LOCUS       NM_011184               2374 bp    mRNA    linear   ROD 20-OCT-2024
DEFINITION  Mus musculus proteasome subunit alpha 3 (Psma3), transcript variant
            1, mRNA.
ACCESSION   NM_011184
VERSION     NM_011184.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2374)
  AUTHORS   Shin,S.W., Vogt,E.J., Jimenez-Movilla,M., Baibakov,B. and Dean,J.
  TITLE     Cytoplasmic cleavage of DPPA3 is required for intracellular
            trafficking and cleavage-stage development in mice
  JOURNAL   Nat Commun 8 (1), 1643 (2017)
   PUBMED   29158485
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2374)
  AUTHORS   Geng,S., White,S.N., Paine,M.L. and Snead,M.L.
  TITLE     Protein Interaction between Ameloblastin and Proteasome Subunit
            alpha Type 3 Can Facilitate Redistribution of Ameloblastin Domains
            within Forming Enamel
  JOURNAL   J Biol Chem 290 (34), 20661-20673 (2015)
   PUBMED   26070558
  REMARK    GeneRIF: Protein interaction between Ambn and Psma3 can facilitate
            redistribution of ameloblastin domains within forming enamel.
REFERENCE   3  (bases 1 to 2374)
  AUTHORS   Sasaki,K., Hamazaki,J., Koike,M., Hirano,Y., Komatsu,M.,
            Uchiyama,Y., Tanaka,K. and Murata,S.
  TITLE     PAC1 gene knockout reveals an essential role of chaperone-mediated
            20S proteasome biogenesis and latent 20S proteasomes in cellular
            homeostasis
  JOURNAL   Mol Cell Biol 30 (15), 3864-3874 (2010)
   PUBMED   20498273
REFERENCE   4  (bases 1 to 2374)
  AUTHORS   Gomes,A.V., Zong,C., Edmondson,R.D., Li,X., Stefani,E., Zhang,J.,
            Jones,R.C., Thyparambil,S., Wang,G.W., Qiao,X., Bardag-Gorce,F. and
            Ping,P.
  TITLE     Mapping the murine cardiac 26S proteasome complexes
  JOURNAL   Circ Res 99 (4), 362-371 (2006)
   PUBMED   16857966
REFERENCE   5  (bases 1 to 2374)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   6  (bases 1 to 2374)
  AUTHORS   Tanida,I., Tanida-Miyake,E., Nishitani,T., Komatsu,M., Yamazaki,H.,
            Ueno,T. and Kominami,E.
  TITLE     Murine Apg12p has a substrate preference for murine Apg7p over
            three Apg8p homologs
  JOURNAL   Biochem Biophys Res Commun 292 (1), 256-262 (2002)
   PUBMED   11890701
REFERENCE   7  (bases 1 to 2374)
  AUTHORS   Gao,Y., Lecker,S., Post,M.J., Hietaranta,A.J., Li,J., Volk,R.,
            Li,M., Sato,K., Saluja,A.K., Steer,M.L., Goldberg,A.L. and
            Simons,M.
  TITLE     Inhibition of ubiquitin-proteasome pathway-mediated I kappa B alpha
            degradation by a naturally occurring antibacterial peptide
  JOURNAL   J Clin Invest 106 (3), 439-448 (2000)
   PUBMED   10930447
REFERENCE   8  (bases 1 to 2374)
  AUTHORS   Elenich,L.A., Nandi,D., Kent,A.E., McCluskey,T.S., Cruz,M.,
            Iyer,M.N., Woodward,E.C., Conn,C.W., Ochoa,A.L., Ginsburg,D.B. and
            Monaco,J.J.
  TITLE     The complete primary structure of mouse 20S proteasomes
  JOURNAL   Immunogenetics 49 (10), 835-842 (1999)
   PUBMED   10436176
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY159585.1, AI303320.1, AK168495.1 and AC132325.4.
            
            On Jul 16, 2015 this sequence version replaced NM_011184.4.
            
            Transcript Variant: This variant (1) represents the longest
            transcript and encodes the longer isoform (a).
