LOCUS       NM_001378724            2221 bp    mRNA    linear   ROD 09-SEP-2021
DEFINITION  Mus musculus PRAME like 44 (Pramel44), mRNA.
ACCESSION   NM_001378724
VERSION     NM_001378724.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Hermes N, Kewitz S and Staege MS.
  TITLE     Preferentially Expressed Antigen in Melanoma (PRAME) and the PRAME
            Family of Leucine-Rich Repeat Proteins
  JOURNAL   Curr Cancer Drug Targets 16 (5), 400-414 (2016)
   PUBMED   26694250
  REMARK    Review article
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC124589.5.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849384
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on single protein-coding
                                         transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-179               AC124589.5         15022-15200
            180-354             AC124589.5         24350-24524
            355-645             AC124589.5         35950-36240
            646-960             AC124589.5         52599-52913
            961-1551            AC124589.5         53378-53968
            1552-2221           AC124589.5         54793-55462
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5"
     gene            1..2221
                     /gene="Pramel44"
                     /gene_synonym="624507; Gm42117; Gm6509"
                     /note="PRAME like 44"
                     /db_xref="GeneID:108169097"
                     /db_xref="MGI:MGI:3779602"
     exon            1..179
                     /gene="Pramel44"
                     /gene_synonym="624507; Gm42117; Gm6509"
                     /inference="alignment:Splign:2.1.0"
     exon            180..354
                     /gene="Pramel44"
                     /gene_synonym="624507; Gm42117; Gm6509"
                     /inference="alignment:Splign:2.1.0"
     exon            355..645
                     /gene="Pramel44"
                     /gene_synonym="624507; Gm42117; Gm6509"
                     /inference="alignment:Splign:2.1.0"
     CDS             599..2119
                     /gene="Pramel44"
                     /gene_synonym="624507; Gm42117; Gm6509"
                     /codon_start=1
                     /product="uncharacterized protein LOC108169097"
                     /protein_id="NP_001365653.1"
                     /db_xref="GeneID:108169097"
                     /db_xref="MGI:MGI:3779602"
                     /translation="MLGGLYVLFTHEFQLRILLIGDLKKMNVHTPPILQKLAIQTLVR
                     EQALGMSDLEEMAHGLFPALFKEAIDGRYIKLIKALVIAWPFHCLPVGALMRTTDLET
                     LQAVLDGVDIRRTIGFHPRRKKLQFLDLRNVHHSFWNIWTDSEDSDYSAEILDEKKAL
                     QVRPRYALRQRLKVTVDLCIRSCLDEAQTWFLKWAQERKGSLYFCCTKMKIWTLPVKA
                     LRHIFHVFDPEHIMELELNTEWTLLELTRFAPYFGQMRNLHKVFLAPLHKIDFHLPNR
                     TRVTEVKCINKFASQFSKFNCLQHLFMFCVHFLRSQMNQVLGCLMTPLKTLSITYSLV
                     SQRDLDSFACCQSLFQLKHLELRGVVLLDLDLMPLRGLLMKVAGILETLDLQGCRMKD
                     SQLSVLLPAFKQCSQISNINFYNNEFSMPFPKDLLQHTANWSKMNVEQYPAPLECYDE
                     FAQVSVERFAQVCQDLMDTLRAIRQPKNSSFATDICHTCGERWVFDQVANLCHCWQ"
     exon            646..960
                     /gene="Pramel44"
                     /gene_synonym="624507; Gm42117; Gm6509"
