LOCUS       XM_030249598            5437 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus quaking, KH domain containing RNA binding
            (Qki), transcript variant X6, mRNA.
ACCESSION   XM_030249598
VERSION     XM_030249598.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000083.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030249598.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5437
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="17"
     gene            1..5437
                     /gene="Qki"
                     /gene_synonym="1110003F05Rik; 1500005P18; l(17)-1Wis;
                     l17Wis1; Qk"
                     /note="quaking, KH domain containing RNA binding; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 20 ESTs, 11214 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 48 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:19317"
                     /db_xref="MGI:MGI:97837"
     CDS             512..1447
                     /gene="Qki"
                     /gene_synonym="1110003F05Rik; 1500005P18; l(17)-1Wis;
                     l17Wis1; Qk"
                     /codon_start=1
                     /product="KH domain-containing RNA-binding protein QKI
                     isoform X2"
                     /protein_id="XP_030105458.1"
                     /db_xref="GeneID:19317"
                     /db_xref="MGI:MGI:97837"
                     /translation="MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERL
                     LDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRI
                     LGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDA
                     QNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPTAQAAP
                     RIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLI
                     YTPYEYPYTLAPATSILEYPIEPSGVLGMAFPTKG"
ORIGIN      
        1 ggcggcgccg cctgaactga ggcgaactcc gccgccaagt gagtgaggag gaggagagcc
       61 gcggaggaag aggaggagcg cagtcggagc gcggcggcgg cggcggcggc ggtaacgcgg
      121 agcgccgcgg cggacagcac cgcagactcg cgagctccgg cgcaggcggc gcgaccggcc
      181 gacgagcggc cccccggctc ctcgcggcgc agcggccccg cgccgcgctc ggcccgagac
      241 ccgcctctgc cgccggcctc gcgaggggag ccgcgccggg cggccgagga gcggcggccg
      301 cggcgcgtcg ggccgggcga aagtgcctgc ggggggcggg cgggcgcgcg gagccggccg
      361 ccccggggct cggcgcggga gccggagcgg gagccggcgc ggagcgggac gccgcgtccc
      421 gagcggccgg cggccggagc tcgcccccgc ccctccctcc tctcctccgg cggcggcggc
      481 ggcgggcgga gtgagctgcg gagcctggaa tatggtcggg gaaatggaaa cgaaggagaa
      541 gccgaagccc accccagatt atttgatgca gctgatgaac gacaagaagc tcatgagcag
      601 cctgcccaac ttctgcggga tcttcaacca cctcgagcgg ctgctggacg aagaaattag
      661 cagagtacgg aaagacatgt acaatgacac gttaaatggc agtacagaga aaagaagtgc
      721 agaattgcct gacgcggtgg gacccattgt tcagttacaa gagaaacttt atgtgcctgt
      781 aaaagaatac cctgatttta attttgttgg gagaatcctt ggacctagag gacttacagc
      841 taaacaactt gaagcagaaa cgggatgtaa aataatggtc cgaggcaaag gctcaatgag
      901 ggataaaaag aaggaggagc aaaatagagg caagcccaat tgggagcatc taaatgaaga
      961 cttacatgta ctaatcactg tggaagatgc tcagaacaga gcagaaatca agctgaagag
     1021 agcggttgaa gaagtgaaga agttactggt acctgcggct gaaggtgaag acagcctgaa
     1081 gaagatgcag ctgatggagc ttgcaattct gaatggcacc tacagagacg ccaacattaa
     1141 atcaccaact gcccaggctg ctccaaggat catcactggg cctgcgcctg tcctcccacc
     1201 agctgctctg cgtacaccta cgccagctgg ccctaccata atgcctttga tcagacaaat
     1261 acagaccgct gtcatgccaa acggaactcc tcacccaact gctgcaatag tccctccagg
     1321 gcctgaagct gggttaatct acacacccta tgaatacccc tacacattgg caccagctac
     1381 atcaatcctt gagtacccta ttgaacccag tggtgtgtta ggtatggctt tcccaacgaa
     1441 aggctaagaa ttcaagaacg gtcttaaccg aaccctcatc agatctgaat ttaacaaatg
     1501 cttagtctca gcagcctccg ggaaaaacct tagcctagca gtcagtgact tacttgcact
     1561 ttttgcacat agatataaag taaaatgata ctattaattt ggattagtct gtaatactgc
     1621 aaagcaacag taatttataa aggagtgtat agaagtaaac tgactgctaa gtgtactgta
     1681 ctgtttgctt tactaatcac ctaattcatt gcagttcata cttattgact caaaagttta
     1741 aatccacaat ctgtaggctt taattaagag ttgcttttta aacctttttt aagtgataaa
     1801 ctctgaaagt taaggttagc aaaataattg tcagtattaa atgtggcatt atttaagtag
     1861 tcctgctgca agaaaggcac ttcagtgaat atgtgactag taaagctcag acacgtctgg
     1921 ttctaataga gctcgtgaga tactgtgact tggggactgt caatgaagag gtgaagtagg
