LOCUS       NM_025370               3010 bp    mRNA    linear   ROD 08-JUN-2024
DEFINITION  Mus musculus peroxiredoxin like 2C (Prxl2c), mRNA.
ACCESSION   NM_025370 XM_905467 XM_919352 XM_919357 XM_919377 XM_919387
VERSION     NM_025370.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3010)
  AUTHORS   Gilligan,P., Brenner,S. and Venkatesh,B.
  TITLE     Fugu and human sequence comparison identifies novel human genes and
            conserved non-coding sequences
  JOURNAL   Gene 294 (1-2), 35-44 (2002)
   PUBMED   12234665
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK003782.1, AK168701.1, CT030159.11 and AK145867.1.
            
            On Feb 8, 2019 this sequence version replaced NM_025370.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK148379.1, AK168701.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-972               AK003782.1         2-973
            973-1634            AK168701.1         852-1513
            1635-1734           CT030159.11        85260-85359         c
            1735-2949           AK145867.1         1601-2815
            2950-3010           CT030159.11        83984-84044         c
FEATURES             Location/Qualifiers
     source          1..3010
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 33.26 cM"
     gene            1..3010
                     /gene="Prxl2c"
                     /gene_synonym="1110018J18Rik; Aaed1"
                     /note="peroxiredoxin like 2C"
                     /db_xref="GeneID:66129"
                     /db_xref="MGI:MGI:1913379"
     exon            1..218
                     /gene="Prxl2c"
                     /gene_synonym="1110018J18Rik; Aaed1"
                     /inference="alignment:Splign:2.1.0"
     CDS             27..707
                     /gene="Prxl2c"
                     /gene_synonym="1110018J18Rik; Aaed1"
                     /note="UPF0308 protein C9orf21 homolog; ahpC/TSA
                     antioxidant enzyme domain-containing protein 1;
                     thioredoxin-like protein AAED1; AhpC/TSA antioxidant
                     enzyme domain containing 1"
                     /codon_start=1
                     /product="peroxiredoxin-like 2C"
                     /protein_id="NP_079646.1"
                     /db_xref="CCDS:CCDS26599.1"
                     /db_xref="GeneID:66129"
                     /db_xref="MGI:MGI:1913379"
                     /translation="MAAPVTRQVSGCAGRVPSPAGSVTERGQPLAAAVAELPVLDASG
                     RRVTFGALFRERRAVVVFVRHFLCYVCKEYVEDLAKIPKSVLREADVTLIVIGQSSYH
                     HIEPFCKLTGYSHEIYVDPEREIYKRLGMKRGEEISSSGQSPHIKSNLLSGSLQSLWR
                     AVTGPLFDFQGDPAQQGGTLILGPGNNIHFVHRDRNRLDHKPINSVLQLVGVQPVNFM
                     SRPTVIHV"
     exon            219..287
                     /gene="Prxl2c"
                     /gene_synonym="1110018J18Rik; Aaed1"
                     /inference="alignment:Splign:2.1.0"
     exon            288..341
                     /gene="Prxl2c"
                     /gene_synonym="1110018J18Rik; Aaed1"
                     /inference="alignment:Splign:2.1.0"
     exon            342..447
                     /gene="Prxl2c"
                     /gene_synonym="1110018J18Rik; Aaed1"
                     /inference="alignment:Splign:2.1.0"
     exon            448..579
                     /gene="Prxl2c"
                     /gene_synonym="1110018J18Rik; Aaed1"
                     /inference="alignment:Splign:2.1.0"
     exon            580..3010
                     /gene="Prxl2c"
                     /gene_synonym="1110018J18Rik; Aaed1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1659..1664
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Prxl2c"
                     /gene_synonym="1110018J18Rik; Aaed1"
                     /note="hexamer: AATAAA"
     polyA_site      1679
                     /gene="Prxl2c"
                     /gene_synonym="1110018J18Rik; Aaed1"
                     /note="major polyA site"
     regulatory      2967..2972
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Prxl2c"