                     /inference="alignment:Splign:2.1.0"
     exon            961..1551
                     /gene="Pramel44"
                     /gene_synonym="624507; Gm42117; Gm6509"
                     /inference="alignment:Splign:2.1.0"
     exon            1552..2221
                     /gene="Pramel44"
                     /gene_synonym="624507; Gm42117; Gm6509"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaccatgctt ctcttgtggt ggctgtggtg ggcggtaact tagggagggg tcagagttcc
       61 aggaccatga gggaatgcct aacatgtcat gaaggtgaat tatgaccatc ggggttcaga
      121 cctcagctca actggatact agcctgcaat ttcccacagt gacatcctca ttgagtcctg
      181 ttccttgtga cacccttgaa gaccctctcc attagttact ccctaatttc acagagagac
      241 ctggattcct gctcctgctg tcagatcctc tttcagctaa aacatctggg attgagaggt
      301 gtggttttac tggattttga tcttatggct ctgagatgtc tcctcatgaa agtgaaccaa
      361 tcaggatggc agttcatggt ccaccccaat tcctggagct gataaggaag aaggcactga
      421 agtatgagac cttggttgtc tctggagaaa ttgctcattg atcttctccc agcactgttc
      481 aaggaggctt tcactgatag attcactaag gttgtgaagg ctatggtgtc agcatggcct
      541 tccatcttct ttcctgtggt gccttgatat acaggctcga gaaggcaata tttcaggtat
      601 gctgggtgga ttatatgtcc tatttacaca tgaatttcaa ctcaggatcc ttctgattgg
      661 agaccttaag aagatgaatg ttcatacccc acccatactc cagaagctgg caattcagac
      721 tctggtgaga gagcaggctc taggcatgtc tgatctggag gagatggccc atggactctt
      781 cccagcactt ttcaaggagg ccattgatgg cagatatatc aagctcataa aggcattggt
      841 tatagcctgg cctttccact gtctccctgt gggggcattg atgaggacta ctgacctgga
      901 aacattgcag gctgtgctag atggagtaga cattcgtcga accatagggt ttcaccccag
      961 gaggaaaaaa ctacagtttc tcgacctgag gaatgtgcac catagcttct ggaacatatg
     1021 gactgattca gaagacagtg actattcagc agagatcttg gatgaaaaga aagccctgca
     1081 ggtccgtccc agatatgcac tgaggcagcg tctgaaggtc acagttgacc tgtgcatcag
     1141 gtcctgcctt gatgaagcac aaacatggtt cttgaagtgg gcccaggaga gaaagggctc
     1201 cctatatttc tgctgtacaa agatgaaaat ctggactctg ccagtaaaag ctctcagaca
     1261 tatcttccac gtttttgatc cagagcacat catggagtta gaactaaata ctgaatggac
     1321 tctgttagag ttgacacgtt ttgcccccta ttttgggcag atgagaaatc ttcacaaagt
     1381 cttcctggca cccctccaca aaatcgactt ccatttaccc aatagaacaa gagtcaccga
     1441 agtcaagtgt atcaacaagt ttgcttctca gttctccaaa ttcaactgtc tgcagcatct
     1501 tttcatgttc tgtgtccatt ttctcagatc ccagatgaat caggtcctag ggtgcttgat
     1561 gacacccttg aagaccctct ccattactta ctccctggtt tcacagagag atttggattc
     1621 ctttgcctgc tgtcagagcc tctttcagct aaaacatctg gaattgagag gtgtggtctt
     1681 actggatttg gatcttatgc ctctgagggg tctcctcatg aaagtggcag gcattcttga
     1741 gactctggat ttgcaggggt gtagaatgaa ggactcccag ctcagtgtcc tcctacctgc
     1801 attcaaacaa tgctctcaga tctccaatat caacttctac aacaatgaat tctccatgcc
     1861 cttcccgaag gaccttttgc agcacacagc caactggagc aagatgaatg tggaacaata
     1921 ccctgcccct ctggagtgct atgatgaatt tgctcaagtc tctgtagaaa gatttgccca
     1981 agtttgtcag gatctcatgg atacactgag agcaataagg cagcccaaga acagctcctt
     2041 tgctacagat atctgccaca catgtgggga gcgctgggtc tttgaccagg tggccaacct
     2101 ttgtcattgc tggcagtaaa atgggaacat tctggattgg aataaaaata aggtttggga
     2161 cacatgtctt accaaaaaaa attgtatttt ccatcttcat ttgtaataaa aagaacagag
     2221 a
//
