LOCUS       XM_036164422            8592 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus PR domain containing 16 (Prdm16),
            transcript variant X7, mRNA.
ACCESSION   XM_036164422
VERSION     XM_036164422.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8592
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..8592
                     /gene="Prdm16"
                     /gene_synonym="5730557K01Rik; csp1; mel1"
                     /note="PR domain containing 16; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     mRNAs, 13 ESTs, 334 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 2 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:70673"
                     /db_xref="MGI:MGI:1917923"
     CDS             963..3926
                     /gene="Prdm16"
                     /gene_synonym="5730557K01Rik; csp1; mel1"
                     /codon_start=1
                     /product="histone-lysine N-methyltransferase PRDM16
                     isoform X7"
                     /protein_id="XP_036020315.1"
                     /db_xref="GeneID:70673"
                     /db_xref="MGI:MGI:1917923"
                     /translation="MFPNKYSLEQHMIVHTEEREYKCDQCPKAFNWKSNLIRHQMSHD
                     SGKRFECENCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQHKHIHST
                     VKPFICEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRRFCEGK
                     NHYTPGSIFTPGLPLTPSPMMDKTKPSPTLNHGGLGFSEYFPSRPHPGSLPFSAAPPA
                     FPALTPGFPGIFPPSLYPRPPLLPPTPLLKSPLNHAQDAKLPSPLGNPALPLVSAVSN
                     SSQGATAATGSEEKFDGRLEDAYAEKVKNRSPDMSDGSDFEDINTTTGTDLDTTTGTG
                     SDLDSDLDSDRDKGKDKGKPVESKPEFGGASVPPGAMNSVAEVPAFYSQHSFFPPPEE
                     QLLTASGAAGDSIKAIASIAEKYFGPGFMSMQEKKLGSLPYHSVFPFQFLPNFPHSLY
                     PFTDRALAHNLLVKAEPKSPRDALKVGGPSAECPFDLTTKPKEAKPALLAPKVPLIPS
                     SGEEQPLDLSIGSRARASQNGGGREPRKNHVYGERKPGVSEGLPKVCPAQLPQQPSLH
                     YAKPSPFFMDPIYSRVEKRKVADPVGVLKEKYLRPSPLLFHPQMSAIETMTEKLESFA
                     AMKADSGSSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHL
                     RTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLK
                     KHEHEGAPVSQHSGVLTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRNFIANSEMN
                     QASTRMDKRPEIQDLDSNPPCPGSASAKPEDVEEEEEEELEEEDDDSLAGKSQEDTVS
                     PTPEPQGVYEDEEDEEPPSLTMGFDHTRRCVEERGGGLLALEPTPTFGKGLDLRRAAE
                     EAFEVKDVLNSTLDSEVLKQTLYRQAKNQAYAMMLSLSEDTPLHAPSQSSLDAWLNIT
                     GPSSESGAFNPINHL"
ORIGIN      
        1 acacacacac acatatgcta catgtgtgtt caaatataaa aacatgctaa cacatcacac
