LOCUS       NM_001358019            2553 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus proline rich 35 (Prr35), mRNA.
ACCESSION   NM_001358019 XR_105886
VERSION     NM_001358019.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2553)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2553)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK044505.1 and AW124301.1.
            
            On Nov 15, 2017 this sequence version replaced XR_105886.5.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK044505.1, SRR7345562.158161.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849385, SAMN01164136
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2534              AK044505.1         2-2535
            2535-2553           AW124301.1         1-19                c
FEATURES             Location/Qualifiers
     source          1..2553
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 13.03 cM"
     gene            1..2553
                     /gene="Prr35"
                     /gene_synonym="A93001711Rik; A930017K11Rik"
                     /note="proline rich 35"
                     /db_xref="GeneID:100034748"
                     /db_xref="MGI:MGI:2442713"
     exon            1..575
                     /gene="Prr35"
                     /gene_synonym="A93001711Rik; A930017K11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            576..1684
                     /gene="Prr35"
                     /gene_synonym="A93001711Rik; A930017K11Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             615..2330
                     /gene="Prr35"
                     /gene_synonym="A93001711Rik; A930017K11Rik"
                     /codon_start=1
                     /product="proline-rich protein 35"
                     /protein_id="NP_001344948.1"
                     /db_xref="CCDS:CCDS89026.1"
                     /db_xref="GeneID:100034748"
                     /db_xref="MGI:MGI:2442713"
                     /translation="MSREAGSCRVGTGTRARSRKPKKPHYIPRPWGKPYNYKCFQCPF
                     TCLEKSHLYNHMKYSLCKDSLSLLLDSPDWACRRAPPSPRPRVPTPNCSTDFSDPSSK
                     PTEPDLIVTDSFSQRRSGRGPKPGPEESPGSLPPLARPIRKGPGTSGLLAESWKPGLS
                     GGMLSGTLGTIASTPGSESSVPCYPPPAQGEFPEAQSLHLSLLGVNYPLGPGLFSYLG
                     PSLAAAAAHMPFLASASPLLPPTAFPAPQTPERPGLAPRLYYPLLLEHSLGQSSGRAA
                     PAKSSVPLKGPPGALSAPGLLKVPVPGPGGPWPHGTSRDPGHEGELGRVTQSNPQKRL
                     PTGNMPELPKAPLNLAKFGCQSSLPTGSSLLLWPEDKEPGDPEASGPEFHLLQHPQGQ
                     GLGSTVPVGEDLTQAFGDYARVEQCLGQLAPAGGLAPRPLREQLGKIRRELFTIHQAL
                     ARAARPLDTPLDLSVKRVPTKGTEAPSESWRLHDPGPVLARGTSEPSSILGPVLESFS
                     SRTTKCEADSSVPPPVLPLQAPEDPVIPGSGWGNRLGAGSSQTPKDTPSLQILPSADF
                     CSQPP"
     exon            1685..2539
                     /gene="Prr35"
                     /gene_synonym="A93001711Rik; A930017K11Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtggggatg aggcccttcc gatagtgggc actggcactg gatctcctaa agcagggagg
       61 aacctcttag gacgtgaaga gtgggggctg ggaatggcag gatgtatcca ggggtagggg
