LOCUS       NM_001374643            2426 bp    mRNA    linear   ROD 04-AUG-2024
DEFINITION  Mus musculus proline and serine rich 3 (Proser3), transcript
            variant 1, mRNA.
ACCESSION   NM_001374643 XM_030242696
VERSION     NM_001374643.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2426)
  AUTHORS   Hansen,G.M., Markesich,D.C., Burnett,M.B., Zhu,Q., Dionne,K.M.,
            Richter,L.J., Finnell,R.H., Sands,A.T., Zambrowicz,B.P. and
            Abuin,A.
  TITLE     Large-scale gene trapping in C57BL/6N mouse embryonic stem cells
  JOURNAL   Genome Res 18 (10), 1670-1679 (2008)
   PUBMED   18799693
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC167970.4.
            
            On Oct 9, 2019 this sequence version replaced XM_030242696.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7345562.3528495.1,
                                           SRR7974084.19471.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-98                AC167970.4         67986-68083
            99-195              AC167970.4         70588-70684
            196-363             AC167970.4         71083-71250
            364-488             AC167970.4         73864-73988
            489-589             AC167970.4         74066-74166
            590-672             AC167970.4         76518-76600
            673-800             AC167970.4         76677-76804
            801-976             AC167970.4         79195-79370
            977-1895            AC167970.4         79454-80372
            1896-1977           AC167970.4         80461-80542
            1978-2426           AC167970.4         80709-81157
FEATURES             Location/Qualifiers
     source          1..2426
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 18.51 cM"
     gene            1..2426
                     /gene="Proser3"
                     /note="proline and serine rich 3"
                     /db_xref="GeneID:333193"
                     /db_xref="MGI:MGI:2681861"
     exon            1..98
                     /gene="Proser3"
                     /inference="alignment:Splign:2.1.0"
     exon            99..195
                     /gene="Proser3"
                     /inference="alignment:Splign:2.1.0"
     CDS             137..2119
                     /gene="Proser3"
                     /note="isoform 1 is encoded by transcript variant 1;
                     proline and serine-rich protein 3"
                     /codon_start=1
                     /product="proline and serine-rich protein 3 isoform 1"
                     /protein_id="NP_001361572.1"
                     /db_xref="CCDS:CCDS90202.1"
                     /db_xref="GeneID:333193"
                     /db_xref="MGI:MGI:2681861"
                     /translation="MFPKVDNPLGHQETRTGATRSQRPQAPKATAASSDELSEESWPS
                     SSWTPSPASTTEGQSTSPPCNLIDNEDSIVAKYINRFRQAQPTSREDRQPAGPTSADF
                     WWLQPTADSSGHLAAGAGEPTGRSAVTGPSPTGVSSTSLASAPLQKVKQSLNSWNSSL
                     LDLETLSLQSRAARLLKRSKASLNDASSSSFPISSDGLSPSSVTFNPDSNKSSNPKEP
                     VLGAPGPSQAIPAPRPASSQATLKPEDDILYQWRQRRKLEQSLQGAGDGTWVLPRMPA
                     LTTQTPPVSAVNLGSQDTQPNCTAPCGSVAQPPPSQAFYMERPPLSGPSPHIWAPGTH
                     GVLWAPQANPWVSFGMLPTTLLTSTLAPLASFPVPPTSTSTTPAPTPTPQVCIPGPPT
                     SAPPPCASTPASTLPLPDTPQGPAIPELSSSIQPKKVGPKPRRVSTSSHQKTTVPDTT
                     AFEGPCSQLRGALSQVVTARLFPDSPEDTPPSEADFRKVQAIPSQAKVLRPPPESRRG
                     SKTESRKSQVTLPADAGDPQPATAPKASTLLEVQPREFKMSAPRMGAGDPLTIVPPAS
                     SHAPSEDLLSQATKLLQAAEDSDGSEFQEDPVLQLLRAQRAELRQQKRKVDAQLSLLL
                     DHTKDPGSSSPLARSPSRSSRMRLRREGTSLESRRL"
     exon            196..363
                     /gene="Proser3"
                     /inference="alignment:Splign:2.1.0"
     exon            364..488
                     /gene="Proser3"
                     /inference="alignment:Splign:2.1.0"
     exon            489..589
                     /gene="Proser3"
                     /inference="alignment:Splign:2.1.0"
