LOCUS       NM_027335               2822 bp    mRNA    linear   ROD 30-JUL-2024
DEFINITION  Mus musculus Q-nucleotide N-glycosylase 1 (Qng1), mRNA.
ACCESSION   NM_027335
VERSION     NM_027335.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2822)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC154437.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK052253.1, SRR7974084.13966.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-402               AC154437.2         126037-126438       c
            403-662             AC154437.2         125363-125622       c
            663-858             AC154437.2         123621-123816       c
            859-2822            AC154437.2         121259-123222       c
FEATURES             Location/Qualifiers
     source          1..2822
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 31.04 cM"
     gene            1..2822
                     /gene="Qng1"
                     /gene_synonym="2210016F16Rik"
                     /note="Q-nucleotide N-glycosylase 1"
                     /db_xref="GeneID:70153"
                     /db_xref="MGI:MGI:1917403"
     exon            1..402
                     /gene="Qng1"
                     /gene_synonym="2210016F16Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             72..1088
                     /gene="Qng1"
                     /gene_synonym="2210016F16Rik"
                     /note="queuosine-nucleotide N-glycosylase/hydrolase;
                     queuosine salvage protein"
                     /codon_start=1
                     /product="queuosine 5'-phosphate N-glycosylase/hydrolase"
                     /protein_id="NP_081611.1"
                     /db_xref="CCDS:CCDS49282.1"
                     /db_xref="GeneID:70153"
                     /db_xref="MGI:MGI:1917403"
                     /translation="MGPPLSPRESARFVAENSRDVLVDHEGVRRAAELLLPAAAAWRV
                     EQWKSLHELNPRGADEAALGWVFLVDSLNFSFWAEREDSKCAVRYGGTPYTGYWALCA
                     AVNRALDQGIPITSASYYATVSLEQVRDIFRSDTAVPMPLMEERHRILNETGKILLEK
                     FGGSFLNCVQKSGRSAQKLMQLIVENFPSYRDEAEFEGKRIAFYKRAQILVADTWSVL
                     EGKGDGCFEDISSITMFADYRLPQILVYLGALKYSDELLKKLLKGEMLLNGDKQEVEI
                     RGCSIWCVELIRDRLLELLEKGENSPVEINSVLLDYHLWDYAREHREDMKGVPFHRTR
                     CIYY"
     exon            403..662
                     /gene="Qng1"
                     /gene_synonym="2210016F16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            663..858
                     /gene="Qng1"
                     /gene_synonym="2210016F16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            859..2822
                     /gene="Qng1"
                     /gene_synonym="2210016F16Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1163..1168
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Qng1"
                     /gene_synonym="2210016F16Rik"
                     /note="hexamer: TATAAA"
     polyA_site      1189
                     /gene="Qng1"
                     /gene_synonym="2210016F16Rik"
                     /note="major polyA site"
     polyA_site      1426
                     /gene="Qng1"
                     /gene_synonym="2210016F16Rik"
     regulatory      1607..1612
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Qng1"
                     /gene_synonym="2210016F16Rik"
                     /note="hexamer: AATAAT"
     polyA_site      1643
                     /gene="Qng1"
                     /gene_synonym="2210016F16Rik"
     polyA_site      1907
                     /gene="Qng1"
                     /gene_synonym="2210016F16Rik"
