LOCUS       XM_006515206            5990 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus peroxidasin (Pxdn), transcript variant X3,
            mRNA.
ACCESSION   XM_006515206
VERSION     XM_006515206.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000078.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006515206.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5990
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="12"
     gene            1..5990
                     /gene="Pxdn"
                     /gene_synonym="2310075M15Rik; E330004E07; mKIAA0230; VPO1"
                     /note="peroxidasin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 mRNAs, 46 ESTs, 689
                     long SRA reads, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 31 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:69675"
                     /db_xref="MGI:MGI:1916925"
     CDS             1548..3902
                     /gene="Pxdn"
                     /gene_synonym="2310075M15Rik; E330004E07; mKIAA0230; VPO1"
                     /codon_start=1
                     /product="peroxidasin homolog isoform X2"
                     /protein_id="XP_006515269.1"
                     /db_xref="GeneID:69675"
                     /db_xref="MGI:MGI:1916925"
                     /translation="MVDLNGTSYHYNDLVSPQYLSLIANLSGCTAHRRVNNCSDMCFH
                     QKYRTHDGTCNNLQHPMWGASLTAFERLLKAVYENGFNTPRGINSQRQYNGHVLPMPR
                     LVSTTLIGTEVITPDEQFTHMLMQWGQFLDHDLDSTVVALSQARFSDGQHCSSVCSND
                     PPCFSVMIPPNDPRVRSGARCMFFVRSSPVCGSGMTSLLMNSVYPREQINQLTSYIDA
                     SNVYGSTDHEARSIRDLASHRGLLRQGIVQRSGKPLLPFATGPPTECMRDENESPIPC
                     FLAGDHRANEQLGLTSMHTLWFREHNRIAAELLKLNPHWDGDTVYHETRKIVGAEIQH
                     ITYRHWLPKILGEVGMKMLGEYRGYDPSVNAGIFNAFATAAFRFGHTLINPLLYRLDE
                     NFEPIPQGHVPLHKAFFSPFRIVNEGGIDPLLRGLFGVAGKMRIPSQLLNTELTERLF
                     SMAHTVALDLAAINIQRGRDHGIPPYHDYRVYCNLSAAYTFEDLKNEIKSPVIREKLQ
                     RLYGSTLNIDLFPALMVEDLVPGSRLGPTLMCLLSTQFRRLRDGDRLWYENPGVFSPA
                     QLTQLKQTSLARILCDNSDNITRVQQDVFRVAEFPHGYSSCEDIPRVDLRVWQDCCED
                     CRTRGQFNAFSYHFRGRRSLEFSYEDDKPTKRARWRKALSVKHGKHLSNATSATHEHL
                     EGPATNDLKEFVLEMQKIITDLRKQINSLESRLSTTECVDDSGESHGGNTKWKKDPCT
                     VCECKNGQITCFVEACQPAACPQPVKVEGACCPVCLKNTAEEKP"
ORIGIN      
        1 aaaggccccg gattacctca gagccacagg atgcagatgt cacctcaggg aacacagtgt
       61 acttcacctg cagagctgag ggcaacccca aacctgagat catctggctt cgaaacaata
      121 acgagttgag catgaagacg gactctcgct taaacttgct ggacgatggc acgctgatga
      181 ttcagaacac acaggaggcg gatgagggtg tctaccagtg catggcgaaa aatgtggctg
      241 gagaggcgaa aacgcaggag gtgaccctca ggtacttggg gtctccagcc cgacccactt
      301 ttgtaatcca gccgcagaac acagaggtac tggtgggtga gagtgtcact ctggagtgca
      361 gtgccacagg ccaccctctg cctcagatca cctggacaag aggtgaccgc acacccttgc
      421 caattgaccc tcgagtgaat atcactccct ctggaggact gtatatacag aacgtcgccc
      481 agagtgacag cggcgagtac acgtgctttg catccaatag tgtggacagt atccatgcca
      541 cagccttcat cattgtacaa gcccttcctc agttcactgt gaccccacag agccgagtgg
      601 tcattgaagg gcagactgtg gatttccagt gtgcggctaa gggacaccct cagcctgtca
      661 tagcctggac caagggaggg agccagctct cagtggacag gcggcacctg gtgctgtcct