       61 atgtagttat atacataaac atgtacccac actgacaagt aggcacacag atgtacacat
      121 actaatgtct gagtgcagat gcccaggcac gcactctcgt ccacatgtgg ctttgcaaac
      181 atggatgcag ttcgtgtgag acactcccgc aaacacagta gtgtgtgagc gtgcacatcc
      241 acatgcaacg tcagagtgtg cccaaaatgc acacactcat gctcacatgt gcacataagc
      301 cctctttgtg cgagatctga gagcaggtgt tctctctcca ggcaggggtg aaagctgaag
      361 ggcctgcagc cgcaggaagg cggggcaggg cacagagacc ccgccccggt tacagctcca
      421 ggctaattgt ttgctttggc actgtgctcg ggatgctgcc tcataaactt aataatagct
      481 gccccccttt aatttgtttg accttgacga caataattta ttatatgcga tggagttctg
      541 ccttctttct ttttttcctc ctaattcata aacaaagctc tttggcctga cttccttctc
      601 tgctctgagg cagggcctcc ttgaatccac agtggccgct agggaggcag ggaggagcct
      661 gactttgctc agtgtttcca cgatggaggg atggggtcct cctgcgtggc ttcatctgtc
      721 ctgtgatctc tgcacccctg ggcagccagg acaagggctg gaaggaagct gaggacccca
      781 cattccgctg tgatgagtgt gatgagctct tccagtgcag gctggacctg aggcgccaca
      841 agaagtacgc gtgcagctct gcaggagccc agctctacga gggcctaggg gaggaactca
      901 agcccgaggg ccttggcgtg ggcagcgacg ggcaagcgca tgagtgcaag gattgcgagc
      961 ggatgttccc caacaagtac agcttggagc aacacatgat cgtccacacg gaagagcgtg
     1021 agtacaaatg tgaccagtgt cccaaggcct tcaactggaa gtccaacctc atccgccacc
     1081 agatgtctca cgacagtggc aagcgcttcg aatgtgaaaa ctgtgtcaag gtgttcacgg
     1141 accccagcaa cctccagcgt cacatccgct cacagcatgt cggtgcccgg gcccatgcct
     1201 gccctgactg tggcaagacc ttcgccacat cctctggcct caaacagcac aagcatatcc
     1261 acagcacggt gaagccattc atatgcgagg tctgccacaa gtcctacacg cagttctcca
     1321 acctgtgccg gcacaagcgg atgcacgccg actgcaggac gcagatcaag tgcaaggact
     1381 gtgggcagat gttcagcact acctcctccc tcaacaagca tcggagattc tgcgagggca
     1441 agaaccatta cacgcctggc agcatcttca ccccaggcct gcccttgacc cccagcccca
     1501 tgatggacaa gacaaaaccc tccccgaccc tcaaccacgg gggcctaggc ttcagcgagt
     1561 acttcccctc cagacctcat cctgggagcc tgcccttctc ggctgctcct ccggccttcc
     1621 ccgcactcac tccgggcttc ccgggcatct ttcctccatc cctgtaccca cgaccacctc
     1681 tgctacctcc cacgccgctg ctcaagagcc ccctgaacca cgcgcaggac gccaagctac
     1741 ccagcccgct gggaaaccca gccctgcccc ttgtctccgc ggtcagcaat agcagccagg
     1801 gtgccacagc ggccaccggg tcagaggaga aatttgatgg ccgcttggaa gacgcatatg
     1861 cggagaaggt caaaaatagg agccctgaca tgtcggatgg cagtgacttt gaggatatca
     1921 acaccacgac cgggacagac ttggacacta ccacgggcac ggggtcagac ctggacagcg
     1981 acctggacag tgacagagac aaaggcaagg acaaggggaa gccagtggag agcaaacctg
     2041 agtttggggg tgcatctgtg ccccctgggg ccatgaacag tgtggccgag gtaccggcct
     2101 tctactcaca gcattccttc ttcccgccac ccgaggaaca gctgctgacg gcctcgggag
     2161 ctgccggcga ctccatcaag gccatcgcgt ccatcgcgga gaaatacttc ggtcctggct
