LOCUS       XM_030245394             931 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus PYM homolog 1, exon junction complex
            associated factor (Pym1), transcript variant X8, mRNA.
ACCESSION   XM_030245394
VERSION     XM_030245394.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000076.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="10"
     gene            1..931
                     /gene="Pym1"
                     /gene_synonym="A030010B05Rik; Pym; Wibg"
                     /note="PYM homolog 1, exon junction complex associated
                     factor; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 123 long SRA reads, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 49 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:78428"
                     /db_xref="MGI:MGI:1925678"
     CDS             101..376
                     /gene="Pym1"
                     /gene_synonym="A030010B05Rik; Pym; Wibg"
                     /codon_start=1
                     /product="partner of Y14 and mago isoform X6"
                     /protein_id="XP_030101254.1"
                     /db_xref="GeneID:78428"
                     /db_xref="MGI:MGI:1925678"
                     /translation="MATPYVTDETGGKYIASTQRPDGTWRKQRRVKEGYVPQEEVPVC
                     VVRLNKGFLMGSYTSIAYYAVEFRDESSGPERNGRRDNGLGRGRSWA"
ORIGIN      
        1 agattaaaat ggtggcttgc taggatgagg actccacttc cggcggggag gggggcggga
       61 ccccagcccg ctcacgccgg aagtggttcg ggttctcaag atggcgactc cctatgtaac
      121 tgacgagacc ggcggcaagt acattgcctc aacacagaga cccgacggga cgtggcgaaa
      181 gcagcggagg gtcaaagaag gatacgtgcc ccaagaggag gtcccagtgt gcgtggttag
      241 gcttaacaag gggtttttaa tgggttccta cacaagtata gcatattatg ccgtggagtt
      301 cagggatgaa tcgtctgggc ccgaaagaaa tggaaggagg gacaacggtc tcgggagagg
      361 aaggagctgg gcttgagggc tatgaaaaca agtatgtgaa gtttttcaag agtaaaccag
      421 aacttccccc agggctgagc cctgaggcca ccacaccggt caccccatcc agacctgaag
      481 gtggtgagac aggcctctcc aagacagcca aacgaaacct gaagcggaag gagaagaggc
      541 ggcagcaaca ggagaaagaa gcagaggcct tgagcaggac tcttgataag gtgtctctgg
      601 gagacacagc ccagatacct agtgctctcc aaggccccca ggccacgcct ctagctgcct
      661 ctgatccatc cgactctgct gccaccacag agaaagccaa gaagatcaag aacctgagga
      721 agaagcttcg gcaggtggag gagctgcagc aacgcatcca ggccggggag gtcagccagc
      781 ccagcagaga acagctggag aagctggctc gacggagggt tctggaggag gagctggagg
      841 acttggagtt gggcctgtga ggcttcagga gtaggggagt ggactgcaga acaaaccatg
      901 gggtgctctg gggtccaggg agtgtgggcc g
//
