LOCUS       NM_001001319            2409 bp    mRNA    linear   ROD 13-AUG-2022
DEFINITION  Mus musculus PRAME like 4 (Pramel4), transcript variant 1, mRNA.
ACCESSION   NM_001001319 XM_142607
VERSION     NM_001001319.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Madissoon E, Tohonen V, Vesterlund L, Katayama S, Unneberg P,
            Inzunza J, Hovatta O and Kere J.
  TITLE     Differences in gene expression between mouse and human for
            dynamically regulated genes in early embryo
  JOURNAL   PLoS One 9 (8), e102949 (2014)
   PUBMED   25089626
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Tang F, Barbacioru C, Nordman E, Bao S, Lee C, Wang X, Tuch BB,
            Heard E, Lao K and Surani MA.
  TITLE     Deterministic and stochastic allele specific gene expression in
            single mouse blastomeres
  JOURNAL   PLoS One 6 (6), e21208 (2011)
   PUBMED   21731673
REFERENCE   3  (bases 1 to 2409)
  AUTHORS   Kaji K, Nichols J and Hendrich B.
  TITLE     Mbd3, a component of the NuRD co-repressor complex, is required for
            development of pluripotent cells
  JOURNAL   Development 134 (6), 1123-1132 (2007)
   PUBMED   17287250
REFERENCE   4  (bases 1 to 2409)
  AUTHORS   Bortvin A, Eggan K, Skaletsky H, Akutsu H, Berry DL, Yanagimachi R,
            Page DC and Jaenisch R.
  TITLE     Incomplete reactivation of Oct4-related genes in mouse embryos
            cloned from somatic nuclei
  JOURNAL   Development 130 (8), 1673-1680 (2003)
   PUBMED   12620990
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB838827.1, AK145585.1 and BY383853.1.
            
            On Dec 1, 2017 this sequence version replaced NM_001001319.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK145585.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1                 BB838827.1         2-2
            2-2400              AK145585.1         2-2400
            2401-2409           BY383853.1         400-408
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 77.98 cM"
     gene            1..2409
                     /gene="Pramel4"
                     /gene_synonym="D4Ertd792e"
                     /note="PRAME like 4"
                     /db_xref="GeneID:347710"
                     /db_xref="MGI:MGI:2156377"
     exon            1..103
                     /gene="Pramel4"
                     /gene_synonym="D4Ertd792e"
                     /inference="alignment:Splign:2.1.0"
     exon            104..413
                     /gene="Pramel4"
                     /gene_synonym="D4Ertd792e"
                     /inference="alignment:Splign:2.1.0"
     CDS             127..1629
                     /gene="Pramel4"
                     /gene_synonym="D4Ertd792e"
                     /note="isoform 1 is encoded by transcript variant 1;
                     preferentially expressed antigen in melanoma like 4"
                     /codon_start=1
                     /product="preferentially expressed antigen in melanoma
                     like 4 isoform 1"
                     /protein_id="NP_001001319.2"
                     /db_xref="CCDS:CCDS18900.1"
                     /db_xref="GeneID:347710"
                     /db_xref="MGI:MGI:2156377"
                     /translation="MSFKDPPTLQQLARRSLLKDEALTISALPNLPVQLFPPLFKDAF
                     TSRQRKILSLMVATWPFPVLPVGALCGIDHLETLKAVLDGLDLLMSQKDRPSRWNLQV
                     LDLRDAHQDFWDGWAGLLHEVCSQDVFGKNQPVGNHPIPGGKQTISIKMNLSLKYCRR
                     HSHCENLNYLYYWAKQRKDVIQVIFEKLEFTGKHCLRLKLWRLLKLSFVASIQELTIK
                     SIHWDIYNLALIASCLGQMKNLQKLILMNIRRPSSLTDLQEARIITEIFSEFSKLHKL
                     QHLYVNDVYFLKERLDLMLRCFERPLETLTITYCKLSESDMRYLSQCPSIHQLKYLDM
