LOCUS       XM_006523300            4574 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus quaking, KH domain containing RNA binding
            (Qki), transcript variant X1, mRNA.
ACCESSION   XM_006523300
VERSION     XM_006523300.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000083.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006523300.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4574
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="17"
     gene            1..4574
                     /gene="Qki"
                     /gene_synonym="1110003F05Rik; 1500005P18; l(17)-1Wis;
                     l17Wis1; Qk"
                     /note="quaking, KH domain containing RNA binding; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 10 ESTs, 4243 long SRA reads, 3 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 49 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:19317"
                     /db_xref="MGI:MGI:97837"
     CDS             512..1513
                     /gene="Qki"
                     /gene_synonym="1110003F05Rik; 1500005P18; l(17)-1Wis;
                     l17Wis1; Qk"
                     /codon_start=1
                     /product="KH domain-containing RNA-binding protein QKI
                     isoform X1"
                     /protein_id="XP_006523363.1"
                     /db_xref="GeneID:19317"
                     /db_xref="MGI:MGI:97837"
                     /translation="MVGEMETKEKPKPTPDYLMQLMNDKKLMSSLPNFCGIFNHLERL
                     LDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRI
                     LGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDA
                     QNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPTAQAAP
                     RIITGPAPVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLI
                     YTPYEYPYTLAPATSILEYPIEPSGVLGAVATKVRRHDMRVHPYQRIVTADRAATGN"
ORIGIN      
        1 ggcggcgccg cctgaactga ggcgaactcc gccgccaagt gagtgaggag gaggagagcc
       61 gcggaggaag aggaggagcg cagtcggagc gcggcggcgg cggcggcggc ggtaacgcgg
      121 agcgccgcgg cggacagcac cgcagactcg cgagctccgg cgcaggcggc gcgaccggcc
      181 gacgagcggc cccccggctc ctcgcggcgc agcggccccg cgccgcgctc ggcccgagac
      241 ccgcctctgc cgccggcctc gcgaggggag ccgcgccggg cggccgagga gcggcggccg
      301 cggcgcgtcg ggccgggcga aagtgcctgc ggggggcggg cgggcgcgcg gagccggccg
      361 ccccggggct cggcgcggga gccggagcgg gagccggcgc ggagcgggac gccgcgtccc
      421 gagcggccgg cggccggagc tcgcccccgc ccctccctcc tctcctccgg cggcggcggc
      481 ggcgggcgga gtgagctgcg gagcctggaa tatggtcggg gaaatggaaa cgaaggagaa
      541 gccgaagccc accccagatt atttgatgca gctgatgaac gacaagaagc tcatgagcag
      601 cctgcccaac ttctgcggga tcttcaacca cctcgagcgg ctgctggacg aagaaattag
      661 cagagtacgg aaagacatgt acaatgacac gttaaatggc agtacagaga aaagaagtgc
      721 agaattgcct gacgcggtgg gacccattgt tcagttacaa gagaaacttt atgtgcctgt
      781 aaaagaatac cctgatttta attttgttgg gagaatcctt ggacctagag gacttacagc
      841 taaacaactt gaagcagaaa cgggatgtaa aataatggtc cgaggcaaag gctcaatgag
      901 ggataaaaag aaggaggagc aaaatagagg caagcccaat tgggagcatc taaatgaaga
      961 cttacatgta ctaatcactg tggaagatgc tcagaacaga gcagaaatca agctgaagag
     1021 agcggttgaa gaagtgaaga agttactggt acctgcggct gaaggtgaag acagcctgaa
     1081 gaagatgcag ctgatggagc ttgcaattct gaatggcacc tacagagacg ccaacattaa
     1141 atcaccaact gcccaggctg ctccaaggat catcactggg cctgcgcctg tcctcccacc
     1201 agctgctctg cgtacaccta cgccagctgg ccctaccata atgcctttga tcagacaaat
     1261 acagaccgct gtcatgccaa acggaactcc tcacccaact gctgcaatag tccctccagg
     1321 gcctgaagct gggttaatct acacacccta tgaatacccc tacacattgg caccagctac
     1381 atcaatcctt gagtacccta ttgaacccag tggtgtgtta ggtgcggtgg ctactaaagt
     1441 tcgaaggcac gatatgcgtg tccatcctta ccaaaggatt gtgaccgcag accgagccgc
     1501 caccggcaac taacctatga ccttctgacc tctgaactct tcacccaatg atgacctgac