      721 caggaacact caggatttct ggggtggccc tgcatgacca gggccagtat gagtgccagg
      781 ccgtcaatat cattggctcc cagaaggtcg tggcccacct gacagtacag cctagagtca
      841 ccccggtatt tgccagcatt cccagtgaca tgactgtaga ggtgggcacc aacgtgcagc
      901 tgccttgtag ctcccaggga gaaccagagc cagccatcac ctggaacaag gatggtgttc
      961 aggtaacaga aagtggaaaa tttcacatca gccccgaagg attcttgacc atcaatgatg
     1021 ttggcactgc cgatgcaggt cgctatgagt gtgtagctcg gaacacaatt ggatatgcct
     1081 ctgtgagcat ggtactcagt gtgaatgttc ctgatgtaag tcggaatggg gatccctatg
     1141 ttgctacctc tattgttgaa gccattgcaa ctgttgacag agccatcaac tctacaagga
     1201 cacacttgtt tgacaggcgc tggactgtga ttcacgatca aaccattttt agaagactca
     1261 cctcattctt gtggcttgtt agaaacaatt tggccaaaac aaaatgttac tgaggtggcc
     1321 agtggatccc gccatgttgg caattgctac ggactctctg caccttaact gaaatgcgat
     1381 tcctgtgact ctctctcttg acttattaat gccgtcctcg ttctccaaat gacctgctcg
     1441 ctctgttccg gtacccacgg gatccataca cagtgggaca agccagggca ggagagatat
     1501 tcgagcggac cctgcagctg atccaggagc atgttcagca tggcttgatg gtggacttga
     1561 atggaacaag ttaccactac aatgatctgg tgtccccgca gtacctgagc ctcatcgcca
     1621 acctgtcagg ctgcactgca caccgccgcg tgaacaactg ctcagacatg tgcttccacc
     1681 agaagtatag gacgcacgat ggcacgtgca acaatctaca gcacccgatg tggggtgcct
     1741 cactgaccgc ctttgagcgc ctgttgaagg ctgtgtatga gaatgggttc aacacacccc
     1801 ggggcattaa ttcccagcgt cagtacaatg ggcatgtact acccatgccc cgcctggtgt
     1861 ccaccacact gattgggaca gaggtgatca cccccgatga gcagtttaca cacatgctga
     1921 tgcaatgggg ccagttcctt gaccatgacc tagactctac agtggtagcc ctgagccagg
     1981 cccgcttctc tgacggccag cattgcagct ctgtgtgcag caatgaccct ccctgtttct
     2041 cggtcatgat cccccccaat gatccccggg tgcggagtgg cgcccgatgc atgttcttcg
     2101 tgcgatcgag ccccgtgtgt ggcagcggca tgacgtccct gctcatgaac tctgtgtacc
     2161 ctcgagagca gatcaaccag ctcacctcct acatcgatgc ctccaatgtg tacggcagca
     2221 cagaccacga agcccgcagc atccgggacc tggccagcca ccgtggcctg ctgcgtcagg
     2281 gcattgtgca gaggtctggc aagcccctgc ttccctttgc caccgggcca cccactgagt
     2341 gcatgcgcga tgagaacgag agcccgatac catgctttct ggccggcgac caccgtgcca
     2401 acgagcagct tggcctgacc agcatgcata cgctgtggtt ccgggagcac aaccgcattg
     2461 cagcagagct gttgaagcta aacccgcact gggatgggga cactgtctac catgagaccc
     2521 gcaagatagt cggggcagag atacagcaca tcacctaccg gcactggctg cccaagatcc
     2581 tgggggaggt gggcatgaag atgctcggtg agtaccgggg ctacgacccc agtgtcaatg
     2641 ctggcatctt taatgccttt gccactgcag ccttcaggtt cggtcacact ctgatcaacc
     2701 ctctgctcta ccggctggat gagaactttg agcccatccc tcagggccat gtgcccctcc
     2761 acaaagcctt cttctcgccc ttccggattg tcaacgaggg gggcatcgac ccacttctcc
     2821 gagggctgtt tggagtggca gggaagatgc gcattccctc tcaattgctg aacacagagc
     2881 tcacggagag gctgttctcc atggcccaca cagtggccct ggacctggct gccatcaata
     2941 tccagcgagg ccgggaccat ggcatcccac cctaccatga ctacagagtc tactgcaact
     3001 tgtcggctgc ttacaccttt gaggacctga aaaatgagat caagagccct gtgatccggg
     3061 agaaactgca gaggctgtat ggctcgactc tcaacattga tctgttccca gccctcatgg
     3121 tagaagacct agtacctggc agccgcttgg ggcccacact catgtgcctg ctcagcacac
     3181 agttccgacg cctgcgggat ggagacaggt tgtggtatga gaacccaggc gtgttctccc
     3241 ccgcccagct gactcagctc aagcagacgt ccctggcgag gatcctttgt gacaactcag
     3301 acaacatcac ccgtgtgcag caggatgtgt tcagggtggc agagttcccc cacggttata
