LOCUS       XM_036156107            1141 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus PYM homolog 1, exon junction complex
            associated factor (Pym1), transcript variant X7, mRNA.
ACCESSION   XM_036156107
VERSION     XM_036156107.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000076.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1141
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="10"
     gene            1..1141
                     /gene="Pym1"
                     /gene_synonym="A030010B05Rik; Pym; Wibg"
                     /note="PYM homolog 1, exon junction complex associated
                     factor; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 EST, 69 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 32 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:78428"
                     /db_xref="MGI:MGI:1925678"
     CDS             101..670
                     /gene="Pym1"
                     /gene_synonym="A030010B05Rik; Pym; Wibg"
                     /codon_start=1
                     /product="partner of Y14 and mago isoform X5"
                     /protein_id="XP_036012000.1"
                     /db_xref="GeneID:78428"
                     /db_xref="MGI:MGI:1925678"
                     /translation="MATPYVTDETGATPQDYYNLDFICDTFPFSYENKYVKFFKSKPE
                     LPPGLSPEATTPVTPSRPEGGETGLSKTAKRNLKRKEKRRQQQEKEAEALSRTLDKVS
                     LGDTAQIPSALQGPQATPLAASDPSDSAATTEKAKKIKNLRKKLRQVEELQQRIQAGE
                     VSQPSREQLEKLARRRVLEEELEDLELGL"
ORIGIN      
        1 agattaaaat ggtggcttgc taggatgagg actccacttc cggcggggag gggggcggga
       61 ccccagcccg ctcacgccgg aagtggttcg ggttctcaag atggcgactc cctatgtaac
      121 tgacgagacc ggcgctacac ctcaggatta ctacaacctg gacttcatct gtgacacatt
      181 tcctttcagc tatgaaaaca agtatgtgaa gtttttcaag agtaaaccag aacttccccc
      241 agggctgagc cctgaggcca ccacaccggt caccccatcc agacctgaag gtggtgagac
      301 aggcctctcc aagacagcca aacgaaacct gaagcggaag gagaagaggc ggcagcaaca
      361 ggagaaagaa gcagaggcct tgagcaggac tcttgataag gtgtctctgg gagacacagc
      421 ccagatacct agtgctctcc aaggccccca ggccacgcct ctagctgcct ctgatccatc
      481 cgactctgct gccaccacag agaaagccaa gaagatcaag aacctgagga agaagcttcg
      541 gcaggtggag gagctgcagc aacgcatcca ggccggggag gtcagccagc ccagcagaga
      601 acagctggag aagctggctc gacggagggt tctggaggag gagctggagg acttggagtt
      661 gggcctgtga ggcttcagga gtaggggagt ggactgcaga acaaaccatg gggtgctctg
      721 gggtccaggg agtgtgggcc gcagcagtca ggaggggtac ccccatactg actcacctcc
      781 acctcctgtg gcccgactcc gtcctccaga gcctaggctc tctttcatcc cttccacttc
      841 ttctcagctc ctgtttttgg actttcccct tccatcccag tgttcacaat ctgagtgccg
      901 acctgaggta cctctgctgc tgatctgggt gtcttgttga aaaggaaacc gggggggtgg
      961 gagtctgtta gcgatctgag gctgagggta tagcagtacc catgttttgg agtcttagtt
     1021 cctgttcaca gtgtttatga attacttccc tgaccatccc gatttccccc caccccaccc
     1081 cccacgcccc ttaatttttt tttttttttt ttttaaagaa aagaataaat tgaagtagat
     1141 g
//