     exon            590..672
                     /gene="Proser3"
                     /inference="alignment:Splign:2.1.0"
     exon            673..800
                     /gene="Proser3"
                     /inference="alignment:Splign:2.1.0"
     exon            801..976
                     /gene="Proser3"
                     /inference="alignment:Splign:2.1.0"
     exon            977..1895
                     /gene="Proser3"
                     /inference="alignment:Splign:2.1.0"
     exon            1896..1977
                     /gene="Proser3"
                     /inference="alignment:Splign:2.1.0"
     exon            1978..2426
                     /gene="Proser3"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2406..2411
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Proser3"
                     /note="hexamer: AATAAA"
     polyA_site      2426
                     /gene="Proser3"
                     /note="major polyA site"
ORIGIN      
        1 gacggcgttg cttagcgagg agagtaggcg cagggttgtt ccgcgaagaa gctccgctgg
       61 cgctaaggct gcggtaaatg ccgacaaact gactgcagcc tgttagtttt cacctcccaa
      121 gacaacccct ttggaaatgt tccccaaggt ggacaaccct ttgggccatc aagaaaccag
      181 aactggagcc acaaggtctc aaaggccaca agctcccaag gccacagcag ccagttccga
      241 tgagctgtct gaggagtcct ggccatctag ttcatggacc ccttccccag ccagtaccac
      301 tgagggacaa agtacctctc caccctgcaa cttaattgac aacgaggact caatagtagc
      361 caagtacata aacaggttcc gccaagctca gcccacgagc agagaggacc gccagcctgc
      421 aggcccgacc tcagctgact tttggtggct acagcctaca gcagactcga gtggtcacct
      481 tgcagcagga gctggtgaac ctacaggaag atctgctgtg acaggtccat ctcccactgg
      541 tgtgtccagt acatctctgg cttctgcgcc tcttcagaaa gtaaagcaga gtctgaactc
      601 atggaactcg tctctgctgg acttggagac cctaagccta caaagccgag ctgccaggct
      661 gctcaagcgc agcaaggcct ccctcaacga tgccagcagc tcctccttcc ccatcagctc
      721 cgatggcctc tctcccagct ctgtgacctt caatccggac tccaacaaga gttctaatcc
      781 caaagaacct gtgctgggag ccccggggcc atcccaggcc atccctgcac cccgcccagc
      841 ctcgtcccag gcaacactta agcctgagga tgacatttta taccaatggc ggcagcggag
      901 gaagcttgaa cagtctctcc agggcgcagg tgatggaacc tgggtgttgc ctcggatgcc
      961 ggccctcacc acgcagactc ctcctgtctc tgccgtgaat cttggttccc aggacaccca
     1021 gcctaactgc actgcaccat gtggcagtgt ggcccagcct cctccctcac aggccttcta
     1081 tatggagagg ccacctcttt cagggccctc tccacacatc tgggcccccg gaacccacgg
     1141 ggttctctgg gccccacagg ccaatccttg ggtatctttt gggatgcttc ctaccacact
     1201 gctaacctcc acccttgctc ccttggcttc ctttcctgta ccacctacct ctacttcaac
     1261 taccccagct cccaccccca ctccccaggt ctgcatccca gggcccccaa cctccgctcc
     1321 acccccctgc gcttccaccc ccgcttccac cctcccacta cctgacaccc cccagggacc
     1381 agccatccct gagctgagta gctctatcca gcccaagaag gtgggcccca agccaaggag
     1441 ggtgagcact tcgtctcacc agaagactac ggtgccagac actacagctt ttgagggtcc
     1501 ctgttcacag ctcagggggg ccctgagcca ggtagtgaca gctcggctgt tcccggacag
     1561 cccggaggat acgcctccat ctgaggcaga tttccggaaa gtccaggcca tcccttctca
     1621 agccaaagtt ctgcgacctc cacctgagtc tcggcgtggg tccaagacag agtcccgcaa
     1681 aagtcaagtc accctcccag ctgacgctgg ggatccacag ccggctacag ctccaaaggc
     1741 atccactctg ttagaggtcc aaccacgtga attcaagatg tctgcaccca ggatgggagc
     1801 aggtgacccc ttgaccattg tcccccctgc ctcaagccac gccccttccg aggacttgct
     1861 atcccaggcc accaaacttc tacaggctgc ggaagactcg gacggcagcg agtttcagga
     1921 agatcctgtg ttgcagctgc taagggctca gagggcagag ctccggcagc agaaaaggaa
     1981 ggtggatgcc cagttatctc tcctcttgga ccacactaaa gacccgggat cttcgtctcc
     2041 tctagccagg tcaccttcca ggtcctcaag aatgcggttg aggagggaag gaacctccct
     2101 tgagtccaga cgactttgaa ttagaaaaat tctggttttt cctgggctga ggagatagct
     2161 cagtgggcaa agaacttgca agtgtggagg ctcgagtttg gatctcctga acctgcatag
     2221 aggtagcgga caggccagct ggcccatgga gatggacggg gctcaatcca ggtagaaggc
     2281 aaagacgaat ctctgaaatt ctctgacttc cacacacgag ctgtggggca catacacact
     2341 acaccacaca caacaccaca cacacacaca cacacacaca cacacacaca cacacacaga
     2401 gtaaaaataa agttgtcccc aattaa
//
