LOCUS       NM_177721               4867 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus RAN binding protein 6 (Ranbp6), mRNA.
ACCESSION   NM_177721 XM_484796
VERSION     NM_177721.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4867)
  AUTHORS   Distler,U., Schmeisser,M.J., Pelosi,A., Reim,D., Kuharev,J.,
            Weiczner,R., Baumgart,J., Boeckers,T.M., Nitsch,R., Vogt,J. and
            Tenzer,S.
  TITLE     In-depth protein profiling of the postsynaptic density from mouse
            hippocampus using data-independent acquisition proteomics
  JOURNAL   Proteomics 14 (21-22), 2607-2613 (2014)
   PUBMED   25211037
REFERENCE   2  (bases 1 to 4867)
  AUTHORS   VanBuren,V., Piao,Y., Dudekula,D.B., Qian,Y., Carter,M.G.,
            Martin,P.R., Stagg,C.A., Bassey,U.C., Aiba,K., Hamatani,T.,
            Kargul,G.J., Luo,A.G., Kelso,J., Hide,W. and Ko,M.S.
  TITLE     Assembly, verification, and initial annotation of the NIA mouse
            7.4K cDNA clone set
  JOURNAL   Genome Res 12 (12), 1999-2003 (2002)
   PUBMED   12466305
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC139396.1, BC056759.1 and BQ561129.1.
            
            On Aug 26, 2009 this sequence version replaced NM_177721.3.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-21                BC139396.1         1-21
            22-4575             BC056759.1         1-4554
            4576-4867           BQ561129.1         1-292               c
FEATURES             Location/Qualifiers
     source          1..4867
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 24.42 cM"
     gene            1..4867
                     /gene="Ranbp6"
                     /gene_synonym="C630001B19"
                     /note="RAN binding protein 6"
                     /db_xref="GeneID:240614"
                     /db_xref="MGI:MGI:2683212"
     exon            1..4867
                     /gene="Ranbp6"
                     /gene_synonym="C630001B19"
                     /inference="alignment:Splign:2.1.0"
     CDS             25..3342
                     /gene="Ranbp6"
                     /gene_synonym="C630001B19"
                     /codon_start=1
                     /product="ran-binding protein 6"
                     /protein_id="NP_808389.2"
                     /db_xref="CCDS:CCDS37954.1"
                     /db_xref="GeneID:240614"
                     /db_xref="MGI:MGI:2683212"
                     /translation="MAAAGSAGLPATVSEKQEFYQLLKNLINPSCMVRRQAEEVYENI
                     PGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPPEVQRDVKIELI
                     LAVKLETHASMRKKLCDIFAVLARNLIDESGTNHWPEGLKFLIDSIHSKNVVLWEVAL
                     HVFWHFPGIFGNQDRHDLDIIKRLLDQCIQDQEHPAIRTLSARAAATFVLANENNIAL
                     FKDFADLLPGILQAVNDSCYQDDDSVLESLVEIADTVPKYLGPYLEDTLQLSLKLCGD
                     SRLSNLQRQLALEVIVTLSETATPMLKKHTNIIAQAVPHILAMMVDLQDDDDWVNADE
                     MEEDDFDSNAVAAESALDRLACGLGGKVVLPMTKEHIMQMLQSPDWKCRHAGLMALSA
                     IGEGCHQQMEPILDETVNSVLLFLQDPHPRVRAAACTTLGQMATDFAPSFQKKFHEIV
                     ITALLRTMENQGNQRVQSHAASALVIFIEDCPKSLLILYLENMVKSLHSILVIKLQEL
                     IRNGTKLALEQLVTTIASVADAIEESFIPYYDIFMPSLKHVVELAVQKELKLLRGKTI
                     ECISHVGLAVGKEKFMQDASNVMQLLLKTQSDLNNMEDDDPQTSYMVSAWARMCKILG
                     KDFEQYLPLVIEPLIKTASAKPDVALLDTQDVENMSDDDGWQFVNLGDQQSFGIKTSG
                     LEAKATACQMLVYYAKELREGFVEYTEQVVKMMVPLLKFYFHDNVRVAAAEAMPFLLE
                     CARIRGSEYLSQMWQFICDPLIKAIGTEPDTDVLSEIMNSFAKSIEVMGDGCLNDEHL
