LOCUS       NM_175424               1183 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus proline rich 9 (Prr9), mRNA.
ACCESSION   NM_175424
VERSION     NM_175424.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK079463.1 and BY454445.1.
            
            On Feb 17, 2007 this sequence version replaced NM_175424.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK079463.1, BB630266.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164133
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-896               AK079463.1         2-897
            897-910             BY454445.1         268-281
            911-1183            AK079463.1         911-1183
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 40.14 cM"
     gene            1..1183
                     /gene="Prr9"
                     /gene_synonym="A030004J04Rik"
                     /note="proline rich 9"
                     /db_xref="GeneID:109314"
                     /db_xref="MGI:MGI:1925680"
     exon            1..36
                     /gene="Prr9"
                     /gene_synonym="A030004J04Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            37..1183
                     /gene="Prr9"
                     /gene_synonym="A030004J04Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             56..406
                     /gene="Prr9"
                     /gene_synonym="A030004J04Rik"
                     /codon_start=1
                     /product="proline-rich protein 9"
                     /protein_id="NP_780633.1"
                     /db_xref="CCDS:CCDS38508.1"
                     /db_xref="GeneID:109314"
                     /db_xref="MGI:MGI:1925680"
                     /translation="MSFNDQQCKQPCVPPPCLQKTQEKCQAQAEDVCVSSCQDPCQDK
                     CPQQAQEVCVSQCQELSQGNCPQQGQDPCLPPSQDQCLPQCAEPCQELAQTKCVEEFP
                     QKVQEKCSSQSKGK"
     regulatory      1162..1167
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Prr9"
                     /gene_synonym="A030004J04Rik"
                     /note="putative"
     polyA_site      1183
                     /gene="Prr9"
                     /gene_synonym="A030004J04Rik"
                     /note="putative"
ORIGIN      
        1 agtccacatc cttcattgaa tctcattgaa gatcaggctc ttcaaatcac ctgaaatgtc
       61 tttcaatgat caacagtgca agcaaccatg tgtgccaccc ccatgtcttc aaaagaccca
      121 agaaaagtgc caggcacaag ctgaggatgt gtgtgtctcc tcatgtcagg acccctgcca
      181 agataaatgt ccacaacaag ctcaggaagt atgtgtttct cagtgccagg agttaagcca
      241 aggaaactgc ccacaacaag gccaagatcc atgtctacct ccaagccaag accagtgcct
      301 tcctcagtgt gcggagccat gccaggagct agcacaaaca aaatgtgtgg aggagttccc
      361 acagaaggta caggagaagt gttcatccca gagcaagggg aagtagctgc tcaaatgcca
      421 tctggagtca agaagatggc caacagaaga aaatacaacc ccagtcctac ggtgaccttc
      481 tcctgtgggt atctctgtgt aagatactgt cttgtctcct gacttcctca gtattccagg
      541 acttggtctg tacctctgaa gatagttctc tgtattttat taacctctgt gaataagtgt
      601 tctcagcagc tggcagacgg tcaagagtat gggaatgttg tggttattga ggcagaccat
      661 caaagcctaa cacaactctc ctggggcaaa acctcactta gcccctggta cataatggcc
      721 aaggatgcct ttgtccatct ttcagagtgc aagtatctct ttcaagcctc aagagaatct
      781 gaatttaatg gctttatggt gagcatcacc actacaatga gtatgaagaa attggtgatg
      841 ctacaaaatc aaaaatggtt taattttgtt tgtgcatcct aaccaaaaaa aaaaaaatag
      901 ctgaacattg taatgtggtc tgtgctttgt aaaattcaaa tgaaatgttt taaaagacat
      961 aattcaaaca gcctataaga aacacaagtt gggatcttta gatctttgtc agtctttgtg
     1021 ctttgtagat gatctgcttt ggaccatttg gtgtgagagg gctttggata ctatgattca
     1081 tctttagttt gtgtttctgg gataggagct ggcttctctc caacttcctt gcctttcccc
     1141 cttggtggaa gtaaaatata taataaagct ctttctaagg ctg
//