     3361 gcagctgtga ggacatcccc agggtggacc tgcgagtgtg gcaggactgt tgtgaagatt
     3421 gtaggaccag gggacaattc aatgctttct cctaccattt ccggggaaga cggtctctag
     3481 aatttagcta tgaggacgat aagcccacaa agagagccag gtggcggaaa gcactaagtg
     3541 taaagcatgg caaacatctt agcaatgcca catcagccac ccacgagcac ttggaagggc
     3601 cagcaactaa tgatctcaag gaatttgttc tggaaatgca aaagatcatc acagacctca
     3661 gaaaacagat aaacagcttg gagtctcggc tcagcaccac agaatgtgtg gatgacagcg
     3721 gtgaatctca cggcggcaac acaaagtgga aaaaagaccc atgcacagtt tgtgagtgca
     3781 aaaatggcca gatcacctgc tttgtggaag cttgccagcc tgcagcctgc ccccagcctg
     3841 tgaaagtgga aggcgcttgc tgtcccgtct gcttaaagaa cactgcagag gaaaagcctt
     3901 agtgttcccg agcttagctc ctcgaagctg gtccacagaa tacttgtgag cctagatgac
     3961 aacatgggga gcttcagacc acaggacaag ttgggatctc agacatttca ggacctctgc
     4021 tgtgccatcg cagaagcagc cggggctgct tcacaccctg tgtttgtaga aggaaattga
     4081 gcaggcggga gtgggtgcag gctctggccc tcacttcatg ttagacttct caggtttata
     4141 tttaagtgtt tttaaatgga aaattggtgc tactattaaa tcacacagtt gagacatggg
     4201 tttcgaaatt gcttcggcct gatgatgcca cttctgttta agcgaggcag aaggtctttg
     4261 acaggcttca tttaaacaga agcatttggc aaatggaaca ggatcttata aaataatatc
     4321 ctgggccaaa atccctacag ggatactagg gctttctccc actgctccct catgtctgcc
     4381 atcttcccct tcagggccct tcagcgtcta ataacaatac caacacaaac ctgcaccttg
     4441 cgaccatgtc cacccttcta cacaggactg tcacattatc aagccacagt tagaaataat
     4501 cttgtttcca cttagaaaat gtgtaaatac tgccttgctg taaattgaat gtgaaatcct
     4561 ttggtcctat gccatgttga gtgacccgaa tagccccttg catcggcagg atggtctgca
     4621 gccaccacct gccttggttc ctggccatgg tgtagggagg gtgatggtct gcagccacca
     4681 cctgccttgg ttcctggcca tggtgtaggg agggtgattc actctccagg tcctttgaat
     4741 aggtgacaga caggcagagc ctgaatgtca ggaaattcca ttgtatgaat gctttaaagg
     4801 aaaacgttcc ctatacctca ttatttttta ttgcatgatg ttttataaaa atttgcccat
     4861 tttagatgtt agaaaaatta tttccactat gcaaatttct ttttaattca gtgaaaagca
     4921 actgttatac ctcatagtct cttgttttta attgaccaaa atattccatt ctattctcac
     4981 aaggttctga ggtctctgcc tgaaaaagca agtctcaccc tatagacact gatgtgccca
     5041 gcactacgtg ccagccattg tgggaacaca agagggtcac ctgcccaagg gctagggagg
     5101 aagacctcaa gaacacagag gaggtggaaa aggacaaaat aggtgccatt ttagggagac
     5161 catggtcaga tagggggatg ctcagttcct tgcagcctcg ggcgggctta tgttggcact
     5221 aaggccattg tggagtgtac ttatatgatc cctatgctga taggattacc ttcctagaca
     5281 tagctagacg caaagccaca tgtgtaaggc tgctgagcaa agacagcatc ccagcatggg
     5341 tgtgttcacg gtggattcac cacgttgcat atgtaaagtg gtccccttgg cttacccttc
     5401 actttgctca tgagattcag aagctggtgg tccagcaggg gtgagcattt gtgaaatagt
     5461 aagctgaact tagtggtgag atttcagaac agacttctgt gaagtaagag atgtaaccat
     5521 gcatctaaaa tcagatggcc gtgtaactgc tcgggcatag aaatggtggg agaacctgtc
     5581 ctgggtacct ggcatttcac atgagcccag ggatatgtct tgtgccaagg cacacaagtg
     5641 tccatggact tggacaggtg ccaagggttt ttgtctctgt tcctatgtgg gaggctggct
     5701 gtgatttaca ttaatttctg tatttcaaac gaagatgtct gcagatctcc attttgatgt
     5761 tacagcctca ttgcccaggc agtgggcagt gcccagacac cctttctgac tagccactgc
     5821 attgggcttc tgtgattcaa agtagtgtat atatttattt acttctctga ctgtggccaa
     5881 cagccaaatg ccattttatg ttccttgtat tcagtccatt accaaagagg tgtttgcact
     5941 ttgtaatgat acctttcagt tcaaataaaa ggaccacatc gttaagtgga
//
