LOCUS       NM_172807               2367 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus peptidylprolyl isomerase domain and WD repeat
            containing 1 (Ppwd1), mRNA.
ACCESSION   NM_172807
VERSION     NM_172807.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2367)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC154216.1, AK043316.1 and AK028532.1.
            
            On Aug 8, 2009 this sequence version replaced NM_172807.3.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK028532.1, BC119282.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1                 AC154216.1         24501-24501
            2-22                AK043316.1         2-22
            23-366              AK028532.1         3-346
            367-367             AC154216.1         30177-30177
            368-1195            AK028532.1         348-1175
            1196-1196           AC154216.1         36249-36249
            1197-1408           AK028532.1         1177-1388
            1409-1409           AC154216.1         43565-43565
            1410-1880           AK028532.1         1390-1860
            1881-2367           AC154216.1         47738-48224
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 56.39 cM"
     gene            1..2367
                     /gene="Ppwd1"
                     /gene_synonym="4632422M10Rik; A330090G21Rik"
                     /note="peptidylprolyl isomerase domain and WD repeat
                     containing 1"
                     /db_xref="GeneID:238831"
                     /db_xref="MGI:MGI:2443069"
     exon            1..239
                     /gene="Ppwd1"
                     /gene_synonym="4632422M10Rik; A330090G21Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             44..1984
                     /gene="Ppwd1"
                     /gene_synonym="4632422M10Rik; A330090G21Rik"
                     /EC_number="5.2.1.8"
                     /codon_start=1
                     /product="peptidylprolyl isomerase domain and WD
                     repeat-containing protein 1"
                     /protein_id="NP_766395.2"
                     /db_xref="CCDS:CCDS26748.1"
                     /db_xref="GeneID:238831"
                     /db_xref="MGI:MGI:2443069"
                     /translation="MATESGSDSQLRRRRRRDPEGSEKTELSEREPALAVAGSEENDD
                     ENEERWVGPLPVEATLAKKRKVLEFERVYLDNLPSASMYERSYMHRDVITHVVCTKTD
                     FIITASHDGHVKFWKKIEEGIEFVKHFRSHLGVIESIAVSSEGALFCSVGDDKAMKVF
                     DVVNFDMINMLKLGYFPGQCEWIYCPGDAISSVAASEKSTGKIFIYDGRGDNQPLHIF
                     DKLHVSPLTQIRLNPVYKAVVSSDKSGMIEYWTGPPHEYKFPKNVNWEYKTDTDLYEF
                     AKCKAYPTSICFSPDGKKIATIGSDRKVRIFRFLTGKLMRVFDESLSMFTELQQMRQQ
                     LPDMEFGRRMAVERELEKVDAVRLVNIVFDETGHFVLYGTMLGIKVINVETNRCVRIL
                     GKQENIRVMQLALFQGIAKKHRAAATIEMKASENPVLQNIQADPTIVCTSFKKNRFYM
                     FTKREPEDTKTADSDRDVFNEKPSKEEVMAATQAEGPKRVSDSAIVHTSMGDIHIKLF
                     PVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEF
                     HSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISN
                     VKVNPKTDKPYEDVSIINITVK"
     exon            240..342
                     /gene="Ppwd1"
                     /gene_synonym="4632422M10Rik; A330090G21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            343..443
                     /gene="Ppwd1"
                     /gene_synonym="4632422M10Rik; A330090G21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            444..564
                     /gene="Ppwd1"
                     /gene_synonym="4632422M10Rik; A330090G21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            565..1012
                     /gene="Ppwd1"
                     /gene_synonym="4632422M10Rik; A330090G21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1013..1203
                     /gene="Ppwd1"
                     /gene_synonym="4632422M10Rik; A330090G21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1204..1393
                     /gene="Ppwd1"
