LOCUS       NM_028447               4801 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus proline-rich coiled-coil 1 (Prrc1), mRNA.
ACCESSION   NM_028447 XM_993538
VERSION     NM_028447.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4801)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   2  (bases 1 to 4801)
  AUTHORS   Suzuki,H., Fukunishi,Y., Kagawa,I., Saito,R., Oda,H., Endo,T.,
            Kondo,S., Bono,H., Okazaki,Y. and Hayashizaki,Y.
  TITLE     Protein-protein interaction panel using mouse full-length cDNAs
  JOURNAL   Genome Res 11 (10), 1758-1765 (2001)
   PUBMED   11591653
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY292301.1, AK143537.1 and AC122117.10.
            
            On Feb 5, 2010 this sequence version replaced NM_028447.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK143537.1, SRR9219380.14016.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-8                 BY292301.1         2-9
            9-3602              AK143537.1         1-3594
            3603-4801           AC122117.10        93571-94769         c
FEATURES             Location/Qualifiers
     source          1..4801
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="18"
                     /map="18 31.92 cM"
     gene            1..4801
                     /gene="Prrc1"
                     /gene_synonym="1190002C06Rik; 2310058D16Rik;
                     3110038B19Rik; 9430085A19Rik"
                     /note="proline-rich coiled-coil 1"
                     /db_xref="GeneID:73137"
                     /db_xref="MGI:MGI:1916106"
     exon            1..159
                     /gene="Prrc1"
                     /gene_synonym="1190002C06Rik; 2310058D16Rik;
                     3110038B19Rik; 9430085A19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            160..276
                     /gene="Prrc1"
                     /gene_synonym="1190002C06Rik; 2310058D16Rik;
                     3110038B19Rik; 9430085A19Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             180..1511
                     /gene="Prrc1"
                     /gene_synonym="1190002C06Rik; 2310058D16Rik;
                     3110038B19Rik; 9430085A19Rik"
                     /note="proline-rich and coiled-coil-containing protein 1"
                     /codon_start=1
                     /product="protein PRRC1"
                     /protein_id="NP_082723.2"
                     /db_xref="CCDS:CCDS37825.1"
                     /db_xref="GeneID:73137"
                     /db_xref="MGI:MGI:1916106"
                     /translation="MMEESGIETTPPGTPPLHPAGLAAVPSTEAHSAATSSFSSPNVS
                     GMESLPPHVYSTPQPSLPPVQPSAPPPFVSMSPAPSVPLSGTSVPPSVSPSPATAFSG
                     PPMSHFPPATSASGALLSAPPSGPPISGFSVGTTYDITRGHAGRAPQTPLMPSFSAPP
                     VTGILPAPITQQASMTSLAQGPGTTSAITFPEEQEDPRINRGQDDAPAGGIWGFIKGV
                     AGNPMVKSVLDKTKHSVESMITTLDPGMAPYIKSGGELDIVVTSNKEVKVAAVRDAFQ
                     EVFGLAVVVGEAGQSNIAPQPVGYAAGLKGAQERIDSLRRSGAIHEKQTAVSVENFIA
                     ELLPDKWFDIGCLVVEDPVHGIRLEAFTQATPVPLEFVQQAQSLTPQDYNLRWSGLLV
                     TVGEVLEKSLLNVSRTDWHLAFTGMSRRQMIYSAAKAVAGMYKQRLPPRPM"
     exon            277..666
                     /gene="Prrc1"
                     /gene_synonym="1190002C06Rik; 2310058D16Rik;
                     3110038B19Rik; 9430085A19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            667..827
                     /gene="Prrc1"
                     /gene_synonym="1190002C06Rik; 2310058D16Rik;
                     3110038B19Rik; 9430085A19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            828..930
                     /gene="Prrc1"
                     /gene_synonym="1190002C06Rik; 2310058D16Rik;
                     3110038B19Rik; 9430085A19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            931..1094
                     /gene="Prrc1"
                     /gene_synonym="1190002C06Rik; 2310058D16Rik;
