66 (2024)
   PUBMED   38697478
  REMARK    GeneRIF: Podocyte-derived soluble RARRES1 drives kidney disease
            progression through direct podocyte and proximal tubular injury.
REFERENCE   3  (bases 1 to 1411)
  AUTHORS   Patel,J., Xun,D., Creswell,K., Kim,D.K., Wu,M., Hwang,J.W.,
            Kim,T.S., Bansal,S., Hong,S.H., Galli,S., Kim,H.J., Deng,C.,
            Byers,S.W. and Lee,M.H.
  TITLE     Loss of RARRES1 function Promotes Follicular Lymphomagenesis and
            Inhibits B cell Differentiation in Mice
  JOURNAL   Int J Biol Sci 18 (7), 2670-2682 (2022)
   PUBMED   35541897
  REMARK    GeneRIF: Loss of RARRES1 function Promotes Follicular
            Lymphomagenesis and Inhibits B cell Differentiation in Mice.
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1411)
  AUTHORS   Moller-Hackbarth,K., Dabaghie,D., Charrin,E., Zambrano,S.,
            Genove,G., Li,X., Wernerson,A., Lal,M. and Patrakka,J.
  TITLE     Retinoic acid receptor responder1 promotes development of
            glomerular diseases via the Nuclear Factor-kappaB signaling pathway
  JOURNAL   Kidney Int 100 (4), 809-823 (2021)
   PUBMED   34147551
  REMARK    GeneRIF: Retinoic acid receptor responder1 promotes development of
            glomerular diseases via the Nuclear Factor-kappaB signaling
            pathway.
REFERENCE   5  (bases 1 to 1411)
  AUTHORS   Chen,A., Feng,Y., Lai,H., Ju,W., Li,Z., Li,Y., Wang,A., Hong,Q.,
            Zhong,F., Wei,C., Fu,J., Guan,T., Liu,B., Kretzler,M., Lee,K. and
            He,J.C.
  TITLE     Soluble RARRES1 induces podocyte apoptosis to promote glomerular
            disease progression
  JOURNAL   J Clin Invest 130 (10), 5523-5535 (2020)
   PUBMED   32634130
  REMARK    GeneRIF: Soluble RARRES1 induces podocyte apoptosis to promote
            glomerular disease progression.
REFERENCE   6  (bases 1 to 1411)
  AUTHORS   Mocker,A., Schmidt,M., Huebner,H., Wachtveitl,R., Cordasic,N.,
            Menendez-Castro,C., Hartner,A. and Fahlbusch,F.B.
  TITLE     Expression of Retinoid Acid Receptor-Responsive Genes in Rodent
            Models of Placental Pathology
  JOURNAL   Int J Mol Sci 21 (1), 242 (2019)
   PUBMED   31905805
  REMARK    GeneRIF: RARRES1 and 2 may have different expression and roles in
            human and rodent placentas, thereby underlining immanent
            limitations of comparative interspecies placentology.
            Publication Status: Online-Only
REFERENCE   7  (bases 1 to 1411)
  AUTHORS   Furlan,A., La Manno,G., Lubke,M., Haring,M., Abdo,H.,
            Hochgerner,H., Kupari,J., Usoskin,D., Airaksinen,M.S., Oliver,G.,
            Linnarsson,S. and Ernfors,P.
  TITLE     Visceral motor neuron diversity delineates a cellular basis for
            nipple- and pilo-erection muscle control
  JOURNAL   Nat Neurosci 19 (10), 1331-1340 (2016)
   PUBMED   27571008
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK077393.1, AV243667.1 and AC124190.4.