                     /gene_synonym="4632422M10Rik; A330090G21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1394..1575
                     /gene="Ppwd1"
                     /gene_synonym="4632422M10Rik; A330090G21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1576..1657
                     /gene="Ppwd1"
                     /gene_synonym="4632422M10Rik; A330090G21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1658..1840
                     /gene="Ppwd1"
                     /gene_synonym="4632422M10Rik; A330090G21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1841..2367
                     /gene="Ppwd1"
                     /gene_synonym="4632422M10Rik; A330090G21Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2349..2354
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ppwd1"
                     /gene_synonym="4632422M10Rik; A330090G21Rik"
                     /note="hexamer: TATAAA"
     polyA_site      2367
                     /gene="Ppwd1"
                     /gene_synonym="4632422M10Rik; A330090G21Rik"
                     /note="major polyA site"
ORIGIN      
        1 tagttcactc ggtcgtcgcg tctcttctaa cgcctcggac gacatggcga ccgagagtgg
       61 gagcgattcg cagctgagga ggagaaggcg ccgagaccca gagggatcag aaaaaacgga
      121 actgagcgag cgagaaccgg ccctggcagt ggcggggagc gaagaaaatg atgatgagaa
      181 tgaagagcgc tgggtcgggc ctttaccggt ggaggcaacc cttgccaaga agaggaaagt
      241 tctggagttc gaaagagtct accttgataa tctccccagt gcatccatgt atgagcgcag
      301 ttacatgcac agagatgtta tcacacatgt ggtatgtacc aaaacagatt ttattatcac
      361 tgccagtcat gatggacatg ttaaattttg gaaaaaaata gaagaaggaa ttgagtttgt
      421 taaacatttt cgtagtcacc ttggagttat tgagagtatt gcagttagct ctgagggagc
      481 gttgttctgc tctgtcggtg atgataaagc gatgaaggtg tttgatgtgg tgaactttga
      541 catgatcaac atgctgaagc tcggctattt tcctggacag tgtgagtgga tatattgccc
      601 aggagatgcc atatcttcag ttgctgcttc tgagaagagt acaggaaaaa ttttcattta
      661 tgatggacga ggagataacc agccacttca tatttttgac aaactccatg tatcccctct
      721 tactcaaata agactaaacc cagtttacaa agcagtggtg tcttctgaca aatccgggat
      781 gattgagtac tggactggac cgccgcacga atataagttc cctaaaaatg tgaactggga
      841 gtataagaca gacacagact tatatgaatt tgccaagtgt aaggcatatc caaccagcat
      901 atgtttttca cctgatggga agaaaatagc aaccattgga tcagacagaa aagttagaat
      961 tttcaggttt ttaactggaa aactcatgag ggtctttgat gaatcattaa gtatgtttac
     1021 tgaactgcag cagatgaggc aacaactacc agacatggaa tttggccgac gaatggctgt
     1081 agaacgtgag ctggagaaag tggatgctgt aagattagtt aacatcgttt ttgatgaaac
     1141 cggacacttc gtgctgtacg gaacgatgct gggcattaaa gtaataaatg tagaaacgaa
     1201 tcggtgtgtg cggatcttag gcaagcaaga aaacattaga gtgatgcagc tagctttgtt
     1261 tcagggaata gccaaaaagc atcgagctgc agctaccata gagatgaaag cttctgaaaa
     1321 tcctgttctt cagaatattc aagctgaccc aacaatagtc tgtacatctt tcaaaaagaa
     1381 tcgcttttat atgtttacca aacgagagcc ggaagataca aaaactgcag attctgacag
     1441 agatgttttt aatgagaaac cttctaaaga agaagtcatg gcagctactc aagctgaagg
     1501 gccgaagcga gtttcagata gtgccattgt ccacacaagc atgggagaca ttcacatcaa
     1561 actttttcct gttgagtgtc ccaagactgt ggaaaacttc tgtgttcata gcagaaatgg
     1621 ttattacaat gggcatacat tccaccgtat aattaagggc ttcatgattc agacaggaga
     1681 tccaacaggt actggtatgg ggggcgaaag catatgggga ggagagtttg aggacgaatt
     1741 ccactcaaca ttacgacatg acagaccgta cacactcagc atggccaatg ctggatcaaa
     1801 taccaacgga tcccagtttt ttataacagt agtaccaacg ccttggcttg ataataagca
     1861 cacggtgttt ggaagagtga ctaaaggcat ggaggttgtg cagaggattt ctaacgttaa
     1921 agtcaacccc aaaaccgata agccttatga ggacgtcagc atcataaata tcactgtcaa
     1981 gtaactgctt ctgttacagt cacaagacag tctataacaa cacaggactg tttcacattg
     2041 ggaagtttaa aacttgctga atatgtaaat catgttttaa aatataaaca ctgtattttt
     2101 gtatttttac ttaaaggcct tttttttttt tttttttttt tttaaaacac tgccttttct
     2161 ggactatttg tgattctcag gggtaacaaa ttgaaatgca ctaaattgag gcaaataaca
     2221 ttcttttata ggtcaattct gttactatga ctcgaatttg gtattaaata atggattctt
     2281 tttaaaaaac ataccctctt atgtttagtg gtccttaaaa agatcaaaag gtatatattc
     2341 cttaatatta taaaattctt tttcaaa
//
