LOCUS       XM_011238773            1762 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus protoporphyrinogen oxidase (Ppox),
            transcript variant X3, mRNA.
ACCESSION   XM_011238773
VERSION     XM_011238773.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000067.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_011238773.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1762
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="1"
     gene            1..1762
                     /gene="Ppox"
                     /gene_synonym="Ppo"
                     /note="protoporphyrinogen oxidase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 7 ESTs, 306 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 44 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:19044"
                     /db_xref="MGI:MGI:104968"
     CDS             395..1696
                     /gene="Ppox"
                     /gene_synonym="Ppo"
                     /codon_start=1
                     /product="protoporphyrinogen oxidase isoform X2"
                     /protein_id="XP_011237075.1"
                     /db_xref="GeneID:19044"
                     /db_xref="MGI:MGI:104968"
                     /translation="MVRSLNLDLEGLGRLEPWEPGPCSWACGEQVSELGLESEVLPVR
                     GDHPAAQNRFLYVGGTLHPLPSGLRGLLRPSPPFSKPLFWAGLRELLKPRGKEPDETV
                     HSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLG
                     AGQSPQPDSSLIRQARAERWSQWSLRGGLEVLPQALHNHLASKGVTVLSGQPVCGLSL
                     QPEGRWKVSLGDSSLEADHIISAIPASELSKLLPAEAAPLARILSTIKAVSVAVVNLQ
                     YRGACLPVQGFGHLVPSSEDPTVLGIVYDSVAFPEQDGNPPSLRVTVMLGGYWLQKLK
                     AAGHQLSPELFQQQAQEAAATQLGLKEPPSHCLVHLHKNCIPQYTIGHWQKLDSAMQF
                     LTAQRLPLTLAGASYEGVAVNDCIESGRQAAVAVLGTESNS"
ORIGIN      
        1 cgccagaaag gaatcgacgg agagtcggag ggaccctaaa agttaggggc ggggatacca
       61 gacttgaacc tgctcacccc tgaggctgga aaaaccgagt gctgtagaat tctggcctcc
      121 gaagggtttg tgctggggag atagcgtggg cgtggccctt atctgcacac ggacaggatg
      181 gactgctcct agggcctcta tcagtcactc actttctcgg gttcccccta tctcgtgggc
      241 cttacgatgg gccggactgt gatagtactt ggcggaggta tcagtggatt ggccgcaagt
      301 tatcatctga tccgaggccc cagtcctcct aaggtgatct tagtggaggg cagcaagcgt
      361 ttgggaggat ggatccgctc aatccgagga tcagatggtg cgatctttga acttggacct
      421 cgagggatta ggccggctgg agccctggga gcccggaccc tgctcctggg cttgtggaga
      481 acaggtttct gaacttggct tggagtctga agtcttgcct gtccgagggg atcacccagc
      541 tgcccagaac aggttcctgt atgtaggcgg taccctgcac cctctaccct ccggcctcag
      601 ggggctactc cgtccttcac cccccttctc aaaacctctg ttttgggctg ggctgaggga
      661 gttgctgaag cccaggggca aagagcctga tgaaactgtg cacagttttg cccagcgccg
      721 ccttggacct gaggtggcat ctttagccat ggacagtctt tgccgaggag tatttgctgg
      781 caacagccgg gagctcagca tccggtcctg ctttcccagt ctcttccaag ctgaacaaac
      841 ccaccggtcc atattgctgg ggctgctgct gggcgcagga cagagtcccc agccggattc
      901 ctcactaatt cgtcaggccc gggctgagcg atggagccag tggtcactcc gtggagggct
      961 ggaggtgttg ccccaggctc ttcacaatca cctagcaagt aaaggggtca ctgtcctcag
     1021 tgggcagcca gtctgtgggc tcagccttca gccagaaggg cgctggaagg tgtctctagg
     1081 ggacagcagt ctggaggctg accacattat aagtgccatt ccagcttcag agctcagcaa
     1141 gctgctccct gccgaggctg cacctctagc tcgaatcctg agtaccatca aggcagtgtc
     1201 tgttgctgtg gtgaatctgc agtaccgagg agcttgtctg cctgtccagg gatttggaca
     1261 tttggtgcca tcgtcagaag acccgactgt cctgggaatt gtgtacgact cggtggcttt
     1321 tcctgaacag gatgggaacc ccccaagcct cagagtgact gtgatgttgg gaggttactg
     1381 gctacagaag ctaaaagctg cgggccacca actgtctcca gagctgttcc agcaacaagc
     1441 ccaggaggca gccgccacac agttaggact gaaagaacca ccgagtcact gcctggtcca
     1501 tctacacaag aactgtatcc ctcagtatac aataggccac tggcaaaaac tagactcagc
     1561 tatgcaattc ctgacggccc agaggttgcc cctgactttg gctggagcct cctatgaggg
     1621 ggttgctgtc aatgactgta tagagagtgg gcgccaggca gcagttgctg tcctgggcac
     1681 agaatctaac agctgacaag ccccctgtcc cgtccccacc cccactttcc tactcatgaa
     1741 agtaaaagtt ggtagagctt gg
//