     2221 tcatgagcat gcaggagaag aagctgggct cactacccta ccactccgtg ttccccttcc
     2281 agttcctgcc taactttccc cactccctct acccctttac ggaccgagcc ctcgcccaca
     2341 acttgctggt caaggctgag ccaaagtcac cccgggatgc cctcaaggtg ggcggcccca
     2401 gtgcggagtg ccccttcgac ctcaccacca aaccaaaaga ggccaaaccc gccctgctcg
     2461 cacccaaggt ccccctcatc ccctcatctg gcgaggaaca gccactggac ctgagcatcg
     2521 gcagcagggc cagggcaagc cagaacggag gtggccgtga gccgcggaag aaccacgtct
     2581 acggtgaacg gaagccgggg gtcagcgagg ggctgcctaa ggtgtgccca gcacagctgc
     2641 cccagcagcc ctccttgcat tatgctaagc cttcaccgtt cttcatggat cccatctaca
     2701 gcagggtaga aaagcggaag gtggcagacc ctgtgggagt cctgaaagag aagtacctgc
     2761 ggccgtcccc acttctgttc cacccccaga tgtcagccat agaaaccatg acggagaagc
     2821 tggagagctt tgcagccatg aaggccgact caggcagctc cctgcagccc ctgcctcacc
     2881 acccgttcaa cttccgctcc ccacccccaa cgctctcgga tcccatcctc aggaagggga
     2941 aggagagata cacgtgcagg tactgtggca agatcttccc cagatctgca aatctcacaa
     3001 gacatctgag gacacacaca ggggagcagc catacaggtg caagtactgt gaccggtcat
     3061 tcagcatctc ctccaacctc cagcggcacg tgaggaacat ccacaacaaa gagaagccgt
     3121 tcaagtgcca tctgtgcaac cgctgcttcg ggcagcagac caacctagac cggcacctga
     3181 agaagcacga acacgagggc gcaccagtga gccagcactc cggggtgctc acgaaccacc
     3241 tgggcaccag cgcctcctcc cccacctccg agtcggacaa ccatgcactt ttagatgaga
     3301 aggaagattc ttacttctcc gagatccgaa acttcatcgc caacagcgag atgaaccagg
     3361 catccactcg aatggacaaa cggcctgaga tccaagacct ggacagcaac ccaccgtgtc
     3421 caggctcagc cagtgcaaag ccagaggacg tagaggagga ggaagaggag gagctggagg
     3481 aagaggatga tgacagctta gccgggaagt cacaggagga cacggtgtcc cccacacctg
     3541 agccccaagg agtctatgaa gatgaagagg atgaggaacc acccagcctg accatgggct
     3601 ttgaccatac ccggaggtgt gttgaggagc gaggaggcgg cctgttagct ttggagccga
     3661 cgccgacctt tgggaagggg ctggatctcc gcagagcagc tgaggaagca tttgaagtta
     3721 aagatgtgct taattccacc ttagattctg aggttttaaa acaaaccctg tacaggcagg
     3781 ctaagaacca ggcatatgca atgatgctgt ccctctctga agacactcct ctccacgccc
     3841 cctcccagag ctcactggat gcttggttga acatcacagg accctcgtca gagtccggag
     3901 cctttaaccc catcaaccac ctctgaggtc ctggaggccc cagggccaga gtccaaagcc
     3961 agggtaccag ctgcaggaga tggagaaggg gccagggagc agccccccac cctcaacacc
     4021 tccactttgc aaagtccagc ttctccattg aaactcagaa cccgaaggtc ccttgagtag
     4081 ccgctggcct tcatcacctc tcagaactgg cctcaaggac acgatctgca gtgggtgcgg
     4141 tgcacgggcc acccaggagc tgctcacagg agccatggat cagaaaactc gtgggcaagg
     4201 gtggggtctc tatcccagca ggagccagtt ggccacatcc aggcaactgc atggtatgaa
     4261 agaggaaatc ggaaagacgt gggcaagtgc tatggagaga gacctcatca atgattttta