            
            On or before Sep 18, 2009 this sequence version replaced
            XM_973599.1, XM_001475793.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK077393.1, SRR7345562.4192100.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164135, SAMN01164139
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1325              AK077393.1         1-1325
            1326-1405           AV243667.1         165-244
            1406-1411           AC124190.4         35300-35305
FEATURES             Location/Qualifiers
     source          1..1411
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 30.99 cM"
     gene            1..1411
                     /gene="Rarres1"
                     /gene_synonym="5430417P09Rik"
                     /note="retinoic acid receptor responder (tazarotene
                     induced) 1"
                     /db_xref="GeneID:109222"
                     /db_xref="MGI:MGI:1924461"
     exon            1..363
                     /gene="Rarres1"
                     /gene_synonym="5430417P09Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             109..960
                     /gene="Rarres1"
                     /gene_synonym="5430417P09Rik"
                     /codon_start=1
                     /product="retinoic acid receptor responder protein 1
                     precursor"
                     /protein_id="NP_001158235.1"
                     /db_xref="CCDS:CCDS57216.1"
                     /db_xref="GeneID:109222"
                     /db_xref="MGI:MGI:1924461"
                     /translation="MQPRQPPMPALLLSLWLLPSLALAAAVTEPADLEYTEVPRQPAA
                     VGLPRGILQLAARAALHFFNFRAGSPSALRVLATVQEGRAWVNPQEGCEVDLVFSTEQ
                     YNPEQEGERLGKCSARVFFKNEKPRPAVNVTCARLFDKVKRQEKDYRLYKQMKQLKTP
                     LHSISIPDSHGHIDNSLRPLWDLAFLGSSYVMWEKTTQVLHYYLVQLSSVERLKTDDD
                     SIDFDFTVLLHEFSTQEIIPCRIHLVWYPGKPLKVNYHCQEQQSPEEASGTMEASAMA
                     PPEFGNF"
     exon            364..429
                     /gene="Rarres1"
                     /gene_synonym="5430417P09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            430..610
                     /gene="Rarres1"
                     /gene_synonym="5430417P09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            611..747
                     /gene="Rarres1"
                     /gene_synonym="5430417P09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            748..810
                     /gene="Rarres1"
                     /gene_synonym="5430417P09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            811..1411
                     /gene="Rarres1"
                     /gene_synonym="5430417P09Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1386..1391
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Rarres1"
                     /gene_synonym="5430417P09Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      1406
                     /gene="Rarres1"
                     /gene_synonym="5430417P09Rik"
                     /note="major polyA site"
ORIGIN      
        1 gagtggccgc cgtggcctat ttccgtgagc actgcgaacc gggtccaggg agctcagcgc
       61 cagctttccc catccacgca gccccgtggg cccctgccgc ccgtgtccat gcagccccgt
      121 caacccccga tgccagcgct gttgctgagc ctctggctgc tgccgagcct cgcactggcc
      181 gctgctgtca ctgagcccgc ggacctggaa tacaccgaag tcccccggca gcccgcggcc
      241 gtggggctgc cacgcgggat cctgcagctg gcggcgcgcg ctgcgctgca cttcttcaac
      301 ttccgcgcgg gctcgcccag cgcgctacgg gtgctggcca ccgtgcagga gggccgcgcg
      361 tgggtcaacc ctcaagaagg ctgcgaagtg gacttggtat ttagcacaga gcaatacaac
      421 cccgagcagg aaggtgaacg tttgggcaaa tgttctgcga gggtgttttt caagaatgaa
      481 aaacccagac cggccgttaa tgtaacgtgc gcacggctct ttgataaagt gaagagacaa
      541 gagaaggatt atcggcttta caagcagatg aagcaattga agactcctct gcacagcatc
      601 agcatacctg acagtcatgg acacattgat aattcactga gacccctgtg ggacttggcc
      661 ttcctcggca gctcatacgt gatgtgggag aagacaaccc aggtcctgca ctattacttg
      721 gtccagctca gcagtgtgga gcggctgaaa acggatgatg acagcatcga ctttgacttc
      781 actgttctgc ttcatgaatt ctccacacag gaaatcattc cctgccgtat tcacttggtc
      841 tggtacccag gtaaacccct taaagtcaat taccactgtc aagagcagca gagcccagaa
      901 gaagcctctg gaactatgga agcatcagct atggcaccgc cagagttcgg taatttctaa
      961 agagaagaaa tgatctgctt ctattatatt ctaaacacca cggtggtgct gaactccacg
     1021 agcatgcgca ctttcctgat tgggctccct gattgggctc ggcaggctca gcacatctac
     1081 cacatagcag atggatcaac aattgctttg ggaaaaggtt tcgtcttttt tgttttgagt
     1141 ttgtattttt cattactctg gacatattgt ggttatttta tgttgctgaa ttgttcttat
     1201 tttgtcaact tttttttttc agtgaaagta aatattaact gctaatctca ggcaaatatt
     1261 tccttttagc gtgataccca ctttcgaata agtgtttata tttctaagta ataaaatgtg
     1321 tttgtaagct ttggtatgga tgtaaaattt gagctaacct ggaattaaat caaatcccaa
     1381 tgttgattaa aaccttataa atagcactgt c
//
