LOCUS       NM_198024               4298 bp    mRNA    linear   ROD 09-FEB-2025
DEFINITION  Mus musculus RAN binding protein 3-like (Ranbp3l), mRNA.
ACCESSION   NM_198024 XM_127946
VERSION     NM_198024.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4298)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4298)
  AUTHORS   Chernyakov,D., Gross,A., Fischer,A., Bornkessel,N., Schultheiss,C.,
            Gerloff,D. and Edemir,B.
  TITLE     Loss of RANBP3L leads to transformation of renal epithelial cells
            towards a renal clear cell carcinoma like phenotype
  JOURNAL   J Exp Clin Cancer Res 40 (1), 226 (2021)
   PUBMED   34233711
  REMARK    GeneRIF: Loss of RANBP3L leads to transformation of renal
            epithelial cells towards a renal clear cell carcinoma like
            phenotype.
            Publication Status: Online-Only
REFERENCE   3  (bases 1 to 4298)
  AUTHORS   Chen,F., Lin,X., Xu,P., Zhang,Z., Chen,Y., Wang,C., Han,J.,
            Zhao,B., Xiao,M. and Feng,X.H.
  TITLE     Nuclear Export of Smads by RanBP3L Regulates Bone Morphogenetic
            Protein Signaling and Mesenchymal Stem Cell Differentiation
  JOURNAL   Mol Cell Biol 35 (10), 1700-1711 (2015)
   PUBMED   25755279
  REMARK    GeneRIF: Results demonstrate that RanBP3L, as a nuclear exporter
            for BMP-specific Smads, plays a critical role in terminating BMP
            signaling and regulating mesenchymal stem cell differentiation.
            Erratum:[Mol Cell Biol. 2017 Aug 11;37(17):e00287-17. doi:
            10.1128/MCB.00287-17.. PMID: 28801455]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC119167.5, AK132406.1 and BC058706.1.
            
            On May 3, 2013 this sequence version replaced NM_198024.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC058706.1, AK048152.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849385, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-53                AC119167.5         28067-28119         c
            54-170              AK132406.1         2-118
            171-4298            BC058706.1         1-4128
FEATURES             Location/Qualifiers
     source          1..4298
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 3.82 cM"
     gene            1..4298
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /note="RAN binding protein 3-like"
                     /db_xref="GeneID:223332"
                     /db_xref="MGI:MGI:2444654"
     exon            1..568
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             478..1953
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /codon_start=1
                     /product="ran-binding protein 3-like"
                     /protein_id="NP_932141.1"
                     /db_xref="GeneID:223332"
                     /db_xref="MGI:MGI:2444654"
                     /translation="MSTTQRKDDSHLFTSSCTRQLQVQEDRQQQEKYVIAQPIFVFEK
                     GEHNFKRPAEDSLEETAEPEFTGFLRKRVRSSSVTLHTTDPQSQGVATLSQTRLRSSS
                     FTDVPTFPPCRPVRKNNVFMTSRLLQRSDDMNNVEQGPPMRSSEQVLRPAVLQPSQTQ
                     SCQKAGTTFGPGALKSYKTKEKAEHEISEVGSSSSLLSENLPNARSSIQLSTDPCISE
                     APSGCQPKEDKCSFTSCSSDFVFGENMVERVLGTQKLTQPPLQNLSYAKEKTFKSVLK
                     FPNAVSNSDSIENISLVESAAAFSSKPSQKCLLEKIDVITGEETEHNVLKINCKIFVF
                     NKATESWSERGQGILRLNDTAGRECGTLQSRLIMRNQGSLRLVLNSRLWAQMKIQRAS
                     QKNLRITATDLEDDGIKIFLIQASAKDTGFLYAAIHHRLVALRSLAKQGDGGPAESQS