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK002877.1, AF055983.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-11                BY159585.1         1-11
            12-96               AI303320.1         11-95
            97-996              AK168495.1         2-901
            997-2374            AC132325.4         116764-118141
FEATURES             Location/Qualifiers
     source          1..2374
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 29.39 cM"
     gene            1..2374
                     /gene="Psma3"
                     /gene_synonym="Lmpc8"
                     /note="proteasome subunit alpha 3"
                     /db_xref="GeneID:19167"
                     /db_xref="MGI:MGI:104883"
     exon            1..145
                     /gene="Psma3"
                     /gene_synonym="Lmpc8"
                     /inference="alignment:Splign:2.1.0"
     exon            146..228
                     /gene="Psma3"
                     /gene_synonym="Lmpc8"
                     /inference="alignment:Splign:2.1.0"
     exon            229..352
                     /gene="Psma3"
                     /gene_synonym="Lmpc8"
                     /inference="alignment:Splign:2.1.0"
     exon            353..454
                     /gene="Psma3"
                     /gene_synonym="Lmpc8"
                     /inference="alignment:Splign:2.1.0"
     exon            455..528
                     /gene="Psma3"
                     /gene_synonym="Lmpc8"
                     /inference="alignment:Splign:2.1.0"
     exon            529..601
                     /gene="Psma3"
                     /gene_synonym="Lmpc8"
                     /inference="alignment:Splign:2.1.0"
     exon            602..667
                     /gene="Psma3"
                     /gene_synonym="Lmpc8"
                     /inference="alignment:Splign:2.1.0"
     exon            668..714
                     /gene="Psma3"
                     /gene_synonym="Lmpc8"
                     /inference="alignment:Splign:2.1.0"
     exon            715..782
                     /gene="Psma3"
                     /gene_synonym="Lmpc8"
                     /inference="alignment:Splign:2.1.0"
     exon            783..847
                     /gene="Psma3"
                     /gene_synonym="Lmpc8"
                     /inference="alignment:Splign:2.1.0"
     exon            848..2374
                     /gene="Psma3"
                     /gene_synonym="Lmpc8"
                     /inference="alignment:Splign:2.1.0"
     regulatory      996..1001
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Psma3"
                     /gene_synonym="Lmpc8"
                     /note="hexamer: TATAAA"
     polyA_site      1014
                     /gene="Psma3"
                     /gene_synonym="Lmpc8"
                     /note="major polyA site"
     regulatory      1512..1517
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Psma3"
                     /gene_synonym="Lmpc8"
                     /note="hexamer: ATTAAA"
     polyA_site      1536
                     /gene="Psma3"
                     /gene_synonym="Lmpc8"
     regulatory      2345..2350
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Psma3"
                     /gene_synonym="Lmpc8"
                     /note="hexamer: AATAAA"
     polyA_site      2374
                     /gene="Psma3"
                     /gene_synonym="Lmpc8"
                     /note="major polyA site"
ORIGIN      
        1 aagaggaaag gctattggtg gagagcgcag ccaatgggcg agcctgttac tagcctgcgc
       61 cgtgtgcggc gtaggagcgg cgcttgaggc ctggaagcgt tccgcggcct gccgggtcag
      121 caccatgagc tccatcggca ctgggtatga cttgtcagcc tctacgttct ctcctgatgg
      181 aagagttttc caagttgaat atgccatgaa ggctgtggaa aacagtagta cagctattgg
      241 gatcagatgt aaagatggtg ttgtgtttgg ggtagaaaaa ctagtccttt ctaaacttta
      301 tgaagaaggc tccaataaac gtctttttaa tgttgatcga catgttggaa tggcagttgc
      361 aggtttgctg gcagatgctc gttcattagc agacatagcg agagaagaag catccaactt
      421 taggtccaac ttcggctata acattcctct aaaacatctt gcagacagag tggccatgta
      481 tgtacacgcc tatacactct acagcgctgt tagacctttt ggctgcagtt tcatgttggg
      541 gtcttacagt gcgaatgatg gtgcacagct ctatatgatc gacccatcag gtgtttcata
      601 tggttactgg ggctgtgcga ttggcaaagc caggcaggct gcaaagacag agatagaaaa
      661 gcttcagatg aaggaaatga cttgccgtga tgtagttaaa gaagttgcaa aaataattta
      721 catagtacac gatgaagtta aggataaagc ttttgaactg gagctcagct gggttggtga
      781 attaactaaa ggaagacatg aaattgttcc caaagacata agagaggaag cagagaaata
      841 tgccaaggaa tctttgaagg aagaagatga atcagatgat gacaatatgt aatattttct
      901 tccccatccg ctggtttaca tttctgtaac agttgcatat ggctagcacc atggactata
      961 tatacccact gaccgatttt cattaaattt tgtcttataa acattgttgg gtaattgaag
     1021 ctatctgtgt aatattaaaa tatagattga tgtttgatta aaaattctta gaactgggcc
     1081 tggagagatg gctcagcagt taagagctgc tcttccaggg gacataggtt caattcccag
     1141 cacctacaat ggcagctcac acctgtctgt aactccagtt ccaggcttct gacacctaca
     1201 aactgaggta catgcaggca aaacaccaat gaatataaaa taaaaataaa tgatatctac
     1261 ttacacatat aataaatgca aaaatacaaa tatgtatata tacagacaca catgtgtata
     1321 tacatttaaa ttcttggtgc tattctcgtg tggtagtaca tgcctttaat cctagtactc
     1381 agaggcaggt ggacctcttg agttcaaggc tagtattcaa aaaaaaaaaa aaaaaaaaaa
     1441 aaagcagtgc ccagagttaa ggccgaaaga ttgagcccac aagttaattt atccattttg
     1501 ttttaactag aattaaaata ataattttta gatttatttt tgtgggtttt tttttttttt
     1561 tttttgcatg tttatattac aatgtccatg cctggtatcc acgaaggtca gaagagcttt
     1621 aatctagaac taaagttatg gatggctgtg aatcatgggt gctcggaact gaacccaggt
     1681 cttgtgcaag agcaacatgt cctcttaacc actgagccgt ctctccagcc ttctttaact
     1741 agaatgatca tattattctg tggttcttgt aataatgttg tgtttaatgt agggacattc
     1801 tgtaaccact actgagaaca gcgagctttt tgtggaaaat gtgacagcat ttatttttca
     1861 gattgcatag atatcttatg actggaaatt atcacctgtc ttagtcaggg tttctattcc
     1921 tgcacaatca tcatgaccaa gaagcaagct ggggaggaaa gggtttattc agcttacact
     1981 ttccattctg ctgttcatca ccaaaggaag tcaggactgg aactcaaaca ggtcagaaag
     2041 caggaactga tgcagaggcc atggagggat gttctttact ggctcgcttc ccctggcttg
     2101 ctcagcttac tttcttacag aacccaggac tactagtcca ggggtggcac cgcccacaag
     2161 ggaccctccc cacttgatca ctaattgaga aaatgcttta cagttgggtc tcaatggagg
     2221 cccttcccta actaagctcc tcctctgtga taactccagc tgtgtcaagt taatacacaa
     2281 accatccagt acagcacttg aaacaaaaac tttaaggtat caaattgagc ttaaatattc
     2341 atgtaataaa atgtttatag tacttctctg ataa
//