                     EELGGILKAKLEGHFKNQELRQVKRQEENYDQQVEMSLQDEDECDVYILTKVSDILHS
                     LFSTYKEKILPWFEQLLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKYVEYF
                     RWPMLLNMRDNNPEVRQAAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKK
                     NVIATENCISAIGKILKFKPNCVNVDEVLPHWLSWLPLHEDKEEAIQTLNFLCDLIES
                     NHPVVIGPNNSNLPKIISIIAEGKINETISHEDPCAKRLANVVRQIQTSEELWLECTS
                     QLDDEQQEALHELLSFA"
     regulatory      4550..4555
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ranbp6"
                     /gene_synonym="C630001B19"
                     /note="hexamer: AATAAA"
     polyA_site      4575
                     /gene="Ranbp6"
                     /gene_synonym="C630001B19"
                     /note="major polyA site"
ORIGIN      
        1 tcgcggtagc tttgacagga cgcgatggcg gcggccgggt ctgcagggtt gccggcgacc
       61 gtgtcggaaa agcaggagtt ttaccagctt ctgaagaacc tgatcaatcc aagctgcatg
      121 gtgcggaggc aagccgagga ggtctatgag aatatcccag gtctgtgtaa gactacattt
      181 ctcttagacg ccgtccgaaa tagaagagca ggttatgagg tgagacaaat ggctgccgca
      241 ctgctacgac ggcttttgtc ctcagggttt gaggaggtct atccaaatct acctcctgaa
      301 gtgcagaggg atgtcaagat tgaactgata ctggccgtta agttagaaac acatgctagc
      361 atgaggaaaa agctttgtga tatttttgcg gtgctggcca ggaatttgat agatgagagt
      421 ggcactaacc attggccaga aggtctgaaa ttcctcattg attcgattca ctctaaaaat
      481 gtggttctgt gggaagttgc acttcacgtt ttctggcact ttcctgggat ttttgggaac
      541 caggatcgtc acgatttgga tatcatcaag aggttgttgg accagtgtat tcaagatcag
      601 gagcatccag caatcaggac attatctgct agagctgcag ctacgttcgt ccttgctaat
      661 gaaaacaata ttgctctttt caaagacttt gcggatttgc ttcctgggat cttacaggct
      721 gtgaatgatt cctgctacca ggatgatgat tctgtgctag aatcccttgt tgagattgca
      781 gatactgtac ctaagtactt gggtccctat ctagaagata ctctgcagtt gagcctgaag
      841 ttgtgtggag actctaggct tagtaacctg caacgccagc tggctctgga agtaatagtc
      901 accttatctg aaactgcaac tccaatgttg aaaaagcata cgaatattat tgcacaggct
      961 gtgcctcata tattagcaat gatggttgat cttcaagatg atgatgactg ggtaaatgct
     1021 gatgaaatgg aagaagatga ctttgacagc aatgcggttg ctgctgagag tgccctagac
     1081 agactggctt gtggacttgg tgggaaagtt gttttgccaa tgaccaagga gcatatcatg
     1141 cagatgcttc agagccctga ctggaaatgt cgacacgccg gattaatggc cttatcagcc
     1201 attggagaag gttgccatca gcaaatggaa ccaattctag atgaaacagt taactcggtt
     1261 ttactttttc ttcaggatcc tcatccaagg gtaagggctg ctgcctgtac tacacttgga
     1321 cagatggcta cagattttgc acctagtttc caaaagaaat tccatgagat agtgattaca
     1381 gctttgttgc gaaccatgga aaaccaaggt aatcaacgtg tgcaatctca cgcagcttct
     1441 gctcttgtta tttttattga agactgcccc aagtcattgc taattctata tttggaaaat
     1501 atggtaaaaa gtctccattc catcttggta attaaacttc aagagctgat tcggaatgga
     1561 actaagttgg ccttagaaca acttgtgaca accattgctt ccgttgcaga tgcaatagaa
     1621 gaaagcttta ttccatatta tgatatattt atgccctcac tcaaacacgt tgttgagctc
     1681 gctgttcaaa aggaactcaa gcttcttcga ggaaaaacta ttgaatgcat tagccatgtt
     1741 ggacttgccg ttgggaagga aaaatttatg caagatgcat caaatgtgat gcagttactg
     1801 ttgaaaacac aatcagactt aaataacatg gaagatgatg accctcagac ttcttacatg
     1861 gtttcagcct gggctagaat gtgtaaaatc cttggcaaag actttgagca atatctccca
     1921 ctggttattg agccacttat caagactgct tcagctaagc ctgatgtcgc tctcttagac
     1981 acacaggatg tggagaacat gagtgacgac gatggctggc agtttgtaaa cctcggagac
     2041 cagcaaagct ttggcatcaa aacttcagga cttgaagcaa aagcaactgc ttgccagatg
