LOCUS       NM_001005371            1812 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus PRAME like 26 (Pramel26), transcript variant 1, mRNA.
ACCESSION   NM_001005371 XM_355531
VERSION     NM_001005371.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1812)
  AUTHORS   Tang F, Barbacioru C, Nordman E, Bao S, Lee C, Wang X, Tuch BB,
            Heard E, Lao K and Surani MA.
  TITLE     Deterministic and stochastic allele specific gene expression in
            single mouse blastomeres
  JOURNAL   PLoS One 6 (6), e21208 (2011)
   PUBMED   21731673
REFERENCE   2  (bases 1 to 1812)
  AUTHORS   Dade S, Callebaut I, Mermillod P and Monget P.
  TITLE     Identification of a new expanding family of genes characterized by
            atypical LRR domains. Localization of a cluster preferentially
            expressed in oocyte
  JOURNAL   FEBS Lett 555 (3), 533-538 (2003)
   PUBMED   14675769
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL626771.9.
            
            On May 20, 2022 this sequence version replaced NM_001005371.3.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC080785.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-75                AL626771.9         121406-121480
            76-386              AL626771.9         124608-124918
            387-947             AL626771.9         125441-126001
            948-1812            AL626771.9         126642-127506
FEATURES             Location/Qualifiers
     source          1..1812
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 77.97 cM"
     gene            1..1812
                     /gene="Pramel26"
                     /gene_synonym="Gm13084"
                     /note="PRAME like 26"
                     /db_xref="GeneID:381569"
                     /db_xref="MGI:MGI:3650237"
     exon            1..75
                     /gene="Pramel26"
                     /gene_synonym="Gm13084"
                     /inference="alignment:Splign:2.1.0"
     exon            76..386
                     /gene="Pramel26"
                     /gene_synonym="Gm13084"
                     /inference="alignment:Splign:2.1.0"
     CDS             100..1530
                     /gene="Pramel26"
                     /gene_synonym="Gm13084"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="oogenesin-like isoform 1"
                     /protein_id="NP_001005371.3"
                     /db_xref="CCDS:CCDS38948.1"
                     /db_xref="GeneID:381569"
                     /db_xref="MGI:MGI:3650237"
                     /translation="MNFYSPPTLMELAIQRLLRDEYLAISALKDLPNMMFPVMFKEAF
                     IDGRTKILTAMIPVWPFPYLSVGTMLKNLNLDTLKAVLEGIDILISKPVLSSRCKLRE
                     ITLSHDLVVVWAGSHEVEGLPEFMEQEKPVENSPGYGTKNKLKVTTELQFMEGHLDEC
                     STYLLQWAYQREDSIHLHCRKLKIYGLTKATVIEMFKIVHAEYIEDLELSCLCLEDLD
                     FLNPYLKQMSNLLSLTLDEIIYTLNIDDYRNINEEKVITVISHLPTFHHLQELYVHGV
                     IFIECLRCLRKPLEVLSFTDCDLSQSDLDYLPYCLNIFELRSLHLTDVRLSNLLLEPL
                     GFLLERVRHTLKSLQLMSCEMGETHFNALLPALSQCYQLTVVNFYGNELSLLFLKKLL
                     HHTAKLSQLADELYPAPQECYDNRDVVLSHRLEHFCSELLDILRAIREPKKVTFGTIK
                     CSKCGGSYVYDLETQCCFFEKNPPWA"
     exon            387..947
                     /gene="Pramel26"
                     /gene_synonym="Gm13084"
                     /inference="alignment:Splign:2.1.0"
     exon            948..1812
                     /gene="Pramel26"
                     /gene_synonym="Gm13084"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gatcagtttt tgaaaccggg agttgcagct ttcccctgcc tgaatatgat gatgtgtaac
       61 cattgtccag atcaacatga ctctttagaa gaagacagaa tgaatttcta ctcgccaccc
      121 actctgatgg agctagcaat acagcgtcta ctgagggatg agtacttggc catttctgct
      181 ctcaaggacc tgcccaatat gatgttccca gtgatgttta aggaggcatt tattgatgga
      241 cgtacaaaga tcttgaccgc catgatacct gtgtggccct tcccatacct ttctgtagga
      301 acgatgctga agaacctcaa cttagacact ttgaaggctg ttcttgaggg gatagatata
      361 ctgatttcaa aaccagttct ttccagtagg tgcaagctca gagagatcac tttgagccat
      421 gatttggttg tggtatgggc tggatcccat gaagtcgaag gcttaccaga gttcatggaa
      481 caggagaagc cagttgagaa tagtcctggc tatgggacaa agaacaaatt gaaagtgaca
      541 acagaactcc aattcatgga gggccacctt gatgaatgtt ccacttactt gttgcagtgg
      601 gcctaccaga gagaagattc cattcatcta cactgtagaa agctgaaaat ttatggctta
      661 accaaagcca cagtcataga aatgttcaaa attgtacatg cagaatatat agaagatctg
      721 gaactatctt gtctttgcct agaagatttg gattttctta atccctacct gaaacagatg
      781 agcaatctac tctcactcac actagatgag atcatatata ccctcaatat agatgattat
      841 agaaatatta atgaggaaaa agtgattaca gtgatttctc atcttcctac attccaccat
      901 ctccaggaac tctatgtaca tggtgtcatt tttatagaat gtctcaggtg cctaaggaag
      961 cccttggagg tactttcgtt cactgactgt gacctctcac agtcagactt ggattacctc
     1021 ccctattgcc tgaatatttt tgagctcaga tctctccacc tgactgatgt acgtttaagt
     1081 aatttacttc ttgagcccct tgggtttctc cttgagagag ttagacatac cctgaaatcc
     1141 ctgcaattaa tgtcatgtga aatgggggaa actcacttca atgccctgct gcctgcccta
     1201 agtcaatgtt accagctcac agtagttaat ttctatggta atgaactctc tctgcttttc
     1261 ctgaaaaaac ttctacacca cacagccaag cttagccagc tagctgatga gctgtaccct
     1321 gcccctcagg agtgctatga taacagggat gtagtactat cacacagatt agaacatttt
     1381 tgttctgagc tcctggatat actcagggcc ataagagagc ccaagaaagt cacctttggt
     1441 acaatcaaat gctccaagtg tggtgggtcc tatgtttatg atctggagac ccaatgttgc
     1501 ttttttgaaa agaaccctcc ctgggcttga ttttggaaga gaaaaatggt agcatactat
     1561 tgggaattga tatcctaagt gaatgtccct tgctggaagg agcatagatg tgtcaaccac
     1621 ctaaatgtct gagacacact gaaaagaaag gaatgtcctc agagctggta aagagtattg
     1681 catctataaa agatgttaag cactatttta ttctctagga ttattgtagt ttgtgtgtgt
     1741 tacaatacag gcatccttgc atgaaaatgt tgttcccgtc tgttgactgc atacaataaa
     1801 tgtgttgact tt
//
