LOCUS       NM_013637                400 bp    mRNA    linear   ROD 06-JUN-2024
DEFINITION  Mus musculus protamine 1 (Prm1), mRNA.
ACCESSION   NM_013637
VERSION     NM_013637.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   Dali,O., D'Cruz,S., Legoff,L., Diba Lahmidi,M., Heitz,C.,
            Merret,P.E., Kernanec,P.Y., Pakdel,F. and Smagulova,F.
  TITLE     Transgenerational epigenetic effects imposed by neonicotinoid
            thiacloprid exposure
  JOURNAL   Life Sci Alliance 7 (2), e202302237 (2023)
   PUBMED   37973188
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 400)
  AUTHORS   Moritz,L., Schon,S.B., Rabbani,M., Sheng,Y., Agrawal,R.,
            Glass-Klaiber,J., Sultan,C., Camarillo,J.M., Clements,J.,
            Baldwin,M.R., Diehl,A.G., Boyle,A.P., O'Brien,P.J., Ragunathan,K.,
            Hu,Y.C., Kelleher,N.L., Nandakumar,J., Li,J.Z., Orwig,K.E.,
            Redding,S. and Hammoud,S.S.
  TITLE     Sperm chromatin structure and reproductive fitness are altered by
            substitution of a single amino acid in mouse protamine 1
  JOURNAL   Nat Struct Mol Biol 30 (8), 1077-1091 (2023)
   PUBMED   37460896
  REMARK    GeneRIF: Sperm chromatin structure and reproductive fitness are
            altered by substitution of a single amino acid in mouse protamine
            1.
REFERENCE   3  (bases 1 to 400)
  AUTHORS   Uchida,A., Imaimatsu,K., Suzuki,H., Han,X., Ushioda,H., Uemura,M.,
            Imura-Kishi,K., Hiramatsu,R., Takase,H.M., Hirate,Y., Ogura,A.,
            Kanai-Azuma,M., Kudo,A. and Kanai,Y.
  TITLE     SOX17-positive rete testis epithelium is required for Sertoli valve
            formation and normal spermiogenesis in the male mouse
  JOURNAL   Nat Commun 13 (1), 7860 (2022)
   PUBMED   36543770
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 400)
  AUTHORS   Merges,G.E., Meier,J., Schneider,S., Kruse,A., Frobius,A.C.,
            Kirfel,G., Steger,K., Arevalo,L. and Schorle,H.
  TITLE     Loss of Prm1 leads to defective chromatin protamination, impaired
            PRM2 processing, reduced sperm motility and subfertility in male
            mice
  JOURNAL   Development 149 (12) (2022)
   PUBMED   35608054
  REMARK    GeneRIF: Loss of Prm1 leads to defective chromatin protamination,
            impaired PRM2 processing, reduced sperm motility and subfertility
            in male mice.
REFERENCE   5  (bases 1 to 400)
  AUTHORS   Gustafson,E.A., Seymour,K.A., Sigrist,K., Rooij,D.G.D.E. and
            Freiman,R.N.
  TITLE     ZFP628 Is a TAF4b-Interacting Transcription Factor Required for
            Mouse Spermiogenesis
  JOURNAL   Mol Cell Biol 40 (7), e00228-19 (2020)
   PUBMED   31932482
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 400)
  AUTHORS   Geier,C., Kreysing,J., Boettcher,H., Pohlmann,R. and von Figura,K.
  TITLE     Localization of lysosomal acid phosphatase mRNA in mouse tissues
  JOURNAL   J Histochem Cytochem 40 (9), 1275-1282 (1992)
   PUBMED   1506664
REFERENCE   7  (bases 1 to 400)
  AUTHORS   Tamura,T., Makino,Y., Mikoshiba,K. and Muramatsu,M.
  TITLE     Demonstration of a testis-specific trans-acting factor Tet-1 in
            vitro that binds to the promoter of the mouse protamine 1 gene
  JOURNAL   J Biol Chem 267 (7), 4327-4332 (1992)
   PUBMED   1537824
REFERENCE   8  (bases 1 to 400)
  AUTHORS   Engel,W., Keime,S., Kremling,H., Hameister,H. and Schluter,G.
  TITLE     The genes for protamine 1 and 2 (PRM1 and PRM2) and transition
            protein 2 (TNP2) are closely linked in the mammalian genome
  JOURNAL   Cytogenet Cell Genet 61 (2), 158-159 (1992)
   PUBMED   1395729
REFERENCE   9  (bases 1 to 400)
  AUTHORS   Johnson,K.R., Cook,S.A., Bustin,M. and Davisson,M.T.
  TITLE     Genetic mapping of the murine gene and 14 related sequences
            encoding chromosomal protein HMG-14
  JOURNAL   Mamm Genome 3 (11), 625-632 (1992)
   PUBMED   1360278
REFERENCE   10 (bases 1 to 400)
  AUTHORS   Le Roy,H., Simon-Chazottes,D., Montagutelli,X. and Guenet,J.L.
  TITLE     A set of anonymous DNA clones as markers for mouse gene mapping
  JOURNAL   Mamm Genome 3 (4), 244-246 (1992)
   PUBMED   1351769
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT010583.8.
            
            On Aug 14, 2018 this sequence version replaced NM_013637.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CN842143.1, BU937421.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-198               CT010583.8         86254-86451         c
            199-400             CT010583.8         85960-86161         c
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 5.87 cM"
     gene            1..400
                     /gene="Prm1"
                     /gene_synonym="Prm-1"
                     /note="protamine 1"
                     /db_xref="GeneID:19118"
                     /db_xref="MGI:MGI:97765"
     exon            1..198
                     /gene="Prm1"
                     /gene_synonym="Prm-1"
                     /inference="alignment:Splign:2.1.0"
     CDS             93..248
                     /gene="Prm1"
                     /gene_synonym="Prm-1"
                     /note="cysteine-rich protamine"
                     /codon_start=1
                     /product="sperm protamine P1"
                     /protein_id="NP_038665.1"
                     /db_xref="CCDS:CCDS27956.1"
                     /db_xref="GeneID:19118"
                     /db_xref="MGI:MGI:97765"
                     /translation="MARYRCCRSKSRSRCRRRRRRCRRRRRRCCRRRRRRCCRRRRSY
                     TIRCKKY"
     exon            199..400
                     /gene="Prm1"
                     /gene_synonym="Prm-1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acagcccaca aaattccacc tgctcacagg ttggctggct cgacccaggt ggtgtcccct
       61 gctctgagcc agctcccggc caagccagca ccatggccag ataccgatgc tgccgcagca
      121 aaagcaggag cagatgccgc cgtcgcaggc gaagatgtcg cagacggagg aggcgatgct
      181 gccggcggag gaggcgaaga tgctgccgtc gccgccgctc atacaccata aggtgtaaaa
      241 aatactagat gcacagaata gcaagtccat caaaactcct gcgtgagaat tttaccagac
      301 ttcaagagca tctcgccaca tcttgaaaaa tgccaccgtc cgatgaaaaa caggagcctg
      361 ctaaggaaca atgccacctg tcaataaatg ttgaaaactc
//