     4321 taatgagaat cacatgatta agccttttgg taatcttatt gactatagag tctatttaag
     4381 catgtgggtt ttaaaaaaaa tagacggtat tttttaaaaa tcaaaaaaaa aaaaaaaaga
     4441 cttgcaaaat gtttttttaa aagtaatttt gcatcgcttt ggaatttcag cttattggca
     4501 aacccacacc tgccaggaca tcgagtacgg ctcgggtgtg ccctttataa tgtaaataat
     4561 ggagaatttt ttttctatct ctgacctgtt tgtataagcc aaggtgattc cagtgtgccc
     4621 gacacaggat aaggggcatg gagccactct gctaagtcag atgctgacta cacaagaatt
     4681 catggacgtg gtgcctggct gcaggtttgc agagggaggc caggagaaag aggtcgcctt
     4741 gccctgtgtg ctctgcagag gaatccacgg gtcccaccca agaccctccc caattgtatg
     4801 gggaagtcgg gagccagtgg ctcaggtctt ccatgctgga cacctaagga tcttcccctt
     4861 cagcagcagc actggccttg actgctgctc ttctgaaggc agggctctgg gccatgtgga
     4921 ggcctccagc cttctaccct ccccaaccct ggcaggctga tgccctcccc atggccactg
     4981 agtgtgggac gcctgcccac ctgctactcc actccaggac accaagcact acctgtgcct
     5041 aagactccag atcaatcaca cagtcgccac ttctgctctt tgtgtgggtt cctggtgaga
     5101 ataggacggg gacaggagga agatccaggg gacctgccac agcaaagaac agagacagta
     5161 cagaccccaa gaccggatgc ctcactcatt tgggacggtc agaacgtgtc tacttctctg
     5221 cttggatggg ctttaaatta tcccataggg gccaatttca aataatttct tttcctgatg
     5281 gaatttacct taatctgtat ataacttgta attttttttt ctaattcatt tctttcctta
     5341 ttttatttct tccttaacag tatttttggc attggacaac ttattctgaa gaaatgatgt
     5401 taatataagt atgtagtgaa ggaccaaacc gtgtgataag gttgtgtgct gtgtgatcgg
     5461 tacccaggga gcggggcggt gttaatgtgc caaatacccc tgtgtccctc cctccaggag
     5521 ttccacggtc accactgccc acttaccaga caatcatatg attttgttaa atttgagttt
     5581 cagttacatt ttaagacaag tgttctattt attttattgt ttggaaggag gggggcatat
     5641 cccaacaaga taagaaggaa cagagaccgc ctgggttgtc atttaaaact acaagagatt
     5701 gtgattgtgt gagcgtcagc aaactcggag cacgcgtgtc atgccgtggg cctgtcagcg
     5761 gttccctctg ggagcaactt aaacatccaa gcacagatct tttatatttg ctaaggccgt
     5821 tctgggacaa agaccgtcat ctttgctgat gctcagtggt ccaggctacg ctgggatccg
     5881 tgatggggat atcccagaag acaccattcc cctgcaggtt gcggtgaatc tcagtgacat
     5941 agcatggaac agtcagtcct gtgccgtgct cagaagcaca ctctcgagtg cacactggac
     6001 ggcctgaggc agcagggaca ctctgcagag gaacttgcca tggtccagtg gtaaggattc
     6061 gtaggtctaa ctgctcatgc ttctcatggg ttcgtgacat catctccatg gcgggccagg
     6121 cctcggcttg agaatcccag tttcctctag gtgggagcta gtcctgtgta agttcaacct
     6181 cagatataca tgccccactt ttgtaaaccc caaattatat gctttcttct cagaaagagc
     6241 aaggtgtgtg cttttttttt cccccgcggt atgactttct ctctccggta cggggagtct
     6301 atctggatgg ggatcttctg tggacctttt tgacagcagc agagcagcta aaggctccct
     6361 tctcatcctc tggcacgcac aacccctgtc catctctaac ccaagagtcc catctgtgct
     6421 gagttaaatg ctttgccccc acaaagtgat gattccaaac tcaggttatc ctgaacagtc