      121 tgtcagtgca tagtgaccat cagcgggtag agcaaggggt gtgggagacg cctcctgttt
      181 ggagtaaaag aactacatag gctccctggc ttgcccagtg gaagctggca aggagatata
      241 gactccaccg cctgagctcc gggctttggc ctctcctagt ccgctctgga ggctccctgt
      301 cctagggttc agccccaagg ccctgatttg ggtgggcagg cggctgtcag gggccagagc
      361 cctgactgat gcgtgctgac gccccctctt gccgctgcgg ggacccggga gacttggctg
      421 cctctacgca cccccgcggc agcctgcagg cgtcgggggc ggggacggtg ccaggcgccc
      481 ctcactcggc cccgcacctg cgcgccactc caatctcttg cggcactgtg gcgggtccgg
      541 cctcgctccc tccaggagca gtcccagcgc gtccggtggc catgatacct gggcttgcct
      601 gctagcaggc tgccatgtct cgagaggcag gttcatgccg agtgggcacg gggacaaggg
      661 cacggtcacg gaagcccaag aagccacatt atatcccacg gccctggggc aaaccctaca
      721 actataagtg cttccagtgc cccttcacct gcctggagaa gtcacatctt tataaccaca
      781 tgaagtacag cctctgcaaa gactccctct ctctactgtt agactcccct gactgggcat
      841 gccgccgtgc gcccccctca cccaggcctc gggtgcccac ccccaactgc tccacagact
      901 tctcagaccc tagtagcaag ccaactgagc cagatctcat tgtcactgac agcttttccc
      961 agcgtcgttc tggcaggggc cccaaacctg gaccagagga gtcgccaggg tcactgcccc
     1021 cactggctag acccatccgg aagggtccag gcaccagtgg ccttttggca gagtcatgga
     1081 agccaggact gagtggtggc atgctgagtg ggactttagg gactatagct tcaaccccag
     1141 gctctgagag tagtgtcccc tgctacccac cacctgccca gggtgagttc cctgaagccc
     1201 agagcctcca cttatcattg ctgggtgtca actaccctct tggcccaggc ctcttttcct
     1261 atctggggcc ctcactggct gctgctgcag cccacatgcc cttcttggcc tcagcaagcc
     1321 ctttgctgcc ccccacagcc ttcccagccc cacagacacc cgagcgtcca ggcctggccc
     1381 cccgcctgta ctacccacta ctactagaac acagcctagg acaatcatca ggcagggctg
     1441 cccctgccaa gtcctctgtg cccctcaagg ggcctcctgg ggctctgtct gctcctgggc
     1501 tgctgaaggt gcctgtgcca gggcccgggg gaccctggcc ccatggtact tccagagacc
     1561 cagggcatga aggagagctg gggagagtga ctcagagcaa cccgcagaag aggctgccca
     1621 cgggcaacat gcctgagctc ccaaaggccc ccttgaacct ggcaaaattt ggctgtcaga
     1681 gcagcctgcc gacaggctcc tccctcttac tctggcctga ggacaaggag ccaggtgacc
     1741 ctgaggcctc aggtcctgag ttccaccttc tgcagcatcc acaaggccaa gggctaggaa
     1801 gtacagtccc agtgggagag gacctgaccc aggcctttgg tgactatgcc agagtggagc
     1861 agtgcttggg gcagctggca ccagctgggg gtctagcccc cagacctctt cgggagcagc
     1921 ttggcaagat tcgccgggag ctgttcacta tccatcaggc gctggcccgg gctgctcgtc
     1981 cactggacac acccttggac ctctcagtga agcgggtacc taccaaggga actgaggcac
     2041 cctcagaatc ctggaggctg catgatccag gccctgtgct ggccaggggg acctcagagc
     2101 cctccagcat actgggtcca gtacttgagt ctttctcgag ccgcaccacc aagtgtgagg
     2161 ctgactccag tgtccctcct cctgtcctcc ccctccaggc ccccgaggac cctgtcattc
     2221 ctggtagtgg ctggggtaat cggcttggag ctggcagctc ccagacccct aaagataccc
     2281 cgagcttaca gatcctccca agtgctgact tctgttcaca gccaccatag agtatgggtt
     2341 cctctccctg acctgggccc cgttgtctgg gcctgtccag tgtcagtatg catgtgttct
     2401 gaacagataa ccgccgccca cccagactcc cccaccagcc cgtggtagag acttacctat
     2461 gtgttcacat ggacatagca aggtcatgat ttatttattg aacagagttg tggacattaa
     2521 aatagaaacc accttcaaaa aaaaaaaaaa aaa
//
