LOCUS       NM_028430               1062 bp    mRNA    linear   ROD 13-JUN-2024
DEFINITION  Mus musculus peptidylprolyl isomerase (cyclophilin)-like 6 (Ppil6),
            transcript variant 1, mRNA.
ACCESSION   NM_028430 XM_891672 XM_908345
VERSION     NM_028430.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1062)
  AUTHORS   McClintock,T.S., Glasser,C.E., Bose,S.C. and Bergman,D.A.
  TITLE     Tissue expression patterns identify mouse cilia genes
  JOURNAL   Physiol Genomics 32 (2), 198-206 (2008)
   PUBMED   17971504
  REMARK    GeneRIF: Ppil6 is most abundantly expressed in tissues rich in
            highly ciliated cells, such as olfactory sensory neurons, and is
            predicted to be important to cilia.
REFERENCE   2  (bases 1 to 1062)
  AUTHORS   Nishimura,M., Yokoi,N., Miki,T., Horikawa,Y., Yoshioka,H.,
            Takeda,J., Ohara,O. and Seino,S.
  TITLE     Construction of a multi-functional cDNA library specific for mouse
            pancreatic islets and its application to microarray
  JOURNAL   DNA Res 11 (5), 315-323 (2004)
   PUBMED   15747579
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC153360.6 and AC132290.3.
            
            On Jun 8, 2022 this sequence version replaced NM_028430.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC147757.1, AK013818.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-173               AC153360.6         214932-215104
            174-269             AC153360.6         219002-219097
            270-458             AC153360.6         222845-223033
            459-521             AC153360.6         226108-226170
            522-669             AC153360.6         226267-226414
            670-726             AC153360.6         227479-227535
            727-862             AC153360.6         231907-232042
            863-1062            AC132290.3         62449-62648
FEATURES             Location/Qualifiers
     source          1..1062
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 22.43 cM"
     gene            1..1062
                     /gene="Ppil6"
                     /gene_synonym="2900084F20Rik"
                     /note="peptidylprolyl isomerase (cyclophilin)-like 6"
                     /db_xref="GeneID:73075"
                     /db_xref="MGI:MGI:1920325"
     exon            1..173
                     /gene="Ppil6"
                     /gene_synonym="2900084F20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            174..269
                     /gene="Ppil6"
                     /gene_synonym="2900084F20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            270..458
                     /gene="Ppil6"
                     /gene_synonym="2900084F20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            459..521
                     /gene="Ppil6"
                     /gene_synonym="2900084F20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            522..669
                     /gene="Ppil6"
                     /gene_synonym="2900084F20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            670..726
                     /gene="Ppil6"
                     /gene_synonym="2900084F20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            727..862
                     /gene="Ppil6"
                     /gene_synonym="2900084F20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            863..1062
                     /gene="Ppil6"
                     /gene_synonym="2900084F20Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1042..1047
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Ppil6"
                     /gene_synonym="2900084F20Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      1062
                     /gene="Ppil6"
                     /gene_synonym="2900084F20Rik"
                     /note="major polyA site"
ORIGIN      
        1 atttgtgttc cgggctctct gctgtccctg ccatggccac ccagcagccg tgccggccca
       61 agtcgaagcc cccagcatgt cacgtgcggt tgccgcccga gccgcccctg aagctgaagg
      121 tggtggggct cttcaaaagc tccagctttc aggtgtcaaa gaccatcgct gagactttga
      181 aaaccagcta cccgtacaga tttgaagatc cggtgatagt tcctcttcaa gagtttgctt
      241 gggatcagtt tctggaggag aagaagaggg aactgaaggg tgaaacctgg gtctattcct
      301 cctatgtgat gtgttttgtt aatgatcaac tcctgggtaa cgcatttgat ctgaagaagt
      361 gggcccagaa ggtgtgggat gtgatcgatg tccggccctc cgctctgtat gaggcgctga
      421 ctctggacta tgccacgaag ttcttaaaag acaccaagca tgattttgtg tacttggaca
      481 tttgtattga tctttctcca attggaagac tgatttttga gctgtattgt gatgcatgtc
      541 ccagaacatg tacaaatttt caggtcttgt gcacaggaac gtcaggattt tctgagagag
      601 gcacaaagct tcattacaaa gattcgattt ttcatcgagt agttcagaat ggttggatac
      661 aaggaggaga tatagtacag gggcgcggag acgacggaga gtctatttat ggaccaacgt
      721 ttgaagatga aaacttctcg attcctcaca ataagagggg agttcttgga atggtcaata
      781 agggccatca caccaatggg tcacaattct acatcacact acaggcagct ccctacttgg
      841 ataaaaaata tgtggctttt gggcaactaa tcgaaggaac ccacgttctt aagcaactag
      901 aattagtccc aacagagaac gaaagaccat tgcttctttg cagtattgca gacagtggag
      961 ttctttacac atgattttca taccactctc attttctgtg gtgccttatt gctgtgcatt
     1021 tgatcagctg ttttatattt aattaaatgg tgcttgataa ca
//