     6481 atccccttgg gcccagcact tggaatttga aggactccgt ccttgcttgc cacccccgac
     6541 aaagacagca cttgattttc tgcactgagt tccagatatt ctgcctctac tctgcattgc
     6601 cctcaaccag tgagctctgc ccacctggcg tctctgcagt cttaatagtg cccagctggc
     6661 tcaagcaagc atcagatcag gtacaggaga ccctctcaga gtcaggaagc tggaccaggt
     6721 gtgagttcaa aggtcttggc cactggagaa ccagaccatt aacttggctc tcttgcctgt
     6781 tgctgtgcag gatagagggg cagggcagag gttcagccac gattgtttcc caatgatact
     6841 ttccattgtt tgcacttgcc tcctcaaata gaaattcatt catcgggagg ccacctagct
     6901 tgcattccct ctagccccgg gcaaggccac acttaggccc tgtcattgct gccacaccta
     6961 ggatgatcag gtaggaaacg cagggcttca ctgtcctgca ggaaggtaga tcctgcatga
     7021 gtaagacccc gtacatccct gtgcaaaccc agggtgtaaa cctcagtaat gggagagcat
     7081 gacatggcca agcctgtggg gccctactct ccaaggccgg ggagagcagg taatctaccc
     7141 agacccagac tgacctgacc cctctgcctc ccagggtcca gacccagagc tcttggcttc
     7201 ctctccctca tctgcctcca cagtgagtgt ctgcgaagca cttgcttaaa tacatatcac
     7261 gtgttttaga ctcgaagctc aaagcactgg attgtggtcc ctgtccctgc ccaagtggct
     7321 gagacctact gagctgttca ctgtgccgtt cgaggtaggg aagaaaaggc ctccgagctg
     7381 ttgctgggac aggagggtgg agaggcctgg gacagacagc gctccctcct gccagtagac
     7441 actgggacat ccctgtccac ggagatcagc cgggtatcga aagccatgaa gactgtccct
     7501 agccctgagc gatactgtga caagacattc ttgaattctc cccagacaag gtcacttccc
     7561 ccaccattcc agccattgtc tgtctgtcac caattcacat cctcacttct aggaggggga
     7621 aaggttgagt ctttagatgt gcgattgatc cccttgcaac tgggggaagc tgggggtttc
     7681 ctcagtgtct cccacagcgc agctactctc ttcagtgtgg ggaaaggggg gccctggtgt
     7741 cagaatacgt aacttaaagc ctgtgcgtgt ggtggtgcgt ggtgtgtgtg tgtgtgcatg
     7801 tgtgctgtat gtgtgtactt tgaaccaata gtatataaat ataaatataa atatatatat
     7861 atatccctga cacccgcgag aatctccacc ctgtatgaga gttgccattg ttacattcag
     7921 atcggattca gttcgtttct gtttctgttt ttgttgttgt tgggtttttt tttttttcct
     7981 tttagaacta tatagtgttg agaaaggaat caaatgtaaa tgtctggttt ccatataacg
     8041 ttaaaaaaga aaattaaaaa accattaagg agggggctgg tgtctgccct gcccccttcc
     8101 ctgtaaattg ctgttgtgtt gataaagctg tgcatggctc gtgtttagcg gtcattattg
     8161 tgtctgtttg tggaattctt atgatgagga aaatcccgta gatgcactta ttgaatatgt
     8221 gattaggtct aagtcagggc caggagtccc aaaacgccca caagaaaaag ataaaaagaa
     8281 aaaaaaatgg accacagttc ctggtgacta tggaaatcgc cgtgagagaa tcgtgaatcg
     8341 agaagacgcg gcttgagaat agtcaaatgt gatttttttt tttttttttt ttttttgcag
     8401 atctcattct gaggcttatg gcaaagacaa atgtacttgt gtagaggttt ctgtgaggta
     8461 aaagccagga gggcctggct ttgaggtcaa tgctgtagaa taggactgac tggataccaa
     8521 atgtaatctt tccgatgcta caatgaattt atacacgaga ttgatatgca ataaatctgt
     8581 gtgtttttct aa
//