                     DTALPQLNGESCDEDEDEIAQVTKNGSDPSRWSHRQSIVCS"
     exon            569..627
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            628..667
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            668..745
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            746..820
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            821..892
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            893..1035
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1036..1142
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1143..1227
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1228..1330
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1331..1455
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1456..1576
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1577..1719
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1720..1909
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1910..4281
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3471..3476
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /note="hexamer: AGTAAA"
     polyA_site      3500
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
     regulatory      4258..4263
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      4281
                     /gene="Ranbp3l"
                     /gene_synonym="C130037N17Rik"
                     /note="major polyA site"
ORIGIN      
        1 acaggggcga actccaacca ggcagattta atcctgcagc gctttccccc tttgcttgtt
       61 tctctagcag tcctctctac actagaggga ctggacttta cagcagagaa ggaactgaaa
      121 acggctaaaa ttgaacgaga gagctagttt caccgagaga cgtcgtttct ttttgaacat
      181 tctaaaaggg gaaaggtcca gggcgcttta aaataaacta agagttaagt cgtgtttcca
      241 gccaaataag ctggcatctt tgtaggcagg aggtgcgata ctggtaaata tttactgcag
      301 aattcttgac cagtagaaac cctggcatgc ttttcgagga gtaaatgttt tacatgcgag
      361 gcgagatctg cgcgtgcctc tgtgttcttt ccaagtaact tctgaagaca gtttttgatg
      421 tctggctaag acaaactgcg ctagtggtcc ccgagtcaca gccagatcgt tggtaccatg
      481 tctacaacac aaaggaaaga cgacagccac ctgttcacca gttcgtgcac gcgtcagctg
      541 caggtgcagg aggatcggca acagcaagaa aaatatgtca ttgctcagcc aatatttgtt
      601 tttgagaaag gagaacacaa ttttaagaga cctgcagaag acagcctgga agaaacggca
      661 gagcctgaat tcactggttt cttgagaaag cgtgtaaggt cttcatctgt tacgcttcat
      721 actacagatc ctcagtctca aggagtggca actttgtctc aaacgcgtct gaggtcctcg
      781 tcattcactg atgtcccgac cttccctcca tgcaggccag tgaggaaaaa caatgttttt
      841 atgacatcac gtctgctgca aaggagtgat gacatgaaca acgtagagca aggacccccc
      901 atgagatctt ctgaacaggt tctaagaccc gctgttctgc agccgtctca aactcagagt
      961 tgtcagaaag caggcacaac atttgggccc ggtgcattga aatcctacaa aactaaggaa
     1021 aaggccgagc acgagatttc tgaagttgga agttcctcta gtttactaag tgaaaattta
     1081 ccaaatgcca gaagctcaat ccagctgtct actgatccat gcatctcaga ggcaccatcg
     1141 ggatgccaac caaaggaaga taagtgttct tttacaagct gcagttctga cttcgttttt
     1201 ggagaaaaca tggtagaaag agttttgggc actcaaaaac ttactcagcc tccacttcaa
     1261 aatctttcat atgccaagga aaaaacattc aaatctgttc tgaaattccc taatgctgtt
     1321 tcaaattcag actctattga aaacatatcc ctagtcgaat cagctgctgc tttttcctcc
     1381 aaaccatcac aaaaatgctt gcttgagaag attgatgtta taacaggaga agaaactgaa
     1441 cataatgtgt taaagatcaa ctgcaagatc tttgtattca acaaagccac agaatcctgg
     1501 agtgaaagag gccaagggat tttgcgactg aacgacacgg ccggccgaga gtgtggaaca