                     SYTTFKPSSHRFLGFLGSLLERLTATLQTLKLECFHLTDSRIRDLLPGLSQCSQLTEV
                     DFVENKFSMVSLKTLLQHTANLTQLTLEKYPAPDEVYDDSLCVIPDRFVQLCSELMNT
                     LKGVRQPKQVYFESTIYSPNFEYLVYNLEGMVSSEPLRRRGRGMVIYISG"
     exon            414..1013
                     /gene="Pramel4"
                     /gene_synonym="D4Ertd792e"
                     /inference="alignment:Splign:2.1.0"
     exon            1014..2409
                     /gene="Pramel4"
                     /gene_synonym="D4Ertd792e"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cagtcttttg cctgcttgcc ctgtgggact gagcgactgt tagatccttg gacttccatt
       61 cacagctact actgggacat cgttgtgaat tggactgcag actcatcagc ctacctgaaa
      121 gctacaatga gcttcaagga cccaccaaca ctccagcagc tggcaagaag aagcctgcta
      181 aaagatgaag ccttgactat ctctgctctg ccgaacctgc ctgtgcaact cttcccacca
      241 ctcttcaagg atgcattcac cagcagacaa cgtaagatcc tgagcctgat ggtggcaaca
      301 tggcccttcc cagtccttcc tgtgggagct ctgtgtggga ttgatcacct ggagaccctg
      361 aaagctgtac tagatggcct tgatttgctg atgtcacaaa aggatcgacc tagcaggtgg
      421 aacctacaag tgcttgattt gcgagatgcc caccaggact tctgggatgg ttgggctgga
      481 ctacttcatg aagtctgctc tcaagatgtc tttggcaaga accaaccagt gggaaatcat
      541 cccatcccag gggggaaaca gaccataagt ataaaaatga atctttccct caagtactgc
      601 cgacgacact ctcattgtga aaacctaaac tatttgtatt attgggccaa gcagagaaaa
      661 gatgtgatac aggtgatctt tgagaagctg gagtttacag gcaagcactg tctccgactg
      721 aagttgtggc ggttgttgaa gttgtctttt gtagcctcaa tccaggaatt gacaataaag
      781 tccatacact gggatatata taaccttgca ttgatagcct cttgcctggg ccagatgaaa
      841 aacctccaga aactcattct catgaacatc aggagacctt cttcccttac ggacctacag
      901 gaagcccgta ttattacaga gatcttttcc gagttctcca aactgcataa gctccagcat
      961 ctctatgtga atgatgtcta cttcctgaaa gaacgcctgg acctaatgct caggtgtttt
     1021 gagcgtccat tagagaccct tactatcact tattgcaagc tttcagaatc agacatgagg
     1081 tatctgtccc agtgtccaag catccatcag ctcaaatacc tggacatgag ttacaccaca
     1141 ttcaagcctt caagtcatcg atttctagga tttctcggaa gcctactaga aagactgaca
     1201 gctactctgc agacattaaa attggagtgc tttcacctca cggactcccg aatccgtgac
     1261 cttctgcctg ggctgagcca gtgttcccag ctcactgaag tcgattttgt ggagaacaaa
     1321 ttttccatgg tcagcctgaa aacgctgctg caacatactg ccaacctcac acagctgacc
     1381 ctggagaagt accctgcacc tgatgaagtc tatgatgaca gtctttgtgt tattccagac
     1441 agatttgtac aactttgttc tgagcttatg aacacactca agggtgtaag gcagccaaag
     1501 caggtctatt ttgagagtac aatatattca cctaattttg aatacctcgt gtataatttg
     1561 gagggcatgg tatcttctga gcctttaaga aggagaggtc gtgggatggt gatatatatc
     1621 agtgggtagg aacacccgac tgctcttccg aaggttagaa gttcaaatcc cagcacccac
     1681 atggtggctc acaaccatcc atagcaagat ctgactccct cttctggatt gtctgaagac
     1741 agctacagtg tacttacata taataaataa atgaatcttt aaaaaggaaa aaaaaattaa
     1801 aaaaaaaagg agaggtcatt gctgggctct gataaatgga gggcaggtct caagagattc
     1861 attagagtta tagaacatat gtattcaagc attttggaat gtacttttgg aaagataatt
     1921 atttcatttt ctttgaatgt cagtcaaatt cttctgattt gaggtagttg tgttgagatg
     1981 gaaaaccatg accttatttt cagcctaatg tctacagtac agacacaccc tttaacagca
     2041 attgtatctg aaaattgtag ggctgcattc cagcactgtc tgagtatgag ggacactaga
     2101 agtagggaag gggataaaga gtgaggacat tataaagatc ataatggact tgaataggag
     2161 gtctctgttt cattctccct gcagatggca tccacctttt ggctctcccc ttactgttct
     2221 agagtatatg gatatatttt tatgaagtat aaatctgact aaacttggag tacttttgta
     2281 ttagactgtt atcactatta agctgtatct ctttcttggg gaggtccagt agcctgctat
     2341 tatcttctac caccactgtt accattataa tttctcatag gttctaataa atctgttttg
     2401 aataagcaa
//