     2101 ttggtttact atgcgaagga gttaagagaa ggatttgtgg aatacacgga acaagttgtg
     2161 aagatgatgg ttcctctgct gaaattttat tttcatgaca atgttcgagt ggcagctgcg
     2221 gaagccatgc cctttctctt ggaatgtgca agaattcgtg gctcagagta tctttcacag
     2281 atgtggcagt ttatatgtga tcccttaatc aaggcaattg gaactgaacc tgatacagat
     2341 gtactctcag aaataatgaa ttcttttgcc aagtccattg aggtcatggg agatggttgc
     2401 ctcaacgatg aacacttgga agaactggga ggaattttga aggcaaaact tgaagggcac
     2461 tttaaaaacc aagagttacg gcaagtaaaa aggcaagaag aaaattatga ccaacaggtt
     2521 gaaatgtctc ttcaagatga ggatgaatgt gatgtttata ttctgaccaa agtatcagat
     2581 attttgcact cattatttag tacttacaag gaaaaaattt tgccatggtt tgagcagcta
     2641 ctcccactaa ttgtaaatct aatttgttca agtaggccat ggccagacag acaatgggga
     2701 ctatgcatat ttgatgacat catagagcat tgcagtccaa cctcattcaa gtatgttgag
     2761 tatttccggt ggccgatgct tctcaatatg cgagacaaca accctgaagt cagacaagct
     2821 gctgcttatg gactgggagt catggcacag tttggtggag atgactaccg ttccttgtgt
     2881 tcagaagccg ttccactctt ggtaaaagtt attaagtgtg caaattccaa aaccaaaaag
     2941 aatgtgattg ctacagagaa ctgtatctca gcaatcggaa agattctgaa gtttaagccc
     3001 aactgtgtaa atgtggatga agttctccca cactggttat cgtggcttcc gctgcatgaa
     3061 gataaagaag aagctattca gactttgaat tttctctgtg acctaattga aagcaaccac
     3121 ccagttgtga ttggtccaaa taattccaat cttcccaaaa tcatcagtat aatcgcagaa
     3181 ggaaaaatta atgaaactat tagccatgaa gacccctgtg ccaaacgcct agctaatgtt
     3241 gtccgtcaga tacagacttc tgaagaattg tggttggaat gcacatctca actcgatgat
     3301 gagcagcagg aagctttaca tgagttactc agttttgctt gaagcagttt aataccatct
     3361 atcataaaag tagctacaac gtgtcgtgag tggattcatt acaaatgaga gatataccat
     3421 ttctctctgc taagcagttc atacttctat gtttctccag gattagtgtt aaggtctcct
     3481 gtttactttg cacgtgtcac ttcttaaact gtggttgtaa cctgtgcttc cagttgtcct
     3541 agagttattt gtcaccttcc ccctatttag tgtgaaatgt ataaattgtt atttgtctga
     3601 cctattgatg ctgggcagac ggtatatttt gtgccaagat gtctgtgact gtcacaagat
     3661 gcaaaaaagc tcacaaagaa agggagactt ccaggttaaa catttctgga attgagggtg
     3721 aagaatacag tggcagactt gttcttcctt ggtaatactg tgtttgttac agtgagggac
     3781 ggatgctaga actgagtgtg tcaaggtatg gcagtggttg taggagttgt tttctacaat
     3841 ataagtgaac cttttcatat ggtactcctg aaaagtggtt atagcatgtc taaaaacagt
     3901 tcctaaagta tccagctgag agttatgaga acttttaaat ctccttaacc aaactggttt
     3961 aaaagaattt atctagaact gaaacattca tgggtgtgga ggaggtactg aggagacatt
     4021 taacactgaa agaatctgac agactagaac agtgtaataa atactaaata gtcagtgttt
     4081 gtgggagtca ggtattgtta catgttttgg ccaagtatta ttttgtgttt gtatgtcata
     4141 tccccgtaac tcccatttca aacataaagg gaaaccttta ttcagaatgg gggttaaata
     4201 gagttctatt ttgacagatt ctacagaaac agtgaaacaa aatgttatcc ttaaacatta
     4261 aaaagaaaag agctttaaga ctagtcacat atcagtgtat gtgtattaca aaacagctat
     4321 caatttatgg ttaattacat taaatggaat gtctttagtg ttgaaggttt ttttttgttt
     4381 gtttgtttgt tttgtttttt ttgggttttt ttggtaggat aggaaaagac ttctacttaa
     4441 tggaacttca ttcaaaactt acaaacaaga atgtctgttg tgacttcctg agcctgttgt
     4501 gagtactgtg tatgtaacag accaaatatg tccgaaccag taagtgctca ataaattgtc
     4561 agtgttacta ctgttgattg tccttctact gtgttctttt ttatacttta aaattttttt
     4621 acatggaatt tccctcccct actaggtcta tctaggacta ctgcagacag ggatataaag
     4681 tcaggattat agatagctca gaatttgata tatactatgc ttataattgt atttaaaata
     4741 aatagaaaaa tagctacctt gaagtttatg ttttctctgg gtggtgggac taagtgccag
     4801 ttcttctctt atctataatt aacctatgaa caatatgttt cttattaata aaagtttttt
     4861 taagtcc
//