     1561 ctgcagtcaa gactaatcat gcgcaaccaa ggcagtctga ggctggtcct caacagcaga
     1621 ctctgggctc agatgaagat tcaaagagca agtcagaaaa atttgcgaat aactgcgact
     1681 gatttagaag acgatggtat aaaaatattt ttaattcagg ctagtgccaa agatacaggc
     1741 tttctgtatg cagcaatcca ccaccgtctg gtcgcgcttc gaagcctcgc taagcagggt
     1801 gacggtggtc cagccgaaag ccagtccgat acagccctcc ctcagctcaa tggcgagagc
     1861 tgtgacgagg atgaggatga gatcgcacaa gtcactaaaa atggatcaga tccttcaagg
     1921 tggagccaca gacagtcaat tgtctgttca taaaccctct ctgctataaa catgacatct
     1981 acagaaagag tggccactct attgaaaggc aagaccatcc taactgagaa gactctactc
     2041 attcatacct taaagagttt ttttaattaa agaaacaaac acaatttatt gtaattaaaa
     2101 gttttaagtt ttcattattg tggacagaat ttaagaaatg gccttcagaa tttatccttt
     2161 tgtggattac tctagaataa gatttgataa ctaatttggt ctattcatta cactgacaga
     2221 tatattaatt aaaagtacaa attgtcatct ttgataaatc tttgatacat acctaaagta
     2281 tttattttaa gtcacatatt gtctggctat aaaatataga atatagaata tatagaatat
     2341 agaatatttt actaaattta cagtaatctc tttggaaaat accataactg caaggcattt
     2401 tattaaacca tgtgtatatt ctgagaaatt tgtattttca cttacacttt gaatttccta
     2461 atacacacaa gaattctttt acaagagtgc ccattcatgg acttttatcc attgcatctt
     2521 atgtatttga ctcaaagtca gctcacaaga gttgatgaat aattgaacaa aatgtattac
     2581 ctatgtgtca aaaaatgtac agaaaccaaa tatcaatgtg ctttatttag gtggtcgtct
     2641 taatagtcta gtaggtgtaa ggctatggta gaagccattt tttaacaaat gtctcctata
     2701 tatatgggca aatgagtatc tcaaattcca tcattatgat atagtaattt taataattgt
     2761 tagcagatgc tttatacctt tttgatattt cagagacatt ttatgaatca tgcatgaaaa
     2821 tccatgtcag aattgagggc aatattttat tttattagta gccccaaaca atctcattac
     2881 aggataaaga ttcaaggtca taaatgattt tggatgtgtt ctgaatcttg atatgcttgt
     2941 aataagcctg agactttaca aactgttaca ctgaggaaaa tattctttga aagcatacat
     3001 atgaatatat attttaaaag ttgacaatgc tttattgcct ccatacaaca gaagtatccg
     3061 catgtgccta tctattaatc aaatctcagc ttaaatctga aagtctggca tacaatcgct
     3121 gagtaaggtc ttttagagta ggatttaatt aatatgttca gaagaagata gaaaaggtat
     3181 cagaagaaga gagaaagact tgccatcagg aaaaggagta aacgcagatg attaagatga
     3241 tctcccctcc ctcccactct gtggcagaat acaaatcata ggatgagtct aacaagaagc
     3301 atcatcagag aggcatttga agaagatatg aaagtactgc ttcacccata ggatgttagc
     3361 tttgagggaa cattctgatt gtatggtgat ttttaaagtg aagcagagaa cagaggtctt
     3421 ctctatccct tggcatgttt cttcttggtc ccatactgga aatgaaatga agtaaaaaaa
     3481 aaaaaattgt gtgttccaaa tactttaata gaagttgagt cgactgattt tctttggtct
     3541 tctgtacaga tggcaaatga gaaagagact tacttgtaac ccatacagaa atgccaggag
     3601 gtgcccaagt aggttagaat gtcagcatgg cagagagaca gtgtcaacct cagggtcatg
     3661 aaacggtgac aaggagcaga gacatgacat acattgcaag agtcctccat cttttttttt
     3721 tttgttgttg ttgtttgttt gtttgttttg tttttttttt cgagacaggg tttctctgtg
     3781 tagccttggc tgtcctggaa ctcactttgt agaccaggct ggcctcaaac tcagaaatct
     3841 gcctgcctct gcctctgcct cccgagtgct gggattaaag gtgtgtgcca ccacgcccgg
     3901 ctgagtcctc catcttgatt aggagaaaca tttcctagat tttctttatc ttgtattttc
     3961 atctagcctc ctcctgcccc cactttttgg gtcttctaca ctctttgtct cctttcaatg
     4021 tgaagcaatc aactatacaa taatattcat tttcataagt tattcagaca ggtgagtgca
     4081 aatcttacat tctggatttc catataagct attttttatt aaaatctgat aaactgattt
     4141 ccaaatttat tacatatgta tctaaattta tattgaatta tatatcttat ataaagataa
     4201 tctaaatatt gtctttcaat agtatttact ctaattgttt agcataattg atgaatcatt
     4261 aaaacatttc ctgctacaaa aaaaaaaaaa aaaaaaaa
//