                     /gene_synonym="1110018J18Rik; Aaed1"
                     /note="hexamer: AATGAA"
     polyA_site      2996
                     /gene="Prxl2c"
                     /gene_synonym="1110018J18Rik; Aaed1"
                     /note="major polyA site"
ORIGIN      
        1 gacctgagcg gtcgccctcc tccgcgatgg ccgcgccggt gacgcggcag gtcagcggct
       61 gcgcaggccg ggtcccgagc ccggctggct cggtcacaga gcgcgggcag ccgctagcgg
      121 ccgccgtagc ggagctgccc gtgctggacg cgtctgggag acgggtgacg ttcggagcgc
      181 tgttccgaga gcggcgagcc gtggtggtgt ttgtgaggca tttcttgtgt tacgtctgta
      241 aagaatatgt cgaagatctg gccaaaatcc ccaagagcgt cctccgagaa gcagatgtca
      301 ccctcatagt gattggacaa tcatcatacc atcatattga gcctttctgc aaactgactg
      361 gatattctca tgaaatctat gttgatcctg agagagaaat ttacaaaaga ttgggaatga
      421 aaagaggtga agaaatttcc tcctctggac agagccccca cataaagtcc aacctgctct
      481 cgggaagcct tcagagcctg tggcgggcag tcactggccc actttttgat ttccaaggag
      541 acccagctca gcaaggagga accctcattt taggtccagg taacaacatc cactttgtgc
      601 accgagacag gaataggttg gatcacaaac ccataaactc tgttttacag cttgtggggg
      661 ttcagcctgt gaacttcatg agcagaccta cagtcatcca cgtgtgactt tacgtggcat
      721 cttccacttg tgaatgggcc cttaaaacgt gaaccaaaat gccaggcacc atggcttcat
      781 agggctatga aacacagaac ttatgtgcct atagaactac atgctgaggg acatcagttg
      841 tcagaaatgg aacagacagt ttaaatttta taacttctat aattttatac aaaatatata
      901 aaagtcaaac attataaaac tatcattgtt aatatcattt tatgagtatc cactcaataa
      961 aagatttttg gcaactaaaa tataagaagg gggcgctaga aaaatcactc agtggttaag
     1021 agcacttgct tctcttgcag aagacccagg acccaggttt ggttcctaat acccacatgg
     1081 tagctttcaa tcatctgtaa ctccagttcc aatggatcca acaccttata gcctctggta
     1141 cacatgcata catataggca aacactcata cacataaaac gacagatctt ttaagaaata
     1201 catatgtgtg tatagggaag agaatcgaag aaggggccag atatgatggc acaggcttgt
     1261 aatcctagcc ctgagaaatg gagacgagtc aggcctgagc tatatagaga gaacctttct
     1321 gagaaaaagt cagggctggt gagatggctc agtggataag agcactgact gctcttccaa
     1381 aggtcctgag ttcaaatccc agcaaccaca tggtggcttg caaccaccca taagatctga
     1441 tgccctcttc tggtgcatct gaagatagct acagtgtact tacttataat aataaataat
     1501 ttttttttaa aaagaaaaag tcagttaatt gcagggagga atacataaag ggaaagaaaa
     1561 gcagttcagg aaagttactc tgtaaacagt gtagccacag atgtgtatgt acttggtttt
     1621 tttttttttt ttttggtatg cttggagaaa aaatggcaaa taaacacaga acaactttat
     1681 gtgtctgtgg tgaaagtttc ggtttttttt tggtttggtt tttttttttt tttggttttt
     1741 tgagacaggg tttctctgta tagccctggc tgtcctggaa ctcactttgt agaccaggct
     1801 ggcctcgaac tcagaaatcc acctgcctct gcctcccaag tgctgggatt aaaggcgtgc
     1861 gccaccaccg cccggcagtt ttggtatttc tgcttgcttt ccaagctctt tatttcccgt
     1921 gctctctcat aagcttggct gagttggggg tgagtcagga aagaatcttt aaacattaaa
     1981 gtgaaaatgc ctgcctacat caacttcttt ggaggtgcag gtaatttctt gcacaggggt
     2041 tatctcccaa gtgaggattc atggaacctc ttacagacag cagatgcctg ctaccgattg
     2101 ccctaagctt gttttggtgg aataagttga aggaaatact acttggtttg gtttgatttg
     2161 atttggggac tgtgctggga ataaaaaacc aaagttttta tgcatgtgag cacattctgt
     2221 tacactgagc tacatcccca gccctgatca tgttttaaat atctaggaca aaggggacct
     2281 agaatatgta taactctaga tacttctcct agcagttcac atggatgtgc acgcgcgcgc
     2341 gcgcacacac acacacacac acatattctg ctttttaaag ggcaatatta agattttttt
     2401 aaaaaccttt gtaatgaaaa ggtatgctgt gtgattgatt gggtatgtta gcccacactc
     2461 atgatctcag cacaggcaga gtcagtaaga caggggtaga tactgagttc caggccagtc
     2521 tgggctatat atggtgaaat tgtgtctcaa aaataacaaa aagaagtgtg cagccaaata
     2581 tggtgattca cgaggaagca gaggcaggag ggtctcggtg agttccaaga cagccaaggg
     2641 ctacatagag agacgctgtc tcaaaaacag aacaattaaa gacaaatgtg cattgggtta
     2701 ggttgtacag tagtaaacat ctgcattttc tcaccccaga tctgtcttat ttggaaaact
     2761 attttcatat tttacctctc aaaaatctta cttttgtccc agaaattctc atgaaatgta
     2821 tcataaaatc aaaccactgg taatccttag taactgtagt actactagga ccttatactt
     2881 ttatataaaa catattaagg cacaaaaatg tatttcaatg tacttttaca cgagtatata
     2941 cggacagtca cgtttttaaa taaaaaaatg aatattttca gaatttaaaa ttaaaatttt
     3001 ttgtttgggt
//
