LOCUS       NM_001406699            2152 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus PRAME like 16 (Pramel16), transcript variant 2, mRNA.
ACCESSION   NM_001406699
VERSION     NM_001406699.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2152)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL928630.15.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR17253012.307502.1,
                                           SRR17253011.10094097.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-102               AL928630.15        24152-24253         c
            103-399             AL928630.15        15184-15480         c
            400-990             AL928630.15        14118-14708         c
            991-2152            AL928630.15        12678-13839         c
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 77.98 cM"
     gene            1..2152
                     /gene="Pramel16"
                     /gene_synonym="Gm13109; Pramef25"
                     /note="PRAME like 16"
                     /db_xref="GeneID:329984"
                     /db_xref="MGI:MGI:3649968"
     exon            1..102
                     /gene="Pramel16"
                     /gene_synonym="Gm13109; Pramef25"
                     /inference="alignment:Splign:2.1.0"
     exon            103..399
                     /gene="Pramel16"
                     /gene_synonym="Gm13109; Pramef25"
                     /inference="alignment:Splign:2.1.0"
     CDS             113..1558
                     /gene="Pramel16"
                     /gene_synonym="Gm13109; Pramef25"
                     /note="PRAME family member 25"
                     /codon_start=1
                     /product="pramel family member"
                     /protein_id="NP_001393628.1"
                     /db_xref="GeneID:329984"
                     /db_xref="MGI:MGI:3649968"
                     /translation="MSFQDPPTLLSLAVQSLVKNEALAINALQELPRELFPPLFKAAF
                     TGRHTKILKEMVGSWPLLCLPVGALMNVPDMSILQAVLDGVDMQLTGNFHPRKRKLQV
                     LDLRNVHHHFWDVSAGPEDGDGSAETVCQKQKATRPHRYALRRRLKVVTDLCLQFDLE
                     EHQTYFLQWAQERRCSLNLCCVKMQIRELPIHTVRKILQIFQPYCIEELELNTGWTLS
                     TLACFTPCLGQMKNLRKLHLTLVHEKLFTFLRTSTDIQEKSVTKFISQFSKLNSLQHL
                     NLTGLYFLTGHINELLGCLKTPLEFLSIALCKYSQSDMESFAQCQSLHHLKHLHLAGI
                     ILHDLSLVPLGIFLENVANTLKTLELEHCRMTDSQVSAFIPALNKCSQLIEVNFCDND
                     ISTSVLMNLLHHTANLSQLIMELYPAPLECYETGFVLRAERFVQLSSELMNILCTVRQ
                     PHSICFASQLCLICSQRCTYGLETRLCHCCQ"
     exon            400..990
                     /gene="Pramel16"
                     /gene_synonym="Gm13109; Pramef25"
                     /inference="alignment:Splign:2.1.0"
     exon            991..2152
                     /gene="Pramel16"
                     /gene_synonym="Gm13109; Pramef25"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcttcttcgc ctgcttgctg tgtgagactg attaactgct tgatccttgg acttccattc
       61 acagctgcga ctgaaccatt gttgggaatt gggctgctga ctattcatca ggatgagctt
      121 ccaggatcca cccacactcc tgagcttggc agtacagagc ctagtgaaga atgaagcctt
      181 ggccatcaat gctctgcagg agctgcccag ggagttgttc ccaccactct tcaaggcagc
      241 cttcactggc agacacacga agatactgaa ggaaatggtg ggatcctggc ctttactttg
      301 cctccctgtg ggggcactga tgaatgtccc tgacatgtca atattgcaag ctgtgctgga
      361 tggtgtagac atgcagctga caggaaattt tcacccaaga aagaggaagc ttcaagtgct
      421 ggacctgaga aatgtgcacc atcacttctg ggatgtttca gctggaccag aggatggaga
      481 cggctcagca gagacagtgt gtcaaaagca gaaagcaaca cgccctcata gatatgcact
      541 gaggcgacgt ttaaaggtgg tcactgacct ttgccttcag tttgatctag aggaacatca
      601 aacttacttc ttgcagtggg cacaggagag aagatgttcc ctgaacctgt gctgtgtgaa
      661 gatgcaaatt agggaattgc ctattcacac tgtcaggaag atcttgcaga ttttccaacc
      721 atattgcatt gaagagttgg aattgaatac aggctggact ctgtccacac tggcatgctt
      781 cacaccttgc cttggtcaga tgaagaatct tcgtaaactc catctaacac tagtccacga
      841 gaaactcttc acttttctac gtacgtcaac agacatacag gagaagagtg tcaccaagtt
      901 catttctcag ttctccaaac tcaacagtct ccagcatctc aacctgactg gcctctactt
      961 tctcactggc cacataaatg aattgctcgg gtgtctgaag actccgctgg agttcctgtc
     1021 aattgctctc tgcaagtact cacagtcaga catggagtcc tttgcccagt gtcagagtct
     1081 ccatcatctc aaacacttgc atttggcagg tatcattttg catgatctga gtcttgtgcc
     1141 tcttgggatt ttcctagaaa acgttgcaaa cactctgaag accttggaac tagaacattg
     1201 taggatgaca gactctcagg tcagcgcttt tatccctgcc ctgaataagt gctctcagct
     1261 catcgaggtc aacttctgtg acaatgacat ctccacgtct gtcctaatga accttctgca
     1321 tcacacagcc aacctaagcc agctgatcat ggagctttat cctgctcctc tggagtgcta
     1381 tgaaaccggt tttgttctta gagcagagag atttgtccag ctttcttctg agctcatgaa
     1441 catactttgc actgttaggc agccccactc tatctgtttt gcctctcagt tatgccttat
     1501 atgttcacag cgctgtacat atggtctgga gaccagactt tgccattgtt gccagtaaat
     1561 aggaggagga ttcgtttggt aactgagaaa tgaaagtcta aggacaagtc tatgatcaag
     1621 gggttcctga acacatgtct tctgacattg atcattgtat tggagacaaa ggggctgact
     1681 gtgacatcta gagagtggac gtgtgaggag aaatgactaa tggaatcata tagttgtgca
     1741 tttcaaaacg tggatttgtc caggaataga tgggaacggt gtgttctctc tctaaaggat
     1801 attcttccag tctttctttc tacttaacag tgtcatatta gcccatgctg gacttgaact
     1861 catgcttttc tcttctccat gattgctgaa gtcactgata aatgccacca tgctcagctt
     1921 gcatgcaagc aacctcactg gaggatgcta ttcattaggg ctcccaagct ctgttggcca
     1981 cctatatata aagatctcta ggagatagac aagtctctgt cctcccctga aggattgcat
     2041 tataaatgtc cagtggggaa ctctattttg ttcctgattc ctggacctag ccattgtgtt
     2101 tctttgtgtc tgaataatca tgtagcaata aacaataata acaataatac ca
//