                     3110038B19Rik; 9430085A19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1095..1198
                     /gene="Prrc1"
                     /gene_synonym="1190002C06Rik; 2310058D16Rik;
                     3110038B19Rik; 9430085A19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1199..1301
                     /gene="Prrc1"
                     /gene_synonym="1190002C06Rik; 2310058D16Rik;
                     3110038B19Rik; 9430085A19Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1302..4801
                     /gene="Prrc1"
                     /gene_synonym="1190002C06Rik; 2310058D16Rik;
                     3110038B19Rik; 9430085A19Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1654..1659
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Prrc1"
                     /gene_synonym="1190002C06Rik; 2310058D16Rik;
                     3110038B19Rik; 9430085A19Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1687
                     /gene="Prrc1"
                     /gene_synonym="1190002C06Rik; 2310058D16Rik;
                     3110038B19Rik; 9430085A19Rik"
                     /note="major polyA site"
     regulatory      1784..1789
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Prrc1"
                     /gene_synonym="1190002C06Rik; 2310058D16Rik;
                     3110038B19Rik; 9430085A19Rik"
                     /note="hexamer: TATAAA"
     polyA_site      1808
                     /gene="Prrc1"
                     /gene_synonym="1190002C06Rik; 2310058D16Rik;
                     3110038B19Rik; 9430085A19Rik"
     regulatory      4407..4412
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Prrc1"
                     /gene_synonym="1190002C06Rik; 2310058D16Rik;
                     3110038B19Rik; 9430085A19Rik"
                     /note="hexamer: AATAAA"
     polyA_site      4436
                     /gene="Prrc1"
                     /gene_synonym="1190002C06Rik; 2310058D16Rik;
                     3110038B19Rik; 9430085A19Rik"
ORIGIN      
        1 gtggcagcgg ggcggcgcgg aggccatctt ggcgcggggc acacgctcct ctggtcttcc
       61 tcgtccaccg taagccggat ccccgcgagg gacccccgac ccggcccccg accccgatcc
      121 gcgtgtgcag cttctgcgca ggcgctcgct ccgacccagt gtgccgtaac tgagggaaaa
      181 tgatggaaga aagtggaatc gagaccacgc cgcctggaac ccctcccctg catcctgcag
      241 gcttggctgc cgtgccctcc actgaagctc actcagctgc aaccagttcc ttctcgtctc
      301 ccaacgtgtc gggaatggag tctctgcccc cacacgtgta ttccacgcct cagccctccc
      361 tgccccctgt gcagccgtcc gcgccacctc cctttgtgtc gatgtctccg gctccttccg
      421 ttcccctgag tggcacttct gtgccgccct ccgtgtctcc atcgcctgcc actgccttca
      481 gcggccctcc gatgtcccac ttcccgcctg cgacctctgc ctcgggtgct ctcctgtctg
      541 caccgccttc agggcctccg atatcagggt tttctgtcgg tacaacctac gacatcacga
      601 ggggacatgc tgggagggcg ccccagacac ctctgatgcc gtcattttct gcacctccgg
      661 ttacaggtat cttgccagcc cccattactc agcaagccag catgacgtct ctggcccagg
      721 gacctggaac cacatcagcc attactttcc cggaggaaca ggaagatccc agaattaaca
      781 gaggccagga tgatgcccct gctggcggga tctggggttt tattaagggc gtagctggga
      841 accctatggt gaaatctgtc ctggataaga ccaagcattc tgtagaaagc atgatcacca
      901 cgctggatcc tggcatggct ccatatatca aatctggagg tgaactggat attgtcgtaa
      961 cctcaaataa agaagtgaaa gtggctgctg tccgagatgc cttccaggag gtctttggct
     1021 tagctgtggt tgttggggaa gctggacagt ccaatatcgc ccctcagcca gtcgggtatg
     1081 cagctggatt gaagggcgcc caggaacgca tcgacagcct gaggaggtcg ggagcgatcc
     1141 acgagaaaca gacggcggtg tcggtagaaa acttcattgc tgagctgctg cctgacaagt
     1201 ggtttgacat cggctgcctg gtggttgaag accctgtgca tggcatccgc ctggaagcct
     1261 ttacccaagc cacgcccgtg cctttggagt ttgtgcagca ggcgcaaagc ctgactcccc
     1321 aggactacaa tctgaggtgg tcaggccttc tggtgacagt gggggaagtc ctggaaaaga
     1381 gcttgctcaa tgtcagccgg actgattggc acctggcttt cactggcatg tctcgccgac
     1441 agatgatcta cagtgcagcc aaggccgtgg cgggcatgta taagcagcgg ctgccaccca
     1501 ggcccatgtg agagcagtgc ggggacacgg agacctgcca tcgtcacctt gggctccatg
     1561 cagaggaacc tgagtggctt ccgtgaatcc aacagttttt atgattttcc tgtaggctgc
