LOCUS       NM_029345                789 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus proline rich 29 (Prr29), mRNA.
ACCESSION   NM_029345 XM_126508 XM_912967
VERSION     NM_029345.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 789)
  AUTHORS   Katayama,S., Tomaru,Y., Kasukawa,T., Waki,K., Nakanishi,M.,
            Nakamura,M., Nishida,H., Yap,C.C., Suzuki,M., Kawai,J., Suzuki,H.,
            Carninci,P., Hayashizaki,Y., Wells,C., Frith,M., Ravasi,T.,
            Pang,K.C., Hallinan,J., Mattick,J., Hume,D.A., Lipovich,L.,
            Batalov,S., Engstrom,P.G., Mizuno,Y., Faghihi,M.A., Sandelin,A.,
            Chalk,A.M., Mottagui-Tabar,S., Liang,Z., Lenhard,B. and
            Wahlestedt,C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   2  (bases 1 to 789)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK153786.1, BC116233.1 and AK009213.1.
            
            On or before Aug 19, 2009 this sequence version replaced
            XM_912967.2, XM_126508.5.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK153786.1, CJ137812.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-521               AK153786.1         2-522
            522-694             BC116233.1         471-643
            695-789             AK009213.1         1018-1112
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 69.05 cM"
     gene            1..789
                     /gene="Prr29"
                     /gene_synonym="2310007L24Rik"
                     /note="proline rich 29"
                     /db_xref="GeneID:75573"
                     /db_xref="MGI:MGI:1922823"
     exon            1..92
                     /gene="Prr29"
                     /gene_synonym="2310007L24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            93..168
                     /gene="Prr29"
                     /gene_synonym="2310007L24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            169..275
                     /gene="Prr29"
                     /gene_synonym="2310007L24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            276..496
                     /gene="Prr29"
                     /gene_synonym="2310007L24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            497..567
                     /gene="Prr29"
                     /gene_synonym="2310007L24Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            568..789
                     /gene="Prr29"
                     /gene_synonym="2310007L24Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      751..756
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Prr29"
                     /gene_synonym="2310007L24Rik"
                     /note="hexamer: AGTAAA"
     polyA_site      773
                     /gene="Prr29"
                     /gene_synonym="2310007L24Rik"
                     /note="major polyA site"
ORIGIN      
        1 agagctgcca aggtaactta acctgctagg gcatggcctc cctcgggagt gggaactgga
       61 gtggtgtccc aacacagagc acagccccta tgccctgggt gaccatcttg cagcccttcc
      121 cttggacagt cccatcttct cagcctcagc ataaccgggt caaggaagac ctgctggagc
      181 tgatgatgct acagaacgca cagatgcacc agctgctact gggccaactg gtggcagatg
      241 ccctgaaccc agggccagag tggcccagcc caccggtcca caccgacagt cacgaggagc
      301 agatggagga agagatggag atgcaggagc aagagccttt ggtttaccac catcactact
      361 tgccttgccc agtgactccc ttgggtccca tgtcactctg gccagcctcc ttcctccctg
      421 ttcccccaca tcagcctccc tggcagggtg aaccgagaat tcagcaccag ccccctgcct
      481 ccaggcaaga ggaggtgaga gatgtgcccc cacccccacc ccccagtgca acggggactg
      541 ttggtgcaga tgtacctcca gcttcagact actatgatgc ggagagcctg ccatgaagat
      601 agatgtacac caggccttgt caccttctgc acagtgatgc caaaccctgg agcaactctg
      661 cacccatgct ggcccttctt acccactctg cgcccccaac cccaagccct catcaggctc
      721 tctactgcca ttttgtgctg gctgttctgg agtaaaggct cctttaagcc caaccatgac
      781 ccagaagcc
//