     1981 tagaaggcca acctgtttga aatgaatgca atattgatag atacatgaca tactacagtt
     2041 gattttaaaa ctactgtgcc ttaacatgtt tcttaagctt ttgtagtaag tgaacctttg
     2101 agatccattt tgataaacct gctgtcaatg tttcccttat gtatgttttc taactttgtc
     2161 ttggtaattg caatttaact aggtgcggtg gctactaaag ttcgaaggca cgatatgcgt
     2221 gtccatcctt accaaaggat tgtgaccgca gaccgaggtt agtttagttc tgcagttctt
     2281 gtttataagc aatgtgctgg gtgtccaaaa agtttgcaac accagacctg atggaaaaat
     2341 gtaactgtct acctgcacac cattttcttt tctttttccc tttctaaatt taataattga
     2401 ttgatttaag gttggtttgg ttttgtggtt ttgtttttgg tttgggtttt cacccctccc
     2461 ctttacattt taatttatta aatcttctat tactttgtcc taagatttat tccagctaaa
     2521 acataaatta gtctatttgg ggagctatta aatttttaca ttatcatagc aatgtttagt
     2581 aataattgtt gctaaatttt tccctttaat tattctgaat atttcagttg gtactgcaaa
     2641 atgaattgag cagatgatgt ttttatgaga gaagtaaaaa aaaaaaattt tgcttccatg
     2701 taattttgga gaaaactgaa gatttattat ccatttttct atattataaa acattgagcc
     2761 actatataaa tatgagggta tatgtgtcaa gaacatacct aaaatcaaca gtcaggactg
     2821 tgaagataat tttaatctaa gtggatactt tatgaataga aaacaagttc cctcttactc
     2881 tattttctgg ccaaaacgga tgctttgagt tttgtcattt gctgctaaat tacagtacct
     2941 gaacgttaac tgtcctgcag ttctgtggta tgcgaggtcc agctccttgg atatcctttt
     3001 ttactaacct gtgactggaa acaagtcttc atttttctca ctttcatatt tgtaacttgt
     3061 gccctatata tgcccttgga cccattttta aattatttat gcttatttga gtagtagtag
     3121 ttttgtttgg gttttttttt tttgttttgt tttgtttttg tttttttttt ttttgttttg
     3181 acttttttgt gtgattcttt tgtgttttgt ttttaattga aagattggaa tcccaagcat
     3241 agtagaaaag gagctagctc acttgacatg gttactctac tcttgaataa ccactataaa
     3301 tacggcacac agttgccttg tgtattagaa ataaaataac cttccaaaga catcagtgat
     3361 acttatttac tatcacacta aaatagagtc ctgaaaactt tacctaacat atatttttgt
     3421 agtggttttt cattgaacaa aatctggtgg catatgcata acaatactac tacatgcagt
     3481 tgtgccaagt gtgagcatat caaccattgt atcagagtcg catagagatg aggaagttag
     3541 atgggaaagg ttacttcaga tgtgggcagt ctcatagata ctttgaagct gcatcatact
     3601 gcaaaagtct aacataatta ttttacagag tgttttgatt ttgaagtaat ttttccccct
     3661 ctttggtttt tctttccccg tgttcctttt aaattttttc actaacacaa taatcctttc
     3721 tcactttgta ctccagagcc ttcagatagt tgagaatatt agactaagat cttactgtat
     3781 ttggaaaatg acaacacatt ccatgcatgg ctcatctgga gctgtgttta ttttgattag
     3841 ttctgtttgt gttcaaaatg cagtgtcagc aaaccaaaac ggtttttatc ccccctgctc
     3901 catctccaac ttttcctttc ttctagagat agatcactta ggaacacgat caccacatgt
     3961 actcactggg tccaagggag aggaccgaag cccttgactt acattatttt atgatactac
     4021 tgtttctctc tctctctctc tctctctctc tctctctttc tctctctctc tctctctctc
     4081 atcttttgag aagattatta ttagcattca tttgatgcaa ggaagcagcc cgaggacata
     4141 taaccatgta actgtctgta tgtaagcact tagagtatct agttgcttac taaaaacaaa
     4201 cccacttcca tagttatttc acaattggtt tgaaacttaa agaccaactg actttatagt
     4261 tgtaacgaac tatacgtgat tttgcacagt taacattacc tgtgtgtact gtaggagtcc
     4321 aggacatggc agaggatgta ttttagatgt actggatatg ataatgtact ttgttaagta
     4381 atccacactc aaatataatc agaaattatc taagtaatga tttgaccaaa acattactta
     4441 cacaaattta agactatggg acaaccgttt ttgttttaaa taaaagtctg cttcctttta
     4501 agaaattcag ggaagatttg attatattga agatacaata tttttgtagt atttataaac
     4561 tgtcctaatt gatagactat agaaaccatt tttgtcatac aaaggtaaat aggtctatta
     4621 tatagaacat ttaaaccctg tgaacatgac acctactagg tttgatttat gaagtggcat
     4681 agactctaac cttgcactga gcatcttttc attcacatct ctcctgcctt tgtctcaatg
     4741 gcaacagtac agaaaattct gtcaaacctc agaatatagt agaaataatt aagctgttga
     4801 atgagtctta aaaattatac tactgttaag tggaccaagt ttgatgaagt agaatgtgag
     4861 aggttgatta aagaaggagc tactcaagga ctttggagtg ataacttttc cacttgagaa
     4921 ctactttatg ttttactgta attttttaaa tttttttttg ttcttttttg ttactttgca
     4981 aaagaaaata gtatttacag gtggcttctt ttaaaatata aaaatataaa gcaggaatgt
     5041 atatgaaatg tcagatttta ttgtatttgc agagtattag ctttgaaatt gaataaagaa
     5101 agctgtttgt agttttaaaa atgccttctt ggtatcagtt agaaatttct tctatttttt
     5161 atgtacttag agttctttga ggtatagagt tttaaatggc aggattttac agtgtttaca
     5221 tgcaagtgca ttttataagt gttctatatg tgtaaattag tattttcaac tggaaaatgt
     5281 tggctggtgc aaaaggcctg gccttttttc tggttcccat gatgttgcct acactgctag
     5341 actacagtat tgctttgtat catgaggcca agaaattcca tgttgtttgt aaatagaata
     5401 attgaaaaag caataaacat ttattgaaca aaagaaa
//