ORIGIN      
        1 ggacctcaga cccggaagtg ggcgcaagtg cttggccctg gcggaggccg aggctccggg
       61 ttcgaaacag catggggcca ccgctttcgc cgcgcgagtc ggcgaggttc gtggccgaga
      121 acagtcgcga cgtgctcgtg gaccacgagg gcgtgcgcag ggcggccgag ctgctgctgc
      181 ccgcggccgc ggcgtggcgc gtggagcagt ggaagtccct gcacgagctc aacccgcgcg
      241 gggcggacga ggctgcgctc ggctgggtgt tcctggtgga ctcgctcaac ttctccttct
      301 gggccgagcg ggaggacagc aagtgtgcgg tgcgctacgg cgggacgccc tacactggct
      361 actgggccct gtgcgccgcc gtcaaccgcg cgctcgacca agggataccg ataaccagcg
      421 cctcctacta cgccacagtg agcctcgagc aggtgcggga tatatttcgt tcagacacag
      481 ctgtgcccat gcctttaatg gaagagagac atcggattct caatgaaact gggaaaatcc
      541 tactggagaa gtttggaggc tcttttctta actgtgtcca aaaaagtggc agaagtgcgc
      601 agaagttaat gcagctgatt gttgagaact tcccttctta cagggacgag gcagagtttg
      661 aggggaaaag gatcgccttt tacaaacgag cacagatcct cgtggcggac acgtggagtg
      721 tgctggaggg caagggagat ggctgcttcg aggacatctc cagcatcacc atgtttgctg
      781 actacaggct gcctcagatt ctcgtgtacc ttggagccct gaagtactca gatgagctac
      841 taaagaagct cctcaaagga gagatgctct tgaatggaga taaacaggaa gtggaaatta
      901 gaggttgctc catttggtgt gtcgagctga tccgggaccg tcttctggag cttcttgaaa
      961 agggtgaaaa ctctcctgtt gagatcaact ctgttcttct ggactatcac ctgtgggact
     1021 atgcccgaga gcacagggaa gacatgaagg gagtcccttt tcatcgcaca cgctgcatct
     1081 actactgacc ctgagcatag tggctccagt tgaaaccctt gcaactttag atcctacagt
     1141 cacttcacag tttctgattt gctataaaga taaaaattac gctgcctgat ggtggtgcac
     1201 gcctttagtc ccagcactcg ggaggcagag gctggtggac ctctgtgagt tcagggagag
     1261 cctggtctac agagtgaggg cagccagggc tacacagagg ggaaaaggaa aaagataggt
     1321 agaagataga aattacagga atgggcaatt gtctgtccag ttgccattca ttttttcccc
     1381 ttggcataga aatgtgcgtt cctataatca tactgcgtat ccttcagcga tcatgtccat
     1441 gtcttcagtt ggtagttttt ctccactggt aatcttagtt gctctcttcc ttcttttcct
     1501 tttttttttt agtggtcctg aggattaagc ctatgacctt gtgtatgtta ggcaagtgct
     1561 ctaccactgg gtcacactcc cagctcagtg attttctata tgctacaata atttaatatg
     1621 aaatagaggt agtccttgat gtatggacgg ttgccaactg tgaacacttg gcatggtggc
     1681 gcataccacg tgcctatgga ggctatgtaa tctgggtact cagaagatgg aagctggaca
     1741 gtcatgagtt ctaggccgtc ctgacgactc ggaaagcaga aataacgaga ccttcaccag
     1801 tacagagcat ttgctgctct ctggtggagg gcatgagttt ggttcccagc acgcacgttc
     1861 actgtcgcta ccgtctccaa ccagcagaaa agaagcgatg aaaccgatgt ccttctcaag
     1921 gcagtttatt caggaactta acaatgtgca ggaaaaagaa tgctccgacc tctctcggcc
     1981 atcccccttt atcccctctt gtccactccc catcacccca gtccatgtag gcacagttca
     2041 ttggctcagg actacattcg tcacatcatc caatcttatg tcatggtgca tctgtgcaat
     2101 gcacctcaag gtacgtggct atcttgaggg atatgaggaa gtcaggtgcc agtcataaga
     2161 cttggcagca gtcccaggtg ccatcttggg gccacggcca cacctgctcc ttacatctcc
     2221 cccttattct ttaaattggc agagagaatg cctgtcttag gttgccccct gcaacaatgc
     2281 tccttaccca tcactgggag acagacagca gtggtctgat ccctgtctta ggttggtaac
     2341 atgtccaggg agtcttacct gtcattgact acttctctag catgccaagc cacacttgag
     2401 gagattgtca catctccaca gctgcaaagg cttgtatcaa cagagcttga gccctgcaat
     2461 ggcgatgttg catgcggcag atgcaccaaa agaccaggac actgatgagc acgtagcaca
     2521 gtgccaattt acaatactgg cccattcctt taggtgtgac atagcagtgg caatccaatt
     2581 tgcaagtcct tcagccatgg atacatccac caaagtggaa ttaatatgga ctatcccaaa
     2641 atctcttttg ggtctaaaca aggtcataac cgaaggggtc tgcacaggcc atggtaacaa
     2701 tctaggtgtt ctggttacaa tagctaaaga aaacatagaa gcattccaac caacagatac
     2761 tataaaaaca gctatcctcc ttatattcta caacatcatc aaaataacta ccattataaa
     2821 ct
//
