LOCUS       NM_001085418            2162 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus PRAME like 5 (Pramel5), mRNA.
ACCESSION   NM_001085418 XM_001002146 XM_001472747 XM_987884
VERSION     NM_001085418.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2162)
  AUTHORS   Kaji K, Nichols J and Hendrich B.
  TITLE     Mbd3, a component of the NuRD co-repressor complex, is required for
            development of pluripotent cells
  JOURNAL   Development 134 (6), 1123-1132 (2007)
   PUBMED   17287250
REFERENCE   2  (bases 1 to 2162)
  AUTHORS   Bortvin A, Eggan K, Skaletsky H, Akutsu H, Berry DL, Yanagimachi R,
            Page DC and Jaenisch R.
  TITLE     Incomplete reactivation of Oct4-related genes in mouse embryos
            cloned from somatic nuclei
  JOURNAL   Development 130 (8), 1673-1680 (2003)
   PUBMED   12620990
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC052827.1.
            
            On Feb 5, 2010 this sequence version replaced NM_001085418.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC052827.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2162              BC052827.1         11-2172
FEATURES             Location/Qualifiers
     source          1..2162
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 77.98 cM"
     gene            1..2162
                     /gene="Pramel5"
                     /note="PRAME like 5"
                     /db_xref="GeneID:384077"
                     /db_xref="MGI:MGI:2156389"
     exon            1..85
                     /gene="Pramel5"
                     /inference="alignment:Splign:2.1.0"
     exon            86..395
                     /gene="Pramel5"
                     /inference="alignment:Splign:2.1.0"
     CDS             109..1611
                     /gene="Pramel5"
                     /codon_start=1
                     /product="preferentially expressed antigen in melanoma
                     like 5"
                     /protein_id="NP_001078887.1"
                     /db_xref="CCDS:CCDS51363.1"
                     /db_xref="GeneID:384077"
                     /db_xref="MGI:MGI:2156389"
                     /translation="MSFKDPPTLQQLARRSLLKDEALTISALLNLPVQLFPPLFKDAF
                     TSRQRKILSLMVAAWPFPVLPVGALGGIDHLETLKAVLDGLDLLMSQKDRPSRWNLQV
                     LDLGNAHQDFWDGWAGLLHEVCSQDVFGKNQPVGNHPIPGGKQTITIKMNLSLKYCRH
                     SKYLNYLHWWAEQRKDGIQVICEKLEFTGPHCPELRFLKFSFVASIQELAIKSIHWDI
                     YNLALIASCLGQMKNLQKLILMNIRRPPDLADLQEAHIVTEIFSEFSKLHKVHYLHVN
                     NVYFLKERLDQMLRCFERPLETLAITHCRLSELDMRYLSQCPSIHQLKYLDMSYTTFK
                     PSSHRFLGSLLERLTATLQTLKLECFHLTDFQIRDLLPGLSQCSQLTEVDIAMNEFSV
                     VSLKKLLKHTANLTQLTLEKYPAPVEVYDDGHSVISDRFVQLCSELMNTLKGVRQAKQ
                     VYFVSMPCLRNYEFLIYNLKGLDSSEQLRRRGLSWALINGEQVSRDSLQL"
     exon            396..977
                     /gene="Pramel5"
                     /inference="alignment:Splign:2.1.0"
     exon            978..2147
                     /gene="Pramel5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccctgtggga ctgagcaact gttagatcct tggacttcca ttcacagcta ctactgggac
       61 atcgttgtga attgggctgc agactcatca gcctacctga aagctacaat gagcttcaag
      121 gacccaccaa cactccagca gctggcaaga agaagcctgc tgaaagatga agccttgacc
      181 atctctgctc tgctgaacct gcctgtgcaa ctcttcccac cactcttcaa ggatgcattc
      241 accagcagac aacgtaagat cctgagcctg atggtggcag catggccctt cccagtcctt
      301 cctgtgggag ctctgggtgg gattgatcac ctggagaccc tgaaagctgt actagatggc
      361 cttgatttgc tgatgtcaca aaaggatcga cctagcaggt ggaacctaca agtgcttgat
      421 ttgggaaatg cccaccagga cttctgggat ggttgggctg gactacttca tgaagtctgc
      481 tctcaagatg tctttggcaa gaaccaacca gtgggaaatc atcccatccc aggggggaaa
      541 cagaccataa ctataaaaat gaatctttcc ctcaagtact gccgacattc taaataccta
      601 aactatttgc attggtgggc cgagcagaga aaagatggga tacaggtgat ctgtgagaag
      661 ctggagttta cgggccctca ctgtcccgaa ctgaggttct tgaagttttc ttttgtagcc
      721 tcaatccagg aattggcaat aaagtccata cactgggata tatataacct tgcattgata
      781 gcctcttgcc tgggccagat gaaaaacctc cagaaactca ttctcatgaa catcaggaga
      841 cctcctgacc ttgcagacct acaggaagcc catattgtta cagagatctt ttctgagttc
      901 tccaaactgc ataaggttca ctatctccat gtgaataatg tctacttcct gaaagaacgc
      961 ctggaccaaa tgctcaggtg ctttgagcgt ccattagaga cccttgctat cactcattgc
     1021 aggctttcag aattagacat gaggtatctg tcccagtgtc caagcatcca tcagctcaaa
     1081 tacctggaca tgagttacac caccttcaag ccttcaagtc atcgatttct aggaagccta
     1141 ctagaaagac tgacagctac tctgcagaca ttaaaattgg agtgctttca cctcacggac
     1201 ttccaaatcc gtgaccttct gcctgggctg agccagtgtt cccagctcac tgaagttgat
     1261 attgcgatga atgaattttc cgtggtcagc ctgaagaagc tgctgaagca tacggccaac
     1321 ctcacacagc tgaccctgga gaagtaccct gcccctgttg aagtctatga tgacggtcat
     1381 agtgttattt cagacagatt tgtacaactt tgttctgagc ttatgaacac actcaagggt
     1441 gtaaggcagg caaagcaggt ctattttgtg agtatgccgt gtttacgtaa ttatgaattc
     1501 ctcatttata atttgaaggg cctggattct tctgagcaat taagaaggag aggtctttcc
     1561 tgggctctga taaatggaga gcaggtctca agagactcat tacagttata gaacatatgt
     1621 attcaagcat tttcggatgt actttggaaa gataattatt tcattttctt tgaatgtcag
     1681 tcaaattctt ctgatttgag gtagttgtgt tgagatggaa aatcatgagc ttattttcag
     1741 cctaatgtct acagtacaga caaacccttg aacagcaatt atatctgaaa attgtagggg
     1801 ttcattccag cactttctga gtatgaggga ccctagaagt agggaagggg ataaagagtg
     1861 aggacattat aaagatcata atggacttga ataggaggtc tctgtttcat tctccctgca
     1921 gatggcatcc acctttttgc tctcccctta ctgttctaca gtatatggac ttatttttat
     1981 ggagtataag tctgactgaa ccttggagta tttttgtatt agactgttat cactattaag
     2041 ctgtatctct ttcttgggga ggtccagtag cctgctatta tcttctacca ccactgttac
     2101 cattataatt tctcataggt tctaataaat ctgttttgaa taagcaaaaa aaaaaaaaaa
     2161 aa
//
