LOCUS       NM_001406740            2466 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus PRAME like 11 (Pramel11), transcript variant 1, mRNA.
ACCESSION   NM_001406740 XM_017320084
VERSION     NM_001406740.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2466)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL626771.9.
            
            On May 20, 2022 this sequence version replaced XM_017320084.1.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-343               AL626771.9         39518-39860
            344-931             AL626771.9         40184-40771
            932-2466            AL626771.9         41591-43125
FEATURES             Location/Qualifiers
     source          1..2466
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 77.98 cM"
     gene            1..2466
                     /gene="Pramel11"
                     /gene_synonym="Gm13099; Pramef6"
                     /note="PRAME like 11"
                     /db_xref="GeneID:195555"
                     /db_xref="MGI:MGI:3649940"
     exon            1..343
                     /gene="Pramel11"
                     /gene_synonym="Gm13099; Pramef6"
                     /inference="alignment:Splign:2.1.0"
     CDS             57..1481
                     /gene="Pramel11"
                     /gene_synonym="Gm13099; Pramef6"
                     /note="isoform 1 is encoded by transcript variant 1; PRAME
                     family member 6"
                     /codon_start=1
                     /product="PRAME family member 6 isoform 1"
                     /protein_id="NP_001393669.1"
                     /db_xref="GeneID:195555"
                     /db_xref="MGI:MGI:3649940"
                     /translation="MSFKDPPTLQQLARRSLLKDEALTISALPNLPVQLFPPLFKDAF
                     TSRHPNILRQMVAAWPFPTLPVGALMEIPDLETLKAVLDGLDLLMSQKDRPSRWNLQV
                     LDLRDAHQDFWDGWAGLLHEVCSQDVFGKNQPVGNHPILGEKQTVTIKMNLSLMSRRP
                     SKYLKYLYRWAKERKNGIQVICEKLEFGAIPAYDPLNILKVFDAASIQELAINTRWDI
                     YTLASLAPGVGRMKNLQKLLFKEICIPWDRPWDVEKEALILTEIFSQFSKLHKLQHLY
                     LNDVYFLTERLDQMLRCFESPLETLAITHCTLSESDMRYLSQCPSTHQLKHLDLSGVT
                     FILSHPFLGSLLERLTATLQTLKLKGCMLMDWQISDLLPVLSQCSQLTEVDFVKNFLS
                     MDSLKKLLQHTANLTKLTLEKYPAPNEVYDDSDGVIPDRFVQLCSELMDTLKGVRQPK
                     QVYFVSKMCLYCRNFCIYSFVGNI"
     exon            344..931
                     /gene="Pramel11"
                     /gene_synonym="Gm13099; Pramef6"
                     /inference="alignment:Splign:2.1.0"
     exon            932..2466
                     /gene="Pramel11"
                     /gene_synonym="Gm13099; Pramef6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaaatatt tgttcctttg gttattccct tatcatctgc atatctaaaa gctacaatga
       61 gcttcaagga cccaccaaca ctccagcagc tggcaagaag aagcctgctg aaagatgaag
      121 ccttgaccat ctctgctctg ccgaacctgc ctgtgcaact cttcccacca ctcttcaagg
      181 atgcattcac cagcagacat cctaacatac taaggcagat ggtggcagca tggcctttcc
      241 caacccttcc tgtgggagcc ctgatggaga ttcctgacct ggagaccctt aaagctgtgc
      301 ttgatggcct tgatttgcta atgtcacaaa aggatcgacc tagcaggtgg aacctacaag
      361 tgcttgattt acgagatgcc caccaggact tctgggatgg ttgggctgga ttacttcatg
      421 aagtctgctc tcaagatgtc tttggcaaga accaaccagt gggaaatcat cccatcctag
      481 gggagaaaca gaccgtgact ataaaaatga atctttccct catgtcccgc cgtccctcca
      541 aatacctaaa atatttgtat cggtgggcca aggagagaaa aaatgggata caggtgatct
      601 gtgagaagct ggagtttggg gccattcctg cctatgaccc actgaatatt ttgaaggttt
      661 ttgatgcagc ctcaatccag gaattggcga taaacacacg ctgggatata tatacccttg
      721 catcactagc ccctggcgtg ggccggatga aaaacctcca gaaactcctt ttcaaggaaa
      781 tctgcatacc ttgggatagg ccttgggacg tagagaagga agcccttatt cttacagaga
      841 tcttttccca gttctccaaa ctgcataaac tccagcatct ctatttgaat gatgtctact
      901 ttctgactga acgcctggac caaatgctca ggtgctttga gagtccatta gagacccttg
      961 ctattactca ctgcacactg tcagaatcag atatgaggta tctgtcccag tgtccaagca
     1021 cccaccagct caaacacctg gacctcagtg gtgtcacctt cattttaagc catccattcc
     1081 taggaagcct gctagaaaga ctgacagcta ctctgcagac attaaaattg aaaggctgta
     1141 tgctcatgga ctggcaaatc agtgacctcc tgcctgtgct gagccagtgt tcccagctca
     1201 ctgaagtcga ttttgtgaag aacttcttgt ccatggacag cctgaagaag ctgctgcagc
     1261 atactgccaa cctcacaaag ctgaccctgg agaagtaccc tgcccctaat gaagtctatg
     1321 atgacagtga tggtgttatt ccagacagat ttgtgcaact ttgttctgag cttatggaca
     1381 cactcaaggg tgtaaggcag ccaaagcagg tctactttgt gagtaagatg tgtttatatt
     1441 gtcggaattt ctgtatctat agttttgttg gcaatatata aggtgaggtc attgctaggc
     1501 tctgacaaat ggaaggcagg tctcaagtga ctcattagag gcatagaaca tatgtattca
     1561 agcatttttg gatgtacttt ggaaagataa ttatttcatt ttctttgaat gtcagtcaaa
     1621 ttcttctgat ttgaggtagt tgtgttgaga tggaaaacca tgagcttatt ttcagcctga
     1681 tgtctacagt aaagacccac ccttgaacag caactacatc tgaaaactgt agggctgcat
     1741 cccagcactt tcagagtacg agggaccata gaagtaggga aggggataaa gagagaggac
     1801 attataaaga gcataatgga catgagtagg agggcattgt ttcattatcc ctgtggatgg
     1861 catccaccat ttggctctgc cattaactct gctctacagt atgtggacat atttttatga
     1921 agtataagcc tgcctgactg aatcttggag tattttcgta ttagactgtt attgtagccg
     1981 cctgtggcta tgtgaactgg gttcccatga aaggtgagct ggggctaata gaaatcagac
     2041 atgagaaaag tatgaggtca agacaaactt ttctgttcaa agcctctgaa ggttactgag
     2101 actctgtgct tataaagagg taggcccttc ccctgccagc tcattcttgg tgcctggagc
     2161 cagcccgtag gcgatctaca gggtgtgtcc ctggaatgtc tcaaggacct ttcagcagga
     2221 agcagagtct tggagaagag caaatagagc catcaaggtc agagggctca accctaggta
     2281 atcttcttag tggcagcaag gtcaacgtct ggatcagcct gcttcaaggc tgagggaggc
     2341 tacatgttat cactattaag ctgcagctct ttcttggggg aagtcctgca gcctgatatt
     2401 ttcatttatc accaccatta gcattataat ttgtcatatg ttctaataaa tcagtttcta
     2461 taagaa
//