     1561 catgcctgcc tgctgatcag ttaactggta atcgcctttg cttgcctgtc gtcagtgcag
     1621 cgagctgagg cacttgtccg ttcgtcttac catctaacca aacaaaagac aaagaaattg
     1681 tcctccaact cagcttttcc ccccctgttt gggtgaaagt ggttctagaa cctgcactga
     1741 atagtagtaa agcaataagg cccgattcat cccacagcac tgatcatctc tcaatgcccc
     1801 accccaagcg aacggtaaga aggcctctct taagaagggg agacagatgg ccctaactac
     1861 tcagtgacag aggcagttac tgtgagagac ttgtaggaat ttttttcttc tcctagcgaa
     1921 gtcaaagctc tctctgaatg tactgtgtga caatgcatca tgcatgaacc ttcggtcagg
     1981 gatgtcgttg gggaagtgac ttcaaaagta ttcaaaattt gacatgctgt ttgtttagtc
     2041 actacagtgc cctcaaaggg cagacattgc agccttttta tattgcctgc caaaatttga
     2101 agtattagaa caaagtgtgc catgagagaa aaacttaaca aggagttttg aaaagaaatg
     2161 caaagaacaa aactacaaca ctatttttta aaaagttgag tatctgagtt aaaatttcca
     2221 aatctttatt ttacaccacc ttaaaaatta tatgagaaca aggtacatgc attatgtgtc
     2281 acattactgg gcaaactgtt caaatatttt ttttaaacct ccctgtatag aaaatatcat
     2341 taaggatgta aaagccatgc ttgcctattt gctgtataca tgtaatgaaa ttgtagataa
     2401 agtgtagtgc attgaaacaa atgaacaaaa aagtagatac ttttactata caagggtgct
     2461 ggtgcagaaa aaaatatata tatttttgga aatgtagcat tttatacttt caagtgttat
     2521 aaaaaaaaag aaaaagaaca aagaaaccct ttatttcatt aaatgatttt ttctggtggt
     2581 tgtcaagaaa caaaagacca aaagagcctt tttgtctttc ttttttattt tttaagtatt
     2641 ggaataagtc taatgaaaaa gaaagtgcct tatttttctt catggtcatt tagtcaagtg
     2701 tcctgtaaga tcagctcctc cctcagaata aagttactgc atgttcctca gtcgcccagt
     2761 atgtgaaagg agatatgaga ggagacaaat gagttgatgg tctaaattat aagatttgtg
     2821 tcacattatc ttgatgccag tttgccaaat ctgatactgt gaaaaaattt gatagctttt
     2881 ctaatgtctg actagtaaat tttaaaatgt cattctttta caaatcataa ttagtacttt
     2941 tggttattac cgtcttcagt gttagcccaa agattctgag gtttagaaaa aaattatgta
     3001 agatctgaac atcagtttgc agacaaaatt aaattagagc tttattttat ttggagaaga
     3061 gggatacaat ggaatttttc cttaccaatt agaaataatt gtaatgccta aaaaactttt
     3121 tcacaaaaat gaatctttga aattttttat tgttgaaaaa gtgttaagta acataaatct
     3181 aatcagatat cttatgtagt ccatctctgc tggctttagt aactgctcct aaacttttta
     3241 actctaaagg agcgtggaaa gcccgcatca cagtgttcag tgactgctct gctccattct
     3301 ttctcctctc cagtttctct cttgaaagtc aaacagtttt gtagttgaag cagtccgtgt
     3361 gcaaagcctg catctaaaca cttgcgttaa taagtcatta accgctcagt accagatgtg
     3421 gcaaatctca agtgattgtg gactcctggc tcatcaactc atgccctctt ccataccctc
     3481 atggcttcac agtcaaggtc agcaggaagc tcattggtca ccttcatggt gacctctcca
     3541 ttattctgtc tcacttggaa ccattttcag tttatttact atgcaataga cagtccttgt
     3601 tttgtactca gctagctttg atttaatgta ccactgcttt gtctttctgt tacacatatg
     3661 gttttgattt atttacaata tatgctgtgc cattttgatt tttattttgg ttggttggtt
     3721 gaataaatat gcgacactca gaacacttga ggtgatagtt ttaaaaaaaa caaacaaaca
     3781 gtaccagtat ttgatccagt ctcatctcag ctgtgttata cctggacaat ttagatgttt
     3841 atcaaaggtc ttttatgggg aagaaagcaa atgtgtaaaa cagtagacgt gtgacgttta
     3901 tgagtaatgc tggctctgaa caaacttttg aaaacttagt tgacagtgtt ttgagtcaac
     3961 tgaaaaaaag catgactttt ggaatctctg aatgccttgg ttctcagtat tatcactcta
     4021 ttgaattttt ttttcttatt aaagtatgta gtttaaaagt aagacttttt tcctgacagt
     4081 attatgtaat ttttagcgtg ggtagatggg agtgtcgctt gtatgttacc atacagctga
     4141 catgtatttt ttgtctattc tttattatct tagtagtttc atgctgtgta tgtaccataa
     4201 ccaacctatt gcctatgaga aacatgtaag ataatgtatt tacagccatt gttacaagtt
     4261 tataatgtat ttttctatct tgttttatat gtatgttata taacattcaa aagaattttt
     4321 ttcttgattg agaaaaggat acaaaatgca aaatccacaa ttttgataac tgaaaattgc
     4381 caattgtttt gcagtacttt attatattgg gtgtcttgtc tttcttgggc ttttagttag
     4441 ctgatgaatg aatacattag acacttctgg gttttagttg ggattttaca tagcttgcat
     4501 tttagttctt tggttctttg ctgtttctat taacccatag cattatttta ataaatgtta
     4561 taataccaac ctac
//