     1621 agtcctttta aaagaaaaag tcttttttta aaaaataaag gcacaatgtc attccagtaa
     1681 agcaaaagaa atagatcctc tttttactgt cataatttca tacgtcctgg ttctcagaag
     1741 acatacacaa atatatttac agcacaattc agtataccaa atctataaag tggagatctt
     1801 cgttcacata ttggatgatt tgctcttggc tcttctgggt tcttaatatg taatgaggtc
     1861 tgtgtgtggt cactatctcg tgagtgcttg tttctgtgtg tgcacacgac cgacctcaga
     1921 catgctcagc agtggacctt acgtgcttgc tgggtgaggg gtgcacaatt tgatgtgttt
     1981 tacagaatat gggccaaatt aacagaatgg atattttttt tttttgtcat tatgtacatg
     2041 tatagtttgg aagttatact tgcttctttt ttgttttaag ttttggtatt ttacagattt
     2101 atattatgaa catcagaaaa taatgtttta tttttttcat agctatctaa aaactgaagg
     2161 gcagatcaag tatatcttag atcagaaatg tatttgcgtt tttattttgt ttatttttgt
     2221 acattggtgt ttgcttgcct gtgcatgtgt gtacagtgcc caaggaggcc agaagagggc
     2281 agcagagctc tggaactgga gtcacagatg gttgtgagct gccttgtggg tgctgggaag
     2341 gagcttgatt cctctagaag agctgtccat gttcttgccc actgacacat ctctccagca
     2401 cgttccccct cccccatgtt acttttatat aatggcgtta gcacttctat aagtcagctg
     2461 tcactacggc tgtccaacat cctctgcact gtaagaggga tcccttcttt tgagacagta
     2521 cacattttct tcaactaaag ctacatcttt tttattattt gagaatttca tcaatgtgtt
     2581 cggataacgt ttacctccca cccctccctt aactcttcca tccctactat gtgttcccgt
     2641 tcctgtcttc ctttccccag cccaccaagt gcaatttgtg ttatccaaat aggtgtgagg
     2701 ctgtgtccag tcgaccaaca agaggtgaca ccctgaaaga aacttgactg tccctctctc
     2761 agaagccacc ggctgccagt aacaccccag ctgtgtgcat tgggggccgg ggggtgtaag
     2821 cccatccgtg ctgggatgtt gtttggctgg gatgtgtaga tttaaggctg tttcttagtc
     2881 tgccttaagc acagtctgac attcctaact gtgcctctct gcctttattt cttaaggatg
     2941 ttttcaacgg gatgattttt atattcgatg ttgtttatgt tttcttccag atatactgta
     3001 ttttaccatt tgggaaattt acataagtca aaatgtagta aatttttttc ttactcagtt
     3061 gagctctcta tataggcaat tcagatatct tcctgatgac aatttgatgt gtaaatgtaa
     3121 tttaactttc tttttgatgt tgatgcagtt ctggagatgt tagccttaga ggtctctgca
     3181 ctcgctcttc cctgtcctgg cttgtgcagt gtgcctgcct gcttttcggt aattacatca
     3241 cttctgctcc ttttacagaa ggagacgttt tacttttgag gtgggtacgt gctgatcttc
     3301 aagcactgtg tgtgttgctt ggtgaggtag gaagggtgca ttgctgtggc tcttgcggtg
     3361 catggacctg gcccagggaa acgtggtctc aggacttctg gtggcttctt gatgcataag
     3421 aaacggggac ctttctctac cgcttgtttg ctgtgctctg gctttacaat ttgggtctgg
     3481 ggatgtagct ctgtgacaga acaccagcta atgtctggtc cctcagtcag tctctagaac
     3541 acaagcatgc atgcacgtgc acacacacac acgcacgcac tcacacgatg gggggggggg
     3601 gggattaaag tctgtccccg tgtaacagta tctgatgggg cattgtctgg aagacggtgt
     3661 ttcctgttct ctgaaggcag gttttgcaga tccagaaggg tcccctgcta ttctcttctt
     3721 tgtgtaaccg agtccatact agctcagtga ctgttttaga ggccatccta gtagatgcac
     3781 aagaggtcac tgacatctca tggggtgatc gtcttcctcg aaccctcaaa taacagtggc
     3841 caacttatgc gatggctcgt ttgaaaccga ataattgtcg atacctagtc cgccttctgt
     3901 gggacgggga gaagcaagag tgaagggtgg atggaagaga gaagtgtttg atccggtctg
     3961 atctcagttt cctccggccc aggagcaggg ctgacagtgg cacaggcttt tcttccccag
     4021 cctctatctg tcaccctcag gttgtgctaa accagaagaa cagggagtgc tgattgtccc
     4081 tcctgtagct cgcccaggag cctgtgtggt ggcctttagg cctggccagc ccaacgtcat
     4141 ggttccctcc ccagcccttc tgttctgtgt acttttctct tcctacgtgt ctctgtgtag
     4201 cgtctacact gacagtttta gagactttgt gggtggctgt tgcctttttc aagcctttca
     4261 ggaaaaaaaa atcatgtaac cgtttgtcac ccttgccatg gttggtgcta gcatcttttg
     4321 tgaagtttgt tgttgttgtt gttgtttttg gtttttgagt tccagattat tggaatctta
     4381 ttttaattta tttttctccg ttggaaaata aaacaggaaa aatgatttaa catccatctc
     4441 acagagttgc ttgactgttt agttccaagg tcctcctgtt cagcttctgt tgctcgtctt
     4501 gttcctgctc tggcttgctt tgttggtaac aatgctggac ctggagccga gcgtctcatt
     4561 taccggagcc cagcgctctg tactgccaca cacttctgaa gttggaaaag tgtgaagagc
     4621 taggacttgc ctgattcgct catcgttatt tttttttcct ctttagctag aggtaagtgt
     4681 gggtgtgtag gaaaacaaat gaagacacct aatgtacatc tattctgaat tatgcaaatt
     4741 agctcttact cagggtcaac taaattactt cactttgccc tttagtttac acttatttgg
     4801 c
//
